Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11m03
         (672 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z70684-9|CAA94605.1|   95|Caenorhabditis elegans Hypothetical pr...    45   4e-05
U64835-1|AAO25997.1|  335|Caenorhabditis elegans Serpentine rece...    32   0.43 
AF106583-5|AAD03136.1|  301|Caenorhabditis elegans Hypothetical ...    30   1.3  
Z78017-2|CAD44160.1|  615|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z73976-10|CAD44151.1|  615|Caenorhabditis elegans Hypothetical p...    28   6.9  
Z81015-2|CAB02660.1|  411|Caenorhabditis elegans Hypothetical pr...    27   9.2  
U40800-10|AAA81495.2|  186|Caenorhabditis elegans Hypothetical p...    27   9.2  

>Z70684-9|CAA94605.1|   95|Caenorhabditis elegans Hypothetical
           protein F28D1.11 protein.
          Length = 95

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 23/59 (38%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
 Frame = +2

Query: 272 IQENMHQIVLSPIYFLILF-GLYSVSVILFRVLTFNNCEEAAKELQREIIEAKKDLHER 445
           + E +H +V    +F +LF G+Y+V  +++ V TFN+C EA  EL  EI EA+++L  +
Sbjct: 33  LPECLHCLVNYAPFFAVLFLGIYAVFNVVYGVATFNDCAEAKVELLGEIKEAREELKRK 91


>U64835-1|AAO25997.1|  335|Caenorhabditis elegans Serpentine
           receptor, class g (gamma)protein 28 protein.
          Length = 335

 Score = 31.9 bits (69), Expect = 0.43
 Identities = 29/115 (25%), Positives = 51/115 (44%)
 Frame = +2

Query: 32  TCNFSILNTYMYK*TNYVIENNVLNFGCSL**NLLEDQNNIKLENYATIRMTKLMEWISL 211
           T  F +LNT  ++ T+YV         C     LL+D + I    Y +    +L + +S 
Sbjct: 76  TLYFLVLNTSFFRVTSYVRPV------CEFLVPLLKDPSYILTPFYTSYMYAQLAKMLST 129

Query: 212 CSAFFAVWYSLIGGYVKHPLIQENMHQIVLSPIYFLILFGLYSVSVILFRVLTFN 376
             A     Y+ +   V+H +I        ++ I+ + LFG++ V++     L FN
Sbjct: 130 L-AMSINRYTSVNNPVQHKMIWMKYSSKAIALIFIIPLFGVWPVAIGNTSFLPFN 183


>AF106583-5|AAD03136.1|  301|Caenorhabditis elegans Hypothetical
           protein F23C8.8 protein.
          Length = 301

 Score = 30.3 bits (65), Expect = 1.3
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +2

Query: 257 VKHPLIQENMHQIVLSPIYFLILFGLYSVSVILFRVLTFNNCEE--AAKELQREIIEAKK 430
           V+HP I   +     +P  F+I+   Y    +L  +L     +E   A  L R++IEA  
Sbjct: 79  VRHPHIARCLAITRPAPTKFVIISDYYERGTLLEWILQKKRLKEHPLAATLFRQLIEAIN 138

Query: 431 DLHERGL 451
            LH+RG+
Sbjct: 139 YLHKRGI 145


>Z78017-2|CAD44160.1|  615|Caenorhabditis elegans Hypothetical
           protein T07C12.12 protein.
          Length = 615

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -1

Query: 453 LKPLSCKSFLASIISLCNSFAASSQLLNVKTLKSMTLTEYKPKSIRKYMGDKT 295
           LK  +CK     ++   NSF    Q   +  +KS+ L+  K + ++  M   T
Sbjct: 184 LKRNNCKVLGGQVLPQLNSFVPVDQYARLLGIKSLNLSAKKKEEVKTTMNSNT 236


>Z73976-10|CAD44151.1|  615|Caenorhabditis elegans Hypothetical
           protein T07C12.12 protein.
          Length = 615

 Score = 27.9 bits (59), Expect = 6.9
 Identities = 14/53 (26%), Positives = 24/53 (45%)
 Frame = -1

Query: 453 LKPLSCKSFLASIISLCNSFAASSQLLNVKTLKSMTLTEYKPKSIRKYMGDKT 295
           LK  +CK     ++   NSF    Q   +  +KS+ L+  K + ++  M   T
Sbjct: 184 LKRNNCKVLGGQVLPQLNSFVPVDQYARLLGIKSLNLSAKKKEEVKTTMNSNT 236


>Z81015-2|CAB02660.1|  411|Caenorhabditis elegans Hypothetical
           protein C11E4.3 protein.
          Length = 411

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +1

Query: 472 RF*MYVCVCICLIKQKIWYLVVFYS 546
           RF +YVCVC+C +   + +   F+S
Sbjct: 378 RFYVYVCVCVCAVLHFLPHSFSFFS 402


>U40800-10|AAA81495.2|  186|Caenorhabditis elegans Hypothetical
           protein D2096.2a protein.
          Length = 186

 Score = 27.5 bits (58), Expect = 9.2
 Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
 Frame = +1

Query: 193 NGMDIPLFSIFRRLVFSNRRLR*TSINTRKHASNRLISH-IFSNTLWFI 336
           NG+++P F  F   +    R      N  K  +NR+IS+ ++  T +F+
Sbjct: 12  NGVEVPPFRNFHEFLLETDRYERPPFNDFKKWNNRIISNLLYFQTNYFV 60


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,581,280
Number of Sequences: 27780
Number of extensions: 289317
Number of successful extensions: 646
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 621
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 646
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1518563232
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)