Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11l15
         (640 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68507-2|CAA92825.1|  475|Caenorhabditis elegans Hypothetical pr...    46   2e-05
Z82053-5|CAB04833.1|  103|Caenorhabditis elegans Hypothetical pr...    31   0.92 
Z72504-5|CAA96602.2|  812|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z72504-4|CAH60755.1|  653|Caenorhabditis elegans Hypothetical pr...    29   2.1  
Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical pr...    29   2.1  
X91045-1|CAA62505.1|  693|Caenorhabditis elegans let-653 protein.      29   2.1  
AF125952-3|AAD14699.1|  475|Caenorhabditis elegans Hypothetical ...    29   3.7  
AC006722-9|ABP57813.1|  475|Caenorhabditis elegans Hypothetical ...    29   3.7  
U64848-1|AAB04881.2|  481|Caenorhabditis elegans Hypothetical pr...    28   6.5  
AC024746-2|AAO38587.1|  163|Caenorhabditis elegans Hypothetical ...    28   6.5  
AC024746-1|AAO38586.1|  181|Caenorhabditis elegans Hypothetical ...    28   6.5  
U56965-2|AAB52667.3|  581|Caenorhabditis elegans Hypothetical pr...    27   8.6  

>Z68507-2|CAA92825.1|  475|Caenorhabditis elegans Hypothetical
           protein M18.3 protein.
          Length = 475

 Score = 46.4 bits (105), Expect = 2e-05
 Identities = 25/98 (25%), Positives = 51/98 (52%)
 Frame = +3

Query: 324 TQIIMEKLSYDCDSQIDKVINVLKSLKGPFSLIYYCKVTNKLYFTRDRFGRNSLLIHKXX 503
           +Q+ + KLS   +  ++ ++N +   +G +S+IYY +   KL+  RD FGR SL+ +   
Sbjct: 39  SQLHVSKLS---NGSVNSIVNEILEQQGSWSIIYYNQKLKKLFIGRDVFGRQSLVFNFES 95

Query: 504 XXXXXXXXXGTQYENYEVPVSHISVLDLNTHKILLYTW 617
                     T  +  E+P   ++V  L++   ++Y++
Sbjct: 96  MIFGCRTKPETSGKWIEIPFGQVTVFSLDSTDPVIYSY 133


>Z82053-5|CAB04833.1|  103|Caenorhabditis elegans Hypothetical
           protein T26E3.6 protein.
          Length = 103

 Score = 30.7 bits (66), Expect = 0.92
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = +3

Query: 51  DSMCGIFLELSCEKCSIVNDIDVLRRLKNRGPDHLQRKDFISEIGHH 191
           D  CG         C  ++D D  RR  N GPD   +   +  IG H
Sbjct: 50  DKRCGFEYSCMSGVCRYMSDFDAERRFSNFGPDMKCKDSRVCPIGLH 96


>Z72504-5|CAA96602.2|  812|Caenorhabditis elegans Hypothetical
           protein C29E6.1a protein.
          Length = 812

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -1

Query: 574 EMCDTGTS*FSYCVPKTLDNTKEFEFLCMSKEFLPNRSLVKYNLFVTLQ 428
           E  D  T  + YC+P T   + E+ F  +S  ++  +S++K+     L+
Sbjct: 104 EADDRFTFYWKYCLPSTRKCSGEYAFTYLSDRYMDQKSVIKWTTKANLE 152


>Z72504-4|CAH60755.1|  653|Caenorhabditis elegans Hypothetical
           protein C29E6.1b protein.
          Length = 653

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -1

Query: 574 EMCDTGTS*FSYCVPKTLDNTKEFEFLCMSKEFLPNRSLVKYNLFVTLQ 428
           E  D  T  + YC+P T   + E+ F  +S  ++  +S++K+     L+
Sbjct: 104 EADDRFTFYWKYCLPSTRKCSGEYAFTYLSDRYMDQKSVIKWTTKANLE 152


>Z30215-6|CAF31477.2| 1144|Caenorhabditis elegans Hypothetical
           protein F40F12.5 protein.
          Length = 1144

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 10/28 (35%), Positives = 18/28 (64%)
 Frame = -1

