Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11m06
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr...    30   1.6  
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr...    30   1.6  
AC006661-6|AAF39889.1|  312|Caenorhabditis elegans Hypothetical ...    28   5.0  
Z37139-8|CAA85487.1|  376|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U70857-7|AAB09170.1|  208|Caenorhabditis elegans Hypothetical pr...    28   6.6  

>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical
           protein F13B9.1c protein.
          Length = 1609

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +3

Query: 129 NYIDNNNFTLKTLSSSLENISFSVKKGSTHDKR*DDDSSRTCGGEKT 269
           N   N +  L T  S LE I+ S  K    +KR    S  T G EKT
Sbjct: 399 NLSQNTSIVLNTTDSPLEAIATSTPKEIKPEKRSSVSSQGTIGAEKT 445


>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical
           protein F13B9.1b protein.
          Length = 1614

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +3

Query: 129 NYIDNNNFTLKTLSSSLENISFSVKKGSTHDKR*DDDSSRTCGGEKT 269
           N   N +  L T  S LE I+ S  K    +KR    S  T G EKT
Sbjct: 399 NLSQNTSIVLNTTDSPLEAIATSTPKEIKPEKRSSVSSQGTIGAEKT 445


>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical
           protein F13B9.1a protein.
          Length = 1632

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 18/47 (38%), Positives = 21/47 (44%)
 Frame = +3

Query: 129 NYIDNNNFTLKTLSSSLENISFSVKKGSTHDKR*DDDSSRTCGGEKT 269
           N   N +  L T  S LE I+ S  K    +KR    S  T G EKT
Sbjct: 399 NLSQNTSIVLNTTDSPLEAIATSTPKEIKPEKRSSVSSQGTIGAEKT 445


>AC006661-6|AAF39889.1|  312|Caenorhabditis elegans Hypothetical
           protein H20J04.3 protein.
          Length = 312

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
 Frame = +1

Query: 250 LVAAKKH----FNNKATNARNNKLKEQAWQTLVNDFNSSIRRFPRTPSQLRLKWENLKN 414
           L+ A +H    F+N     RN + K + WQ LV     ++  F   P  L  +W+ L++
Sbjct: 10  LIEAVRHSRCLFDNTDRQYRNTEYKNRVWQRLV-----TVLGFDGDPRMLSARWKQLRD 63


>Z37139-8|CAA85487.1|  376|Caenorhabditis elegans Hypothetical
           protein C14B1.4 protein.
          Length = 376

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
 Frame = +1

Query: 4   CLSTILDDDLPPKRFKTFVYNSKCVY--N*RATVK*NEFCK 120
           C+ T++DD+ PP  F  F  N K +   N  +T+K  +F K
Sbjct: 247 CIKTLVDDENPPVAFVKFSPNGKYILASNLDSTLKLWDFSK 287


>U70857-7|AAB09170.1|  208|Caenorhabditis elegans Hypothetical
           protein C10G8.2 protein.
          Length = 208

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/33 (39%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = -3

Query: 641 GCKSVKNIICDLQQCA--CFIQNFICNPYHLQP 549
           GCK  +N    LQ+CA  C   N+   P+H  P
Sbjct: 60  GCKDQENKFDSLQECASTCLKSNYKGCPFHRNP 92


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,725,695
Number of Sequences: 27780
Number of extensions: 270072
Number of successful extensions: 677
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 671
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)