BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= bmov11m03 (672 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value BC104481-1|AAI04482.1| 113|Homo sapiens DPM3 protein protein. 70 7e-12 BC065233-1|AAH65233.1| 106|Homo sapiens DPM3 protein protein. 70 7e-12 BC104203-1|AAI04204.1| 122|Homo sapiens dolichyl-phosphate mann... 68 4e-11 BC104202-1|AAI04203.1| 122|Homo sapiens dolichyl-phosphate mann... 68 4e-11 BC032223-1|AAH32223.2| 94|Homo sapiens DPM3 protein protein. 68 4e-11 AL691442-11|CAI15326.1| 122|Homo sapiens dolichyl-phosphate man... 68 4e-11 AF312922-1|AAK28487.1| 122|Homo sapiens prostin 1 long isoform ... 68 4e-11 AL691442-10|CAI15325.1| 92|Homo sapiens dolichyl-phosphate man... 67 6e-11 AF312923-1|AAK28486.1| 92|Homo sapiens prostin 1 short isoform... 67 6e-11 AB028128-1|BAA96291.1| 92|Homo sapiens dolichol-phosphate-mann... 66 1e-10 >BC104481-1|AAI04482.1| 113|Homo sapiens DPM3 protein protein. Length = 113 Score = 70.1 bits (164), Expect = 7e-12 Identities = 35/99 (35%), Positives = 56/99 (56%) Frame = +2 Query: 161 ENYATIRMTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYS 340 E + + MTKL +W+ + + W +L G + L + P Y L+ G Y+ Sbjct: 15 ETWGRVTMTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYA 74 Query: 341 VSVILFRVLTFNNCEEAAKELQREIIEAKKDLHERGLRW 457 + + +RV TF++CE+AA+ELQ +I EA+ DL RGLR+ Sbjct: 75 LGTVGYRVATFHDCEDAARELQSQIQEARADLARRGLRF 113 >BC065233-1|AAH65233.1| 106|Homo sapiens DPM3 protein protein. Length = 106 Score = 70.1 bits (164), Expect = 7e-12 Identities = 35/99 (35%), Positives = 56/99 (56%) Frame = +2 Query: 161 ENYATIRMTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYS 340 E + + MTKL +W+ + + W +L G + L + P Y L+ G Y+ Sbjct: 8 ETWGRVTMTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYA 67 Query: 341 VSVILFRVLTFNNCEEAAKELQREIIEAKKDLHERGLRW 457 + + +RV TF++CE+AA+ELQ +I EA+ DL RGLR+ Sbjct: 68 LGTVGYRVATFHDCEDAARELQSQIQEARADLARRGLRF 106 >BC104203-1|AAI04204.1| 122|Homo sapiens dolichyl-phosphate mannosyltransferase polypeptide 3 protein. Length = 122 Score = 67.7 bits (158), Expect = 4e-11 Identities = 34/94 (36%), Positives = 54/94 (57%) Frame = +2 Query: 176 IRMTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVIL 355 + MTKL +W+ + + W +L G + L + P Y L+ G Y++ + Sbjct: 29 VTMTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVG 88 Query: 356 FRVLTFNNCEEAAKELQREIIEAKKDLHERGLRW 457 +RV TF++CE+AA+ELQ +I EA+ DL RGLR+ Sbjct: 89 YRVATFHDCEDAARELQSQIQEARADLARRGLRF 122 >BC104202-1|AAI04203.1| 122|Homo sapiens dolichyl-phosphate mannosyltransferase polypeptide 3 protein. Length = 122 Score = 67.7 bits (158), Expect = 4e-11 Identities = 34/94 (36%), Positives = 54/94 (57%) Frame = +2 Query: 176 IRMTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVIL 355 + MTKL +W+ + + W +L G + L + P Y L+ G Y++ + Sbjct: 29 VTMTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVG 88 Query: 356 FRVLTFNNCEEAAKELQREIIEAKKDLHERGLRW 457 +RV TF++CE+AA+ELQ +I EA+ DL RGLR+ Sbjct: 89 YRVATFHDCEDAARELQSQIQEARADLARRGLRF 122 >BC032223-1|AAH32223.2| 94|Homo sapiens DPM3 protein protein. Length = 94 Score = 67.7 bits (158), Expect = 4e-11 Identities = 34/94 (36%), Positives = 54/94 (57%) Frame = +2 Query: 176 IRMTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVIL 355 + MTKL +W+ + + W +L G + L + P Y L+ G Y++ + Sbjct: 1 VTMTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVG 60 Query: 356 FRVLTFNNCEEAAKELQREIIEAKKDLHERGLRW 457 +RV TF++CE+AA+ELQ +I EA+ DL RGLR+ Sbjct: 61 YRVATFHDCEDAARELQSQIQEARADLARRGLRF 94 >AL691442-11|CAI15326.1| 122|Homo sapiens dolichyl-phosphate mannosyltransferase polypeptide 3 protein. Length = 122 Score = 67.7 bits (158), Expect = 4e-11 Identities = 34/94 (36%), Positives = 54/94 (57%) Frame = +2 Query: 176 IRMTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVIL 355 + MTKL +W+ + + W +L G + L + P Y L+ G Y++ + Sbjct: 29 VTMTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVG 88 Query: 356 FRVLTFNNCEEAAKELQREIIEAKKDLHERGLRW 457 +RV TF++CE+AA+ELQ +I EA+ DL RGLR+ Sbjct: 89 YRVATFHDCEDAARELQSQIQEARADLARRGLRF 122 >AF312922-1|AAK28487.1| 122|Homo sapiens prostin 1 long isoform protein. Length = 122 Score = 67.7 bits (158), Expect = 4e-11 Identities = 34/94 (36%), Positives = 54/94 (57%) Frame = +2 Query: 176 IRMTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVIL 355 + MTKL +W+ + + W +L G + L + P Y L+ G Y++ + Sbjct: 29 VTMTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVG 88 Query: 356 FRVLTFNNCEEAAKELQREIIEAKKDLHERGLRW 457 +RV TF++CE+AA+ELQ +I EA+ DL RGLR+ Sbjct: 89 YRVATFHDCEDAARELQSQIQEARADLARRGLRF 122 >AL691442-10|CAI15325.1| 92|Homo sapiens dolichyl-phosphate mannosyltransferase polypeptide 3 protein. Length = 92 Score = 66.9 bits (156), Expect = 6e-11 Identities = 34/92 (36%), Positives = 53/92 (57%) Frame = +2 Query: 182 MTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVILFR 361 MTKL +W+ + + W +L G + L + P Y L+ G Y++ + +R Sbjct: 1 MTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVGYR 60 Query: 362 VLTFNNCEEAAKELQREIIEAKKDLHERGLRW 457 V TF++CE+AA+ELQ +I EA+ DL RGLR+ Sbjct: 61 VATFHDCEDAARELQSQIQEARADLARRGLRF 92 >AF312923-1|AAK28486.1| 92|Homo sapiens prostin 1 short isoform protein. Length = 92 Score = 66.9 bits (156), Expect = 6e-11 Identities = 34/92 (36%), Positives = 53/92 (57%) Frame = +2 Query: 182 MTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVILFR 361 MTKL +W+ + + W +L G + L + P Y L+ G Y++ + +R Sbjct: 1 MTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVGYR 60 Query: 362 VLTFNNCEEAAKELQREIIEAKKDLHERGLRW 457 V TF++CE+AA+ELQ +I EA+ DL RGLR+ Sbjct: 61 VATFHDCEDAARELQSQIQEARADLARRGLRF 92 >AB028128-1|BAA96291.1| 92|Homo sapiens dolichol-phosphate-mannose synthase protein. Length = 92 Score = 65.7 bits (153), Expect = 1e-10 Identities = 33/92 (35%), Positives = 53/92 (57%) Frame = +2 Query: 182 MTKLMEWISLCSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVILFR 361 MTKL +W+ + + W +L G + L + P Y L+ G Y++ + +R Sbjct: 1 MTKLAQWLWGLAILGSTWVALTTGALGLELPLSCQEVLWPLPAYLLVSAGCYALGTVGYR 60 Query: 362 VLTFNNCEEAAKELQREIIEAKKDLHERGLRW 457 V TF++CE+AA+ELQ +I EA+ DL RG+R+ Sbjct: 61 VATFHDCEDAARELQSQIQEARADLARRGVRF 92 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 87,289,234 Number of Sequences: 237096 Number of extensions: 1631700 Number of successful extensions: 6040 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 5927 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 6029 length of database: 76,859,062 effective HSP length: 87 effective length of database: 56,231,710 effective search space used: 7647512560 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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