Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11m04
         (734 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid p...    25   0.98 
AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatas...    25   0.98 
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    24   1.7  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    24   1.7  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    24   1.7  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    23   3.9  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   3.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.1  

>DQ058012-1|AAY57281.1|  373|Apis mellifera venom allergen acid
           phosphatase protein.
          Length = 373

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -3

Query: 582 NSMFRAGREQPGTKLEQVIKAKQLYESAFHPDSGELQNVFGRMSFQM 442
           N +FR G   P  K E   K   LY   +  + GEL N      +Q+
Sbjct: 6   NVIFRHGDRIPDEKNEMYPKDPYLYYDFYPLERGELTNSGKMREYQL 52


>AY939855-1|AAX33235.1|  388|Apis mellifera venom acid phosphatase
           precursor protein.
          Length = 388

 Score = 24.6 bits (51), Expect = 0.98
 Identities = 15/47 (31%), Positives = 20/47 (42%)
 Frame = -3

Query: 582 NSMFRAGREQPGTKLEQVIKAKQLYESAFHPDSGELQNVFGRMSFQM 442
           N +FR G   P  K E   K   LY   +  + GEL N      +Q+
Sbjct: 21  NVIFRHGDRIPDEKNEMYPKDPYLYYDFYPLERGELTNSGKMREYQL 67


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 440 GIWNDILPKTFCSSPLSGWN 499
           G+W  IL     S PL+GWN
Sbjct: 159 GVW--ILSGAISSPPLAGWN 176


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 440 GIWNDILPKTFCSSPLSGWN 499
           G+W  IL     S PL+GWN
Sbjct: 159 GVW--ILSGAISSPPLAGWN 176


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.8 bits (49), Expect = 1.7
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = +2

Query: 440 GIWNDILPKTFCSSPLSGWN 499
           G+W  IL     S PL+GWN
Sbjct: 159 GVW--ILSGAISSPPLAGWN 176


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 196 CLFYLSSVIPVVKITIFTSNL 134
           C+F  + VIP++ I +F S L
Sbjct: 223 CIFIWAYVIPLIFIILFYSRL 243


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 22.6 bits (46), Expect = 3.9
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = -2

Query: 196 CLFYLSSVIPVVKITIFTSNL 134
           C+F  + VIP++ I +F S L
Sbjct: 223 CIFIWAYVIPLIFIILFYSRL 243


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/35 (25%), Positives = 16/35 (45%)
 Frame = +3

Query: 252 NLLIYLMVTSENY*DIVSVSRQIHKCFMKT*EIFG 356
           N   Y    +  + + V  +  +HKCFM+   + G
Sbjct: 536 NTFCYFRRNAATWKNAVRHNLSLHKCFMRVENVKG 570


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,429
Number of Sequences: 438
Number of extensions: 4438
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22901220
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)