Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11m04
         (734 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    23   2.6  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    23   2.6  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    23   2.6  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    22   4.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.9  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.8  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.8  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +2

Query: 314 TNT*MFYEDLRNFRYQLSSGDFTMSKAHLYHCNIAPVIRQPP 439
           TN+ M Y+ L  ++ +   GD  M + H+ H N++ V +  P
Sbjct: 153 TNSCMEYQHLHRYKEEALQGDGRM-RQHVMH-NLSSVPQPQP 192


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +2

Query: 314 TNT*MFYEDLRNFRYQLSSGDFTMSKAHLYHCNIAPVIRQPP 439
           TN+ M Y+ L  ++ +   GD  M + H+ H N++ V +  P
Sbjct: 153 TNSCMEYQHLHRYKEEALQGDGRM-RQHVMH-NLSSVPQPQP 192


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +2

Query: 314 TNT*MFYEDLRNFRYQLSSGDFTMSKAHLYHCNIAPVIRQPP 439
           TN+ M Y+ L  ++ +   GD  M + H+ H N++ V +  P
Sbjct: 153 TNSCMEYQHLHRYKEEALQGDGRM-RQHVMH-NLSSVPQPQP 192


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 584 EKYDQICKINIAFVCIIYTSTFYSIVNATHM 676
           EKY + C+I   F+  IY  T  +     H+
Sbjct: 32  EKYRKFCRILKYFIIAIYVLTILTSSVTLHV 62


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +3

Query: 72   FRSDIHHAFKESGYLIA 122
            F  ++H AFK  G+L++
Sbjct: 1968 FVKELHEAFKPKGWLLS 1984


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/22 (36%), Positives = 9/22 (40%)
 Frame = -1

Query: 509 MNQHSIQTAGSCRMFSVECHSK 444
           M  H      +C M  VEC  K
Sbjct: 490 MGYHGFHNPFTCNMCGVECSDK 511


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = +1

Query: 34  IFFKFKLVHCLNYFAPIFIT 93
           +FFK   ++C NY+  +  T
Sbjct: 68  MFFKEASLYCFNYYVIVVTT 87


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 174,002
Number of Sequences: 336
Number of extensions: 3863
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)