Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11m02
         (613 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific doub...    23   5.9  
AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.           23   7.8  
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign...    23   7.8  
AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transpor...    23   7.8  

>AY903307-1|AAX48939.1|  283|Anopheles gambiae male-specific
           doublesex protein protein.
          Length = 283

 Score = 23.4 bits (48), Expect = 5.9
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +3

Query: 492 RR*SRKALSRTKRRLRKRNEQIEH 563
           +R S ++LS  KRR RK+N+   H
Sbjct: 240 KRSSFRSLSMHKRRTRKQNKNPTH 263


>AY578805-1|AAT07310.1|  753|Anopheles gambiae medea protein.
          Length = 753

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 11/47 (23%), Positives = 19/47 (40%)
 Frame = +2

Query: 269 KYEFDLEFDIPITYPKTAPEIALPGLDGKTAKMYRGGKICLTDHFKP 409
           ++ FDL+ D     P     +  PG+D     +  G    + D + P
Sbjct: 115 QFAFDLKCDSVCVNPYHYERVVSPGIDLSGLTLQSGPSRLIKDEYTP 161


>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
           FGF-signaling promoter protein.
          Length = 1197

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = +2

Query: 47  DEGTKRTLSSIPLLQTKAGPRDKELWVNRLKEEYQALIK 163
           D GT R  +   L  T        LWVN LK  +  + K
Sbjct: 200 DSGTLRAAAMDVLFVTARHSEHGMLWVNHLKVCFDKITK 238


>AF533893-1|AAM97678.1|  570|Anopheles gambiae ascorbate transporter
           protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 7/25 (28%), Positives = 15/25 (60%)
 Frame = +1

Query: 364 DVPRWQDMPH*SFQAVVGEERAEVW 438
           ++P+W+  P  +  A+   +R E+W
Sbjct: 118 NLPQWKCPPDDAINAMTDTDRTELW 142


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,312
Number of Sequences: 2352
Number of extensions: 16479
Number of successful extensions: 45
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)