Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11l18
(618 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC010903-1|AAH10903.1| 235|Homo sapiens centrosomal protein 27k... 32 1.9
AK022939-1|BAB14319.1| 141|Homo sapiens protein ( Homo sapiens ... 32 1.9
AK001322-1|BAA91623.1| 235|Homo sapiens protein ( Homo sapiens ... 32 1.9
X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein. 31 3.3
U55208-1|AAC50927.1| 2175|Homo sapiens myosin VIIa protein. 31 3.3
U39226-1|AAB03679.1| 2215|Homo sapiens myosin VIIA protein. 31 3.3
D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 prot... 31 3.3
BC067476-1|AAH67476.1| 540|Homo sapiens G protein-coupled recep... 30 5.7
BC067475-1|AAH67475.1| 540|Homo sapiens G protein-coupled recep... 30 5.7
AF101472-1|AAD22770.1| 540|Homo sapiens G protein-coupled recep... 30 5.7
AF072693-1|AAD19849.1| 540|Homo sapiens G protein-coupled recep... 30 5.7
AC008068-1|AAY15018.1| 540|Homo sapiens unknown protein. 30 5.7
L29555-1|AAA36612.1| 340|Homo sapiens sialyltransferase protein. 30 7.5
L13972-1|AAC37574.1| 340|Homo sapiens beta-galactoside alpha-2,... 30 7.5
BC018357-1|AAH18357.1| 340|Homo sapiens ST3 beta-galactoside al... 30 7.5
AF059321-1|AAC17874.1| 340|Homo sapiens alpha-2,3-sialyltransfe... 30 7.5
>BC010903-1|AAH10903.1| 235|Homo sapiens centrosomal protein 27kDa
protein.
Length = 235
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -1
Query: 222 EYDIDLIENPKFEIKPIRNVPHAIRNEVKQELDRMVKLDVIKPETE 85
E + IE + ++ IRN+PH N +K+ + K+D++ ETE
Sbjct: 137 ELAVTFIERLETHLETIRNIPHLAAN-LKKMNQALAKMDILVTETE 181
>AK022939-1|BAB14319.1| 141|Homo sapiens protein ( Homo sapiens
cDNA FLJ12877 fis, clone NT2RP2003825. ).
Length = 141
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -1
Query: 222 EYDIDLIENPKFEIKPIRNVPHAIRNEVKQELDRMVKLDVIKPETE 85
E + IE + ++ IRN+PH N +K+ + K+D++ ETE
Sbjct: 43 ELAVTFIERLETHLETIRNIPHLAAN-LKKMNQALAKMDILVTETE 87
>AK001322-1|BAA91623.1| 235|Homo sapiens protein ( Homo sapiens
cDNA FLJ10460 fis, clone NT2RP1001475. ).
Length = 235
Score = 31.9 bits (69), Expect = 1.9
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -1
Query: 222 EYDIDLIENPKFEIKPIRNVPHAIRNEVKQELDRMVKLDVIKPETE 85
E + IE + ++ IRN+PH N +K+ + K+D++ ETE
Sbjct: 137 ELAVTFIERLETHLETIRNIPHLAAN-LKKMNQALAKMDILVTETE 181
>X75304-1|CAA53052.1| 3259|Homo sapiens giantin protein.
Length = 3259
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = -1
Query: 315 EKLGLVARVETLKESSTNDDIF---KRVRWYKKFEYDIDLIENPKFEIKPIRNVPHAIRN 145
+K LV +E+LK S + K K++E + EN E + I++V A+R
Sbjct: 1582 DKEKLVKEIESLKSSKIAESTEWQEKHKELQKEYEILLQSYENVSNEAERIQHVVEAVRQ 1641
Query: 144 EVKQELDRMVKLDVIKPETE 85
E ++ ++ + K ETE
Sbjct: 1642 EKQELYGKLRSTEANKKETE 1661
>U55208-1|AAC50927.1| 2175|Homo sapiens myosin VIIa protein.
Length = 2175
Score = 31.1 bits (67), Expect = 3.3
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 293 RATNPNFSQLFSL---KTGVTLSATTLNSILTVFPFILYCNFTSPSRY*HSVI 442
+ T PNF ++ + K GV+L ILT PF N++S + Y H I
Sbjct: 2079 QTTEPNFPEILLIAINKYGVSLIDPKTKDILTTHPFTKISNWSSGNTYFHITI 2131
>U39226-1|AAB03679.1| 2215|Homo sapiens myosin VIIA protein.
Length = 2215
Score = 31.1 bits (67), Expect = 3.3
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 3/53 (5%)
Frame = +2
Query: 293 RATNPNFSQLFSL---KTGVTLSATTLNSILTVFPFILYCNFTSPSRY*HSVI 442
+ T PNF ++ + K GV+L ILT PF N++S + Y H I
Sbjct: 2119 QTTEPNFPEILLIAINKYGVSLIDPKTKDILTTHPFTKISNWSSGNTYFHITI 2171
>D25542-1|BAA05025.1| 3225|Homo sapiens golgi antigen gcp372 protein.
