Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11m03
         (672 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    27   0.18 
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    23   2.3  
AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock prote...    22   5.3  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   6.9  
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   9.2  

>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 26.6 bits (56), Expect = 0.18
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
 Frame = +2

Query: 131 LLEDQNNIKLENYATIRMTKLMEWISLCSAFFAVWYSL--IGGYVKHPLIQENMHQIVLS 304
           L + ++NI +   +      +  WI LC+ F A   SL  I   +K  + Q+N    +  
Sbjct: 95  LKKTKSNIFILKESVDTFNDIFGWIILCNIFEAAAKSLIYIDMIIKKNVTQQNSDVFIFD 154

Query: 305 PIYFLILF-GLYSVSVILFRVL 367
            ++  IL+ G+ S   +   +L
Sbjct: 155 NVWLFILWVGILSTIFLCDTIL 176


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 11/29 (37%), Positives = 16/29 (55%)
 Frame = -2

Query: 272 LMDV*RSLLLENTKRRKMLNRGISIPLVL 186
           L D+     L+  KR +  N G+ IPLV+
Sbjct: 425 LHDLWGEFTLKALKRLERANNGVKIPLVI 453


>AY769608-1|AAV40984.1|  195|Tribolium castaneum heat shock protein
           70 protein.
          Length = 195

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 8/18 (44%), Positives = 16/18 (88%)
 Frame = +2

Query: 383 EEAAKELQREIIEAKKDL 436
           ++A ++L+RE+ +AK+DL
Sbjct: 84  KKALQKLRREVEKAKRDL 101


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -1

Query: 600 ILTEANERMFIVNFLNTPRVKNYQIPYFL 514
           IL  A E +FIV    T  VK+ +I +FL
Sbjct: 79  ILEIAFEVIFIVTVWMTGAVKHSKIAHFL 107


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.0 bits (42), Expect = 9.2
 Identities = 10/55 (18%), Positives = 25/55 (45%)
 Frame = +2

Query: 167 YATIRMTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFG 331
           ++T    +++  +  C     +     G ++  P ++ N+ ++    IYF  +FG
Sbjct: 102 FSTFAGIEVLHVVKQCYHLQKINVQQSGIFINLPFLEHNLIRLKNCVIYFNRIFG 156


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,676
Number of Sequences: 336
Number of extensions: 3377
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17489640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)