Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11m06
(649 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC008993-1|AAH08993.1| 275|Homo sapiens chromosome 9 open readi... 40 0.006
AY598327-1|AAT06738.1| 275|Homo sapiens L8 protein. 40 0.006
AL353805-6|CAI12542.1| 275|Homo sapiens chromosome 9 open readi... 40 0.006
AL353805-5|CAI12541.1| 181|Homo sapiens chromosome 9 open readi... 40 0.006
AL353805-4|CAI12540.1| 159|Homo sapiens chromosome 9 open readi... 40 0.006
AL353805-3|CAI12539.1| 134|Homo sapiens chromosome 9 open readi... 40 0.006
BX649632-1|CAI18774.1| 334|Homo sapiens WD repeat domain 5 prot... 30 8.2
BC001635-1|AAH01635.1| 334|Homo sapiens WD repeat domain 5 prot... 30 8.2
AK000552-1|BAA91248.1| 334|Homo sapiens protein ( Homo sapiens ... 30 8.2
AJ011376-1|CAB66159.1| 362|Homo sapiens hypothetical protein pr... 30 8.2
>BC008993-1|AAH08993.1| 275|Homo sapiens chromosome 9 open reading
frame 30 protein.
Length = 275
Score = 40.3 bits (90), Expect = 0.006
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 229 ETMILAELVAAKKH-FNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRTPSQLRLKWEN 405
E IL LV K+ K ++AR LK++ WQ L +++NS R QL+ WEN
Sbjct: 17 EKSILLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQPSVSLRDFKQLKKCWEN 76
Query: 406 LKNAT 420
+K T
Sbjct: 77 IKART 81
>AY598327-1|AAT06738.1| 275|Homo sapiens L8 protein.
Length = 275
Score = 40.3 bits (90), Expect = 0.006
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 229 ETMILAELVAAKKH-FNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRTPSQLRLKWEN 405
E IL LV K+ K ++AR LK++ WQ L +++NS R QL+ WEN
Sbjct: 17 EKSILLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQPSVSLRDFKQLKKCWEN 76
Query: 406 LKNAT 420
+K T
Sbjct: 77 IKART 81
>AL353805-6|CAI12542.1| 275|Homo sapiens chromosome 9 open reading
frame 30 protein.
Length = 275
Score = 40.3 bits (90), Expect = 0.006
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 229 ETMILAELVAAKKH-FNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRTPSQLRLKWEN 405
E IL LV K+ K ++AR LK++ WQ L +++NS R QL+ WEN
Sbjct: 17 EKSILLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQPSVSLRDFKQLKKCWEN 76
Query: 406 LKNAT 420
+K T
Sbjct: 77 IKART 81
>AL353805-5|CAI12541.1| 181|Homo sapiens chromosome 9 open reading
frame 30 protein.
Length = 181
Score = 40.3 bits (90), Expect = 0.006
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 229 ETMILAELVAAKKH-FNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRTPSQLRLKWEN 405
E IL LV K+ K ++AR LK++ WQ L +++NS R QL+ WEN
Sbjct: 17 EKSILLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQPSVSLRDFKQLKKCWEN 76
Query: 406 LKNAT 420
+K T
Sbjct: 77 IKART 81
>AL353805-4|CAI12540.1| 159|Homo sapiens chromosome 9 open reading
frame 30 protein.
Length = 159
Score = 40.3 bits (90), Expect = 0.006
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 229 ETMILAELVAAKKH-FNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRTPSQLRLKWEN 405
E IL LV K+ K ++AR LK++ WQ L +++NS R QL+ WEN
Sbjct: 17 EKSILLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQPSVSLRDFKQLKKCWEN 76
Query: 406 LKNAT 420
+K T
Sbjct: 77 IKART 81
>AL353805-3|CAI12539.1| 134|Homo sapiens chromosome 9 open reading
frame 30 protein.
Length = 134
Score = 40.3 bits (90), Expect = 0.006
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +1
Query: 229 ETMILAELVAAKKH-FNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRTPSQLRLKWEN 405
E IL LV K+ K ++AR LK++ WQ L +++NS R QL+ WEN
Sbjct: 17 EKSILLALVEKYKYVLECKKSDARTIALKQRTWQALAHEYNSQPSVSLRDFKQLKKCWEN 76
Query: 406 LKNAT 420
+K T
Sbjct: 77 IKART 81
>BX649632-1|CAI18774.1| 334|Homo sapiens WD repeat domain 5
protein.
Length = 334
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 4 CLSTILDDDLPPKRFKTFVYNSKCV 78
CL T++DDD PP F F N K +
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYI 229
>BC001635-1|AAH01635.1| 334|Homo sapiens WD repeat domain 5
protein.
Length = 334
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 4 CLSTILDDDLPPKRFKTFVYNSKCV 78
CL T++DDD PP F F N K +
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYI 229
>AK000552-1|BAA91248.1| 334|Homo sapiens protein ( Homo sapiens
cDNA FLJ20545 fis, clone KAT11476. ).
Length = 334
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 4 CLSTILDDDLPPKRFKTFVYNSKCV 78
CL T++DDD PP F F N K +
Sbjct: 205 CLKTLIDDDNPPVSFVKFSPNGKYI 229
>AJ011376-1|CAB66159.1| 362|Homo sapiens hypothetical protein
protein.
Length = 362
Score = 29.9 bits (64), Expect = 8.2
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +1
Query: 4 CLSTILDDDLPPKRFKTFVYNSKCV 78
CL T++DDD PP F F N K +
Sbjct: 233 CLKTLIDDDNPPVSFVKFSPNGKYI 257
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,247,844
Number of Sequences: 237096
Number of extensions: 1533626
Number of successful extensions: 2512
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2512
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -