Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11l18
(618 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g55350.4 68414.m06326 calpain-type cysteine protease family i... 33 0.20
At1g55350.3 68414.m06325 calpain-type cysteine protease family i... 33 0.20
At1g55350.2 68414.m06324 calpain-type cysteine protease family i... 33 0.20
At1g55350.1 68414.m06323 calpain-type cysteine protease family i... 33 0.20
At3g20590.1 68416.m02606 non-race specific disease resistance pr... 31 0.81
At4g39100.1 68417.m05536 PHD finger family protein / bromo-adjac... 30 1.1
At4g29880.1 68417.m04252 leucine-rich repeat family protein cont... 30 1.1
At4g11630.1 68417.m01860 ribosomal protein L19 family protein si... 30 1.1
At1g78280.1 68414.m09122 transcription factor jumonji (jmjC) dom... 29 2.5
At5g52850.1 68418.m06560 pentatricopeptide (PPR) repeat-containi... 29 3.3
At5g11160.1 68418.m01304 adenine phosphoribosyltransferase, puta... 27 10.0
>At1g55350.4 68414.m06326 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 32.7 bits (71), Expect = 0.20
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 32 LNIHFCLITTIGLTAVVGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGLISNLGFSMRS 211
L + F ++ TIG+ + S + +T T S CF + L+ FL+G + F+ S
Sbjct: 944 LLVLFLMVVTIGVIHLWASNNFYLTRKQT--SFVCFLALLLGLAAFLLGWHQDKAFAGAS 1001
Query: 212 ISYSNFL 232
+ Y FL
Sbjct: 1002 VGYFTFL 1008
>At1g55350.3 68414.m06325 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 32.7 bits (71), Expect = 0.20
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 32 LNIHFCLITTIGLTAVVGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGLISNLGFSMRS 211
L + F ++ TIG+ + S + +T T S CF + L+ FL+G + F+ S
Sbjct: 944 LLVLFLMVVTIGVIHLWASNNFYLTRKQT--SFVCFLALLLGLAAFLLGWHQDKAFAGAS 1001
Query: 212 ISYSNFL 232
+ Y FL
Sbjct: 1002 VGYFTFL 1008
>At1g55350.2 68414.m06324 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 32.7 bits (71), Expect = 0.20
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 32 LNIHFCLITTIGLTAVVGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGLISNLGFSMRS 211
L + F ++ TIG+ + S + +T T S CF + L+ FL+G + F+ S
Sbjct: 944 LLVLFLMVVTIGVIHLWASNNFYLTRKQT--SFVCFLALLLGLAAFLLGWHQDKAFAGAS 1001
Query: 212 ISYSNFL 232
+ Y FL
Sbjct: 1002 VGYFTFL 1008
>At1g55350.1 68414.m06323 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 32.7 bits (71), Expect = 0.20
Identities = 20/67 (29%), Positives = 33/67 (49%)
Frame = +2
Query: 32 LNIHFCLITTIGLTAVVGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGLISNLGFSMRS 211
L + F ++ TIG+ + S + +T T S CF + L+ FL+G + F+ S
Sbjct: 944 LLVLFLMVVTIGVIHLWASNNFYLTRKQT--SFVCFLALLLGLAAFLLGWHQDKAFAGAS 1001
Query: 212 ISYSNFL 232
+ Y FL
Sbjct: 1002 VGYFTFL 1008
>At3g20590.1 68416.m02606 non-race specific disease resistance
protein, putative similar to non-race specific disease
resistance protein [Arabidopsis thaliana] NDR1
gi|2754816|gb|AAB95208
Length = 255
Score = 30.7 bits (66), Expect = 0.81
Identities = 26/100 (26%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Frame = +2
Query: 131 SCFTSFLMACGTFLIGLISNLGFSMRSISYSNFLYQRTLLNMSSLVELSFNVSTRATNPN 310
+CF F+ + L +L S NF N+SS + N R NPN
Sbjct: 16 TCFFKFIFTTRLGALILWLSLRAKKPKCSIQNFYIPALSKNLSSRDNTTLNFMVRCDNPN 75
Query: 311 FSQLFSLKTGVTLSATTLNSILT-VFPFILYCNFTSPSRY 427
+ V L+ +T+N+ T +L N+T P Y
Sbjct: 76 KDKGI-YYDDVHLTFSTINTTTTNSSDLVLVANYTVPKFY 114
>At4g39100.1 68417.m05536 PHD finger family protein / bromo-adjacent
homology (BAH) domain-containing protein contains Pfam