Length = 3225
Score = 31.1 bits (67), Expect = 3.3
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = -1
Query: 315 EKLGLVARVETLKESSTNDDIF---KRVRWYKKFEYDIDLIENPKFEIKPIRNVPHAIRN 145
+K LV +E+LK S + K K++E + EN E + I++V A+R
Sbjct: 1548 DKEKLVKEIESLKSSKIAESTEWQEKHKELQKEYEILLQSYENVSNEAERIQHVVEAVRQ 1607
Query: 144 EVKQELDRMVKLDVIKPETE 85
E ++ ++ + K ETE
Sbjct: 1608 EKQELYGKLRSTEANKKETE 1627
>BC067476-1|AAH67476.1| 540|Homo sapiens G protein-coupled receptor
75 protein.
Length = 540
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 5 FTSDGSMHILNIHFCLITTIGLTAVVGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGL 181
F ++ ILN+ FC + G+TA + + +S+ +I CFT L + G ++ L
Sbjct: 75 FRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFTFHLTSSGFIIMSL 133
>BC067475-1|AAH67475.1| 540|Homo sapiens G protein-coupled receptor
75 protein.
Length = 540
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 5 FTSDGSMHILNIHFCLITTIGLTAVVGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGL 181
F ++ ILN+ FC + G+TA + + +S+ +I CFT L + G ++ L
Sbjct: 75 FRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFTFHLTSSGFIIMSL 133
>AF101472-1|AAD22770.1| 540|Homo sapiens G protein-coupled receptor
75 protein.
Length = 540
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 5 FTSDGSMHILNIHFCLITTIGLTAVVGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGL 181
F ++ ILN+ FC + G+TA + + +S+ +I CFT L + G ++ L
Sbjct: 75 FRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFTFHLTSSGFIIMSL 133
>AF072693-1|AAD19849.1| 540|Homo sapiens G protein-coupled receptor
75 protein.
Length = 540
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 5 FTSDGSMHILNIHFCLITTIGLTAVVGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGL 181
F ++ ILN+ FC + G+TA + + +S+ +I CFT L + G ++ L
Sbjct: 75 FRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFTFHLTSSGFIIMSL 133
>AC008068-1|AAY15018.1| 540|Homo sapiens unknown protein.
Length = 540
Score = 30.3 bits (65), Expect = 5.7
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +2
Query: 5 FTSDGSMHILNIHFCLITTIGLTAVVGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGL 181
F ++ ILN+ FC + G+TA + + +S+ +I CFT L + G ++ L
Sbjct: 75 FRTNFDFMILNLSFCDLFICGVTAPMFTFVLFFSSASSIPDAFCFTFHLTSSGFIIMSL 133
>L29555-1|AAA36612.1| 340|Homo sapiens sialyltransferase protein.
Length = 340
Score = 29.9 bits (64), Expect = 7.5
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 381 TVKILFKVVAERVTPVLRLNS--CEKLGLVARVETLKESSTNDDI 253
T+K LF+VV V P+L S C + +V L+ESS +I
Sbjct: 116 TIKELFRVVPGNVDPMLEKRSVGCRRCAVVGNSGNLRESSYGPEI 160
>L13972-1|AAC37574.1| 340|Homo sapiens beta-galactoside
alpha-2,3-sialyltransferase protein.
Length = 340
Score = 29.9 bits (64), Expect = 7.5
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 381 TVKILFKVVAERVTPVLRLNS--CEKLGLVARVETLKESSTNDDI 253
T+K LF+VV V P+L S C + +V L+ESS +I
Sbjct: 116 TIKELFRVVPGNVDPMLEKRSVGCRRCAVVGNSGNLRESSYGPEI 160
>BC018357-1|AAH18357.1| 340|Homo sapiens ST3 beta-galactoside
alpha-2,3-sialyltransferase 1 protein.
Length = 340
Score = 29.9 bits (64), Expect = 7.5
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 381 TVKILFKVVAERVTPVLRLNS--CEKLGLVARVETLKESSTNDDI 253
T+K LF+VV V P+L S C + +V L+ESS +I
Sbjct: 116 TIKELFRVVPGNVDPMLEKRSVGCRRCAVVGNSGNLRESSYGPEI 160
>AF059321-1|AAC17874.1| 340|Homo sapiens
alpha-2,3-sialyltransferase protein.
Length = 340
Score = 29.9 bits (64), Expect = 7.5
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = -1
Query: 381 TVKILFKVVAERVTPVLRLNS--CEKLGLVARVETLKESSTNDDI 253
T+K LF+VV V P+L S C + +V L+ESS +I
Sbjct: 116 TIKELFRVVPGNVDPMLEKRSVGCRRCAVVGNSGNLRESSYGPEI 160
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,091,075
Number of Sequences: 237096
Number of extensions: 1498204
Number of successful extensions: 3162
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 3108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3161
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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