Query: 85  QLNSKNIPHMLSITVSKRSTAIQSFKWF 2
           ++N     H+L+++V KR    Q+F+WF
Sbjct: 206 RINQDQAIHLLAVSVEKRIEVYQNFEWF 233


>X91045-1|CAA62505.1|  693|Caenorhabditis elegans let-653 protein.
          Length = 693

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/49 (26%), Positives = 25/49 (51%)
 Frame = -1

Query: 574 EMCDTGTS*FSYCVPKTLDNTKEFEFLCMSKEFLPNRSLVKYNLFVTLQ 428
           E  D  T  + YC+P T   + E+ F  +S  ++  +S++K+     L+
Sbjct: 104 EADDRFTFYWKYCLPSTRKCSGEYAFTYLSDRYMDQKSVIKWTTKANLE 152


>AF125952-3|AAD14699.1|  475|Caenorhabditis elegans Hypothetical
           protein C01B4.7 protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +1

Query: 238 HYNLSKMNVASFCIMVIYLTNLGIAEPATRK*SWRNLVMIVTV 366
           H+ +S ++  S+C+  I    +GI  P      W  L +I+T+
Sbjct: 401 HFAVSAISFLSYCVQFISPLGVGILCPDNTPDQWSRLFIIITL 443


>AC006722-9|ABP57813.1|  475|Caenorhabditis elegans Hypothetical
           protein Y19D10A.4 protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +1

Query: 238 HYNLSKMNVASFCIMVIYLTNLGIAEPATRK*SWRNLVMIVTV 366
           H+ +S ++  S+C+  I    +GI  P      W  L +I+T+
Sbjct: 401 HFAVSAISFLSYCVQFISPLGVGILCPDNTPDQWSRLFIIITL 443


>U64848-1|AAB04881.2|  481|Caenorhabditis elegans Hypothetical
           protein C50E3.5 protein.
          Length = 481

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 16/62 (25%), Positives = 23/62 (37%)
 Frame = +3

Query: 384 NVLKSLKGPFSLIYYCKVTNKLYFTRDRFGRNSLLIHKXXXXXXXXXXXGTQYENYEVPV 563
           N+L  L       Y C   N+L F   +  R+S L +K               E  E+P+
Sbjct: 279 NLLTFLGSGILAQYTCSTDNRLNFLSHQHRRHSALFNKLFEVKMLQTRQSEDPETAEIPI 338

Query: 564 SH 569
            H
Sbjct: 339 GH 340


>AC024746-2|AAO38587.1|  163|Caenorhabditis elegans Hypothetical
           protein Y110A2AL.4b protein.
          Length = 163

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = +3

Query: 240 LQPLENECGILLYNGDIFDESWDSRTSDTQIIMEKLSYDCDSQIDKVINVLKSLK 404
           L P++N   IL  + DIF ++ D+    T   M  L++  D  +DK I   KS+K
Sbjct: 20  LPPVKN---ILQNHLDIFQKAVDAGDKATMSKMIPLNHISDETLDKFIKAHKSMK 71


>AC024746-1|AAO38586.1|  181|Caenorhabditis elegans Hypothetical
           protein Y110A2AL.4a protein.
          Length = 181

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 19/55 (34%), Positives = 29/55 (52%)
 Frame = +3

Query: 240 LQPLENECGILLYNGDIFDESWDSRTSDTQIIMEKLSYDCDSQIDKVINVLKSLK 404
           L P++N   IL  + DIF ++ D+    T   M  L++  D  +DK I   KS+K
Sbjct: 20  LPPVKN---ILQNHLDIFQKAVDAGDKATMSKMIPLNHISDETLDKFIKAHKSMK 71


>U56965-2|AAB52667.3|  581|Caenorhabditis elegans Hypothetical
           protein C15H9.5 protein.
          Length = 581

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 13/46 (28%), Positives = 22/46 (47%)
 Frame = -3

Query: 374 IDLTVTIITKFLHDYLRVAGSAIPRFVKYITIIQKDATFIFERL*C 237
           +DLTV ++ +  H YL +   A P    Y++I+       +  L C
Sbjct: 235 VDLTVDLVERNKHSYLSLQEIAKPEIYLYMSILYFGLAVYWSHLLC 280


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,569,873
Number of Sequences: 27780
Number of extensions: 296781
Number of successful extensions: 746
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 746
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1416829972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)