Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11m02
         (613 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    26   0.33 
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    26   0.33 
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    26   0.33 
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    23   3.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   3.1  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   3.1  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.2  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   9.5  

>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 353 YRQDRAGLFLVRSLDMLSVCQTQGQ-THTSGGYEQTSICRTIWSRFCQTRDGTSHYQQTC 177
           Y  +  G+  V+ ++  +V +T  + TH   G   + I RT+ S + Q +D    ++  C
Sbjct: 284 YVPEFKGVLDVKDVEEGNVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFEHPC 343


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 353 YRQDRAGLFLVRSLDMLSVCQTQGQ-THTSGGYEQTSICRTIWSRFCQTRDGTSHYQQTC 177
           Y  +  G+  V+ ++  +V +T  + TH   G   + I RT+ S + Q +D    ++  C
Sbjct: 199 YVPEFKGVLDVKDVEEGNVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFEHPC 258


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = -3

Query: 353 YRQDRAGLFLVRSLDMLSVCQTQGQ-THTSGGYEQTSICRTIWSRFCQTRDGTSHYQQTC 177
           Y  +  G+  V+ ++  +V +T  + TH   G   + I RT+ S + Q +D    ++  C
Sbjct: 518 YVPEFKGVLDVKDVEEGNVEETNSEETHQKDGSSDSVIKRTVVSSYLQLQDLLGDFEHPC 577


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 5/8 (62%), Positives = 7/8 (87%)
 Frame = -3

Query: 125 PIAPCPWV 102
           P+ PCPW+
Sbjct: 231 PVKPCPWI 238


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -2

Query: 537  SVFSLYVTTPFSIISGISTASQGPSPRAMAWAIPNLGTFLAHNGLK*SVR-HILP 376
            + + LY+T+   I S  S+       +  A  IP   TFL+ N     +R H+ P
Sbjct: 1469 NTYQLYLTSHNKIGSSPSSPVLSVRTQGQAPGIPPAATFLSPNSTTLVLRLHVWP 1523


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 16/55 (29%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
 Frame = -2

Query: 537  SVFSLYVTTPFSIISGISTASQGPSPRAMAWAIPNLGTFLAHNGLK*SVR-HILP 376
            + + LY+T+   I S  S+       +  A  IP   TFL+ N     +R H+ P
Sbjct: 1465 NTYQLYLTSHNKIGSSPSSPVLSVRTQGQAPGIPPAATFLSPNSTTLVLRLHVWP 1519


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = -3

Query: 476 ARDPAQEPWHGQSQTSARSSPT 411
           +RDP + P+   + TSA  S T
Sbjct: 418 SRDPERTPYQWDNSTSAGFSQT 439


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = +3

Query: 504 RKALSRTKRRLRKRNEQI 557
           ++ LSR +R LR+R EQ+
Sbjct: 111 KEQLSREQRFLRRRLEQL 128


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,063
Number of Sequences: 438
Number of extensions: 4702
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 18093444
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)