Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11l18
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450 ...    24   1.2  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   2.1  
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   4.7  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   4.7  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   4.7  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   4.7  
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    21   8.3  

>AY920544-1|AAX62142.1|  463|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 463

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/38 (26%), Positives = 17/38 (44%)
 Frame = +2

Query: 500 YYEFWKDVALCTIIKLCRKFGVTSLDTFCQSLELPTLN 613
           YY F     L   ++L ++ GV   D+F   + +   N
Sbjct: 30  YYHFMTPTLLLRDVELIKQIGVKEFDSFHDHVSVSNTN 67


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 11/35 (31%), Positives = 21/35 (60%)
 Frame = -1

Query: 366 FKVVAERVTPVLRLNSCEKLGLVARVETLKESSTN 262
           F+ + +  TP++R  +  KLG +A+V  L+   T+
Sbjct: 172 FRALCQDDTPMVRRAAATKLGELAQVVELEYLKTD 206


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 475 PSCTKNLTSFSNN 437
           PS T N T+F+NN
Sbjct: 132 PSATNNNTNFNNN 144


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 5/13 (38%), Positives = 10/13 (76%)
 Frame = +3

Query: 252 ICHHWLNFLSMFQ 290
           + H WLN+++ F+
Sbjct: 402 VSHKWLNYINQFE 414


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 475 PSCTKNLTSFSNN 437
           PS T N T+F+NN
Sbjct: 80  PSATNNNTNFNNN 92


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 475 PSCTKNLTSFSNN 437
           PS T N T+F+NN
Sbjct: 263 PSATNNNTNFNNN 275


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = -1

Query: 423 LLGEVKLQYKIKGKTV 376
           LLGE+K     KGKT+
Sbjct: 161 LLGELKSALNAKGKTL 176


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,509
Number of Sequences: 336
Number of extensions: 2932
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)