Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11l18
(618 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical pr... 31 0.87
U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork head/HNF-3... 31 0.87
U80029-17|AAB37596.2| 330|Caenorhabditis elegans Serpentine rec... 30 1.2
AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical ... 29 2.7
AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical ... 28 4.6
AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical ... 28 4.6
U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un... 28 6.1
U80029-18|AAB37597.2| 330|Caenorhabditis elegans Serpentine rec... 28 6.1
AC024757-8|AAF59454.2| 215|Caenorhabditis elegans Hypothetical ... 28 6.1
Z83123-5|CAB05611.1| 332|Caenorhabditis elegans Hypothetical pr... 27 8.1
AL117204-39|CAB55145.4| 422|Caenorhabditis elegans Hypothetical... 27 8.1
>Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical
protein F38A6.1c protein.
Length = 411
Score = 30.7 bits (66), Expect = 0.87
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +2
Query: 53 ITTIGLTAVVGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGLISNLGFSMRSISYSNFL 232
+ T+G T +++G S + L +S F + L FL + N S I Y+N +
Sbjct: 337 VGTLGTTQAQMTLNGQYASPY--LYSSDFATILPQSQNFLNNTLYNTTSSYPGIDYTNGV 394
Query: 233 YQRTLLNMSS 262
YQ TL + ++
Sbjct: 395 YQNTLYSSTN 404
>Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical
protein F38A6.1b protein.
Length = 442
Score = 30.7 bits (66), Expect = 0.87
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +2
Query: 53 ITTIGLTAVVGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGLISNLGFSMRSISYSNFL 232
+ T+G T +++G S + L +S F + L FL + N S I Y+N +
Sbjct: 368 VGTLGTTQAQMTLNGQYASPY--LYSSDFATILPQSQNFLNNTLYNTTSSYPGIDYTNGV 425
Query: 233 YQRTLLNMSS 262
YQ TL + ++
Sbjct: 426 YQNTLYSSTN 435
>Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical
protein F38A6.1a protein.
Length = 506
Score = 30.7 bits (66), Expect = 0.87
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +2
Query: 53 ITTIGLTAVVGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGLISNLGFSMRSISYSNFL 232
+ T+G T +++G S + L +S F + L FL + N S I Y+N +
Sbjct: 432 VGTLGTTQAQMTLNGQYASPY--LYSSDFATILPQSQNFLNNTLYNTTSSYPGIDYTNGV 489
Query: 233 YQRTLLNMSS 262
YQ TL + ++
Sbjct: 490 YQNTLYSSTN 499
>U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork
head/HNF-3-like protein protein.
Length = 506
Score = 30.7 bits (66), Expect = 0.87
Identities = 20/70 (28%), Positives = 34/70 (48%)
Frame = +2
Query: 53 ITTIGLTAVVGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGLISNLGFSMRSISYSNFL 232
+ T+G T +++G S + L +S F + L FL + N S I Y+N +
Sbjct: 432 VGTLGTTQAQMTLNGQYASPY--LYSSDFATILPQSQNFLNNTLYNTTSSYPGIDYTNGV 489
Query: 233 YQRTLLNMSS 262
YQ TL + ++
Sbjct: 490 YQNTLYSSTN 499
>U80029-17|AAB37596.2| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 22 protein.
Length = 330
Score = 30.3 bits (65), Expect = 1.2
Identities = 29/122 (23%), Positives = 55/122 (45%), Gaps = 8/122 (6%)
Frame = +2
Query: 59 TIGLT-AVVGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGLISNLG-FSMRSIS---YS 223
T+GL A++ G +++FT S S + C F IG+ + ++ ++ +
Sbjct: 143 TLGLLMAILQLTIGFFSTAFTFSSFSFADPLMDYCIAFKIGIFGSTDVINLTGVAIQIFG 202
Query: 224 NFLYQRTLLNMSSLVE--LSFNVSTR-ATNPNFSQLFSLKTGVTLSATTLNSILTVFPFI 394
L++ L L+ ++S R + N + +LK L + L + +T+F FI
Sbjct: 203 RILFELMFRKNEELRSKLLTSSLSNRYSLEQNVKSMETLKVFANLQSIFLTAQMTIFLFI 262
Query: 395 LY 400
LY
Sbjct: 263 LY 264
>AC006669-1|AAF39909.1| 1203|Caenorhabditis elegans Hypothetical
protein H43E16.1 protein.
Length = 1203
Score = 29.1 bits (62), Expect = 2.7
Identities = 35/128 (27%), Positives = 49/128 (38%), Gaps = 4/128 (3%)
Frame = +2
Query: 53 ITTIGLTAVVGSVSGLMTSSFTILSNSCFTSFLMAC--GTFLIGLISNLGFSMRSISYSN 226
+ T+ TA V S T TI S F S + GT I + S S
Sbjct: 517 VITVSTTATVSSGQSTSTFGTTIGQGSSFGSSTIQTTQGTSSFAPIPSTAGSSSQTPGSM 576
Query: 227 FLYQRTLLNMSSLVELSFNVS--TRATNPNFSQLFSLKTGVTLSATTLNSILTVFPFILY 400
T+ MSS + + S T T P S + S+ T V ++T+ S +T P
Sbjct: 577 SSTGTTVGQMSSSFQPTAPTSLGTIMTTPGTSSIPSISTSVNSGSSTIGSTVTQAPSSST 636
Query: 401 CNFTSPSR 424
SPS+
Sbjct: 637 SMGPSPSQ 644
>AF025472-7|AAB71069.1| 1466|Caenorhabditis elegans Hypothetical
protein ZK250.9 protein.