domain, PF00628: PHD-finger and PF01426: BAH domain
Length = 228
Score = 30.3 bits (65), Expect = 1.1
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = -1
Query: 396 KIKGKTVKILFKVVAERVTPVLRLNSCEKLGLVARVETLKESSTNDDIFKRVRWYKKFEY 217
++K +K + K + E ++R + K VARVE ++ + RVRWY + E
Sbjct: 10 QLKSYKLKHINKSIQEGDAVLMRSSEPGKPSYVARVEAIETDARGSHAKVRVRWYYRPEE 69
Query: 216 DI 211
I
Sbjct: 70 SI 71
>At4g29880.1 68417.m04252 leucine-rich repeat family protein
contains leucine rich repeats, Pfam:PF00560
Length = 404
Score = 30.3 bits (65), Expect = 1.1
Identities = 24/79 (30%), Positives = 32/79 (40%), Gaps = 4/79 (5%)
Frame = +2
Query: 149 LMACGTFLIGL---ISNLGFSMRSISYSNFLYQRTLL-NMSSLVELSFNVSTRATNPNFS 316
L G FL+ L I N F + S N Y +L N S F+ S N NF+
Sbjct: 128 LNVSGNFLVSLPQTIQNCRFHTSTKSGPNQSYMMIMLINSSVFFCFGFSRSLEELNANFN 187
Query: 317 QLFSLKTGVTLSATTLNSI 373
+L L + L T L +
Sbjct: 188 ELIRLPDNIGLELTNLKKL 206
>At4g11630.1 68417.m01860 ribosomal protein L19 family protein
similar to plastid ribosomal protein L19 precursor
[Spinacia oleracea] gi|7582403|gb|AAF64312
Length = 225
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +2
Query: 17 GSMHILNIH-FCLITTIGLTAVVGSVSGLMTSSFTILSNSCFTSFLMACGTFLIGLISNL 193
GS +L H F + T+ T+ S S + +SC +S T+LI + N
Sbjct: 6 GSTRLLQRHRFSISNTLRFTSSSSCGSWSENESRKLGFDSCPSS---RAATYLISSLKNA 62
Query: 194 GFSMRSISYSNFLY 235
GFS +I NF Y
Sbjct: 63 GFSSSAIPKQNFTY 76
>At1g78280.1 68414.m09122 transcription factor jumonji (jmjC)
domain-containing protein contains Pfam PF00646: F-box
domain; contains Pfam PF02373: jmjC domain; similar to
apoptotic cell clearance receptor PtdSerR (GI:11037740)
[Mus musculus]
Length = 916
Score = 29.1 bits (62), Expect = 2.5
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 3/69 (4%)
Frame = -1
Query: 288 ETLKESSTNDDIFKRVR-WYKKFEYDIDLIENPKFEIKPIRNVPHAIRNEVKQELDR--M 118
ET + + KR W F YDID + + + + N P ++ N V Q R +
Sbjct: 431 ETENREEDVNGVSKRYNMWKNGFSYDIDFLASFLDKERDHYNFPWSMGNSVGQREMRAWL 490
Query: 117 VKLDVIKPE 91
KL V+KPE
Sbjct: 491 SKLWVLKPE 499
>At5g52850.1 68418.m06560 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 893
Score = 28.7 bits (61), Expect = 3.3
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 4/78 (5%)
Frame = +2
Query: 164 TFLIGLISNLGFSMRSISYSNFLY----QRTLLNMSSLVELSFNVSTRATNPNFSQLFSL 331
T L+ + LG ++S N++Y + L++ + S N+ T + +S+
Sbjct: 497 TSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHL-HCYSV 555
Query: 332 KTGVTLSATTLNSILTVF 385
K+G + +A+ LNS++ ++
Sbjct: 556 KSGFSGAASVLNSLVDMY 573
>At5g11160.1 68418.m01304 adenine phosphoribosyltransferase,
putative strong similarity to SP|Q42563 Adenine
phosphoribosyltransferase 2 (EC 2.4.2.7) (APRT)
{Arabidopsis thaliana}; contains Pfam profile PF00156:
Phosphoribosyl transferase domain
Length = 191
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/31 (41%), Positives = 22/31 (70%), Gaps = 2/31 (6%)
Frame = -1
Query: 453 QVSQITEC*YLLG--EVKLQYKIKGKTVKIL 367
Q +++ EC ++G EVK Q+K+KGK + +L
Sbjct: 151 QGAEVVECACVIGLPEVKGQHKLKGKPLYVL 181
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,155,878
Number of Sequences: 28952
Number of extensions: 226938
Number of successful extensions: 712
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 701
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 712
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1246162608
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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