Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11l15
(640 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC001243-1|AAH01243.1| 643|Homo sapiens asparagine synthetase d... 86 1e-16
AY116969-1|AAM77212.1| 643|Homo sapiens HCV NS3-transactivated ... 86 1e-16
AK000759-1|BAA91364.1| 643|Homo sapiens protein ( Homo sapiens ... 86 1e-16
AC012488-1|AAX88843.1| 643|Homo sapiens unknown protein. 86 1e-16
AB075481-1|BAE45745.1| 604|Homo sapiens putative protein produc... 74 4e-13
AY393681-1|AAR02554.1| 158|Homo sapiens immunoglobulin heavy ch... 32 1.5
AJ002659-1|CAA05664.1| 93|Homo sapiens immunoglobulin M heavy ... 30 6.0
>BC001243-1|AAH01243.1| 643|Homo sapiens asparagine synthetase
domain containing 1 protein.
Length = 643
Score = 85.8 bits (203), Expect = 1e-16
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Frame = +3
Query: 57 MCGIFLELSCEKCSIVNDI--DVLRRLKNRGPDHLQRKDFISEIGHHIVFVASVLWMQGP 230
MCGI ++ D+ D+L LK RGP+ ++ S++ + +F A VL ++G
Sbjct: 1 MCGICCSVNFSAEHFSQDLKEDLLYNLKQRGPNS-SKQLLKSDVNYQCLFSAHVLHLRGV 59
Query: 231 QMTLQPLENECG-ILLYNGDIFDE-SWDSRTSDTQIIMEKLSYDCDSQIDKVINVLKSLK 404
+T QP+E+E G + L+NG+IF ++ +DTQI+ LS C ++ +++++ ++
Sbjct: 60 -LTTQPVEDERGNVFLWNGEIFSGIKVEAEENDTQILFNYLS-SCKNE-SEILSLFSEVQ 116
Query: 405 GPFSLIYYCKVTNKLYFTRDRFGRNSLLIH-KXXXXXXXXXXXGTQYEN-----YEVPVS 566
GP+S IYY ++ L+F RD FGR SLL H GTQ EVP S
Sbjct: 117 GPWSFIYYQASSHYLWFGRDFFGRRSLLWHFSNLGKSFCLSSVGTQTSGLANQWQEVPAS 176
Query: 567 HISVLDLNTHKI------LLYTWK 620
+ +DL + I LY WK
Sbjct: 177 GLFRIDLKSTVISRCIILQLYPWK 200
>AY116969-1|AAM77212.1| 643|Homo sapiens HCV NS3-transactivated
protein 1 protein.
Length = 643
Score = 85.8 bits (203), Expect = 1e-16
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Frame = +3
Query: 57 MCGIFLELSCEKCSIVNDI--DVLRRLKNRGPDHLQRKDFISEIGHHIVFVASVLWMQGP 230
MCGI ++ D+ D+L LK RGP+ ++ S++ + +F A VL ++G
Sbjct: 1 MCGICCSVNFSAEHFSQDLKEDLLYNLKQRGPNS-SKQLLKSDVNYQCLFSAHVLHLRGV 59
Query: 231 QMTLQPLENECG-ILLYNGDIFDE-SWDSRTSDTQIIMEKLSYDCDSQIDKVINVLKSLK 404
+T QP+E+E G + L+NG+IF ++ +DTQI+ LS C ++ +++++ ++
Sbjct: 60 -LTTQPVEDERGNVFLWNGEIFSGIKVEAEENDTQILFNYLS-SCKNE-SEILSLFSEVQ 116
Query: 405 GPFSLIYYCKVTNKLYFTRDRFGRNSLLIH-KXXXXXXXXXXXGTQYEN-----YEVPVS 566
GP+S IYY ++ L+F RD FGR SLL H GTQ EVP S
Sbjct: 117 GPWSFIYYQASSHYLWFGRDFFGRRSLLWHFSNLGKSFCLSSVGTQTSGLANQWQEVPAS 176
Query: 567 HISVLDLNTHKI------LLYTWK 620
+ +DL + I LY WK
Sbjct: 177 GLFRIDLKSTVISRCIILQLYPWK 200
>AK000759-1|BAA91364.1| 643|Homo sapiens protein ( Homo sapiens
cDNA FLJ20752 fis, clone HEP02921. ).
Length = 643
Score = 85.8 bits (203), Expect = 1e-16
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Frame = +3
Query: 57 MCGIFLELSCEKCSIVNDI--DVLRRLKNRGPDHLQRKDFISEIGHHIVFVASVLWMQGP 230
MCGI ++ D+ D+L LK RGP+ ++ S++ + +F A VL ++G
Sbjct: 1 MCGICCSVNFSAEHFSQDLKEDLLYNLKQRGPNS-SKQLLKSDVNYQCLFSAHVLHLRGV 59
Query: 231 QMTLQPLENECG-ILLYNGDIFDE-SWDSRTSDTQIIMEKLSYDCDSQIDKVINVLKSLK 404
+T QP+E+E G + L+NG+IF ++ +DTQI+ LS C ++ +++++ ++
Sbjct: 60 -LTTQPVEDERGNVFLWNGEIFSGIKVEAEENDTQILFNYLS-SCKNE-SEILSLFSEVQ 116
Query: 405 GPFSLIYYCKVTNKLYFTRDRFGRNSLLIH-KXXXXXXXXXXXGTQYEN-----YEVPVS 566
GP+S IYY ++ L+F RD FGR SLL H GTQ EVP S
Sbjct: 117 GPWSFIYYQASSHYLWFGRDFFGRRSLLWHFSNLGKSFCLSSVGTQTSGLANQWQEVPAS 176
Query: 567 HISVLDLNTHKI------LLYTWK 620
+ +DL + I LY WK
Sbjct: 177 GLFRIDLKSTVISRCIILQLYPWK 200
>AC012488-1|AAX88843.1| 643|Homo sapiens unknown protein.
