Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11l18
         (618 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    25   1.5  
AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450 CY...    24   3.4  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    23   6.0  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   6.0  

>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 25.4 bits (53), Expect = 1.5
 Identities = 11/39 (28%), Positives = 25/39 (64%)
 Frame = -1

Query: 219 YDIDLIENPKFEIKPIRNVPHAIRNEVKQELDRMVKLDV 103
           YD DL+ N    ++P+ NV  A+  ++K +L +++ +++
Sbjct: 28  YD-DLLSNYNKLVRPVVNVTDALTVKIKLKLSQLIDVNL 65


>AY062207-1|AAL58568.1|  504|Anopheles gambiae cytochrome P450
           CYP6S2 protein.
          Length = 504

 Score = 24.2 bits (50), Expect = 3.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 178 FNFKFRVFYEVNIILKFFVPTYPFKYVI 261
           F+F+ R  + +N  + F  PT+PF  +I
Sbjct: 18  FHFRQRYLFWLNRDVPFLEPTFPFGNMI 45


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = -1

Query: 234 YKKFEYDIDLIENPKFEIK 178
           Y+K EY++  I N  F IK
Sbjct: 364 YQKHEYEVHRISNENFGIK 382


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.4 bits (48), Expect = 6.0
 Identities = 15/47 (31%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
 Frame = +2

Query: 269 ELSF-NVSTRATNPNFSQLFSLKTGVTLSATTLNSILTVFPFILYCN 406
           EL F N+ T   +  F       T  TL  T    +LT+F  + YC+
Sbjct: 190 ELYFLNIRTSMAHYTFYVAIMWPTIYTLGFTGGTKLLTIFSNVKYCS 236


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,892
Number of Sequences: 2352
Number of extensions: 11153
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 60553008
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)