Length = 1466
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Frame = -1
Query: 357 VAERVTPVLRLNSCEKLGLVARVETLKESSTNDDIFKRVRWYKKFEYDIDLIENPKFEIK 178
++E + P R ++ ++ L+ARV LK + DD+ R Y I + E K +
Sbjct: 528 ISENLGP--RQSASDRPDLIARVFKLKVDALFDDLLNRDILGHVAAY-ISVFERQKRGLP 584
Query: 177 PIRNVPHAIRN---EVKQELDRMVKLDVIKPETEP 82
+ + N +++D++V+ ++ P+ EP
Sbjct: 585 HVHMLLTMAENSKPRTSEDIDKIVQAEIPNPDNEP 619
>AC024749-1|AAF60434.1| 1466|Caenorhabditis elegans Hypothetical
protein Y16E11A.2 protein.
Length = 1466
Score = 28.3 bits (60), Expect = 4.6
Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 3/95 (3%)
Frame = -1
Query: 357 VAERVTPVLRLNSCEKLGLVARVETLKESSTNDDIFKRVRWYKKFEYDIDLIENPKFEIK 178
++E + P R ++ ++ L+ARV LK + DD+ R Y I + E K +
Sbjct: 528 ISENLGP--RQSASDRPDLIARVFKLKVDALFDDLLNRDILGHVAAY-ISVFERQKRGLP 584
Query: 177 PIRNVPHAIRN---EVKQELDRMVKLDVIKPETEP 82
+ + N +++D++V+ ++ P+ EP
Sbjct: 585 HVHMLLTMAENSKPRTSEDIDKIVQAEIPNPDNEP 619
>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
unconventional myosinprotein 6 protein.
Length = 2098
Score = 27.9 bits (59), Expect = 6.1
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 332 KTGVTLSATTLNSILTVFPFILYCNFTSPSRY 427
+TGV + ++L +PF + CN+TS + Y
Sbjct: 2013 QTGVNIYHLDTKNLLVQYPFNVICNWTSGNTY 2044
>U80029-18|AAB37597.2| 330|Caenorhabditis elegans Serpentine
receptor, class ab (class a-like) protein 20 protein.
Length = 330
Score = 27.9 bits (59), Expect = 6.1
Identities = 31/122 (25%), Positives = 53/122 (43%), Gaps = 8/122 (6%)
Frame = +2
Query: 59 TIGLTAVVGSVSGLMTSS-FTILSNSCFTSFLMACGTFLIG------LISNLGFSMRSIS 217
T G+ + +S ++ S+ F+ S S F+ C +F IG +I +LG + +
Sbjct: 143 TFGILMAILQLSIVLFSTVFSFSSFSFADPFMDYCISFKIGKFGSTEVIHSLGVATQIFG 202
Query: 218 YSNFLYQRTLLNMSSLVELSFNVSTR-ATNPNFSQLFSLKTGVTLSATTLNSILTVFPFI 394
F Y L+ +S R + N + +LK L + L + +T+F FI
Sbjct: 203 RILFEYIFQKNEKLRSKRLTSTLSNRYSLQQNMKSMETLKVFANLQSIFLTAQMTIFLFI 262
Query: 395 LY 400
LY
Sbjct: 263 LY 264
>AC024757-8|AAF59454.2| 215|Caenorhabditis elegans Hypothetical
protein Y37E11AL.2 protein.
Length = 215
Score = 27.9 bits (59), Expect = 6.1
Identities = 19/72 (26%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +2
Query: 53 ITTIGLTAVVGSVSGLMTSSFTILS-NSCFTSFLMACGTFLIGLISNLGFSMRSISYSNF 229
+ T +A+ + S S + ++ N+ F + L CGT I + S+ S+ S F
Sbjct: 14 VATAPSSAMSAAKSSKAPSVYNVVPFNASFLTILTICGTLQISALVPAVGSVLSVLLSLF 73
Query: 230 LYQRTLLNMSSL 265
Y+ L+ SS+
Sbjct: 74 TYEWLNLHFSSM 85
>Z83123-5|CAB05611.1| 332|Caenorhabditis elegans Hypothetical
protein T04A11.8 protein.
Length = 332
Score = 27.5 bits (58), Expect = 8.1
Identities = 20/73 (27%), Positives = 40/73 (54%)
Frame = +2
Query: 80 VGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGLISNLGFSMRSISYSNFLYQRTLLNMS 259
+GS +G+M++ TIL+++ +L C ++ I L +R I S + Q + + S
Sbjct: 196 IGSFNGIMSAPITILNSAI---WLTVC--LILNWI--LYRKLRKIKLSQSISQLSQVGKS 248
Query: 260 SLVELSFNVSTRA 298
+E+S +++T A
Sbjct: 249 RKIEISLSLTTTA 261
>AL117204-39|CAB55145.4| 422|Caenorhabditis elegans Hypothetical
protein Y116A8C.9 protein.
Length = 422
Score = 27.5 bits (58), Expect = 8.1
Identities = 9/30 (30%), Positives = 17/30 (56%)
Frame = +1
Query: 145 ISYGVWNISYRFNFKFRVFYEVNIILKFFV 234
I +W++ + F+F FY +NI+ F+
Sbjct: 137 IGIAIWSLRHDKPFEFEFFYAINIVQLVFI 166
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,216,177
Number of Sequences: 27780
Number of extensions: 260870
Number of successful extensions: 896
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 894
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1342816466
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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