Length = 643
Score = 85.8 bits (203), Expect = 1e-16
Identities = 67/204 (32%), Positives = 106/204 (51%), Gaps = 16/204 (7%)
Frame = +3
Query: 57 MCGIFLELSCEKCSIVNDI--DVLRRLKNRGPDHLQRKDFISEIGHHIVFVASVLWMQGP 230
MCGI ++ D+ D+L LK RGP+ ++ S++ + +F A VL ++G
Sbjct: 1 MCGICCSVNFSAEHFSQDLKEDLLYNLKQRGPNS-SKQLLKSDVNYQCLFSAHVLHLRGV 59
Query: 231 QMTLQPLENECG-ILLYNGDIFDE-SWDSRTSDTQIIMEKLSYDCDSQIDKVINVLKSLK 404
+T QP+E+E G + L+NG+IF ++ +DTQI+ LS C ++ +++++ ++
Sbjct: 60 -LTTQPVEDERGNVFLWNGEIFSGIKVEAEENDTQILFNYLS-SCKNE-SEILSLFSEVQ 116
Query: 405 GPFSLIYYCKVTNKLYFTRDRFGRNSLLIH-KXXXXXXXXXXXGTQYEN-----YEVPVS 566
GP+S IYY ++ L+F RD FGR SLL H GTQ EVP S
Sbjct: 117 GPWSFIYYQASSHYLWFGRDFFGRRSLLWHFSNLGKSFCLSSVGTQTSGLANQWQEVPAS 176
Query: 567 HISVLDLNTHKI------LLYTWK 620
+ +DL + I LY WK
Sbjct: 177 GLFRIDLKSTVISGCIILQLYPWK 200
>AB075481-1|BAE45745.1| 604|Homo sapiens putative protein product
of Nbla00058 protein.
Length = 604
Score = 74.1 bits (174), Expect = 4e-13
Identities = 55/163 (33%), Positives = 87/163 (53%), Gaps = 14/163 (8%)
Frame = +3
Query: 174 SEIGHHIVFVASVLWMQGPQMTLQPLENECG-ILLYNGDIFDE-SWDSRTSDTQIIMEKL 347
S++ + +F A VL ++G +T QP+E+E G + L+NG+IF ++ +DTQI+ L
Sbjct: 2 SDVNYQCLFSAHVLHLRGV-LTTQPVEDERGNVFLWNGEIFSGIKVEAEENDTQILFNYL 60
Query: 348 SYDCDSQIDKVINVLKSLKGPFSLIYYCKVTNKLYFTRDRFGRNSLLIH-KXXXXXXXXX 524
S C ++ +++++ ++GP+S IYY ++ L+F RD FGR SLL H
Sbjct: 61 S-SCKNE-SEILSLFSEVQGPWSFIYYQASSHYLWFGRDFFGRRSLLWHFSNLGKSFCLS 118
Query: 525 XXGTQYEN-----YEVPVSHISVLDLNTHKI------LLYTWK 620
GTQ EVP S + +DL + I LY WK
Sbjct: 119 SVGTQTSGLANQWQEVPASGLFRIDLKSTVISRCIILQLYPWK 161
>AY393681-1|AAR02554.1| 158|Homo sapiens immunoglobulin heavy chain
variable region protein.
Length = 158
Score = 32.3 bits (70), Expect = 1.5
Identities = 12/54 (22%), Positives = 30/54 (55%)
Frame = +3
Query: 300 SWDSRTSDTQIIMEKLSYDCDSQIDKVINVLKSLKGPFSLIYYCKVTNKLYFTR 461
+++ T+ TQI+ ++++ D+ + L+SL+ + +YYC + ++ R
Sbjct: 49 TYNGNTNYTQILQDRVTMTTDTSTNTAYMELRSLRSDDTAVYYCARVERRHYDR 102
>AJ002659-1|CAA05664.1| 93|Homo sapiens immunoglobulin M heavy
chain protein.
Length = 93
Score = 30.3 bits (65), Expect = 6.0
Identities = 22/67 (32%), Positives = 31/67 (46%)
Frame = +3
Query: 270 LLYNGDIFDESWDSRTSDTQIIMEKLSYDCDSQIDKVINVLKSLKGPFSLIYYCKVTNKL 449
L Y G IF +S D+R S + ++++ D I+ SLK + IYYC L
Sbjct: 26 LEYMGIIFPDSSDTRYSPS--FQGQVTFSADKSINTAYLQWSSLKASDTAIYYCARHALL 83
Query: 450 YFTRDRF 470
RD F
Sbjct: 84 GSGRDWF 90
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,146,453
Number of Sequences: 237096
Number of extensions: 1770288
Number of successful extensions: 4267
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 4174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4262
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7028963750
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -