Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11l13
         (558 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    25   0.58 
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    23   1.3  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    23   1.8  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    21   7.2  
DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.      21   7.2  
EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine vasopre...    21   9.5  

>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +3

Query: 162 LDSPCTISYRRQGTLKSRRRCIRNEA-SFASSLGQMS 269
           ++SPC I+ RR G   +  R ++ +A    S++G M+
Sbjct: 582 VESPCCITMRRYGWTANMERIMKAQALRDTSTMGYMA 618


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 23.4 bits (48), Expect = 1.3
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 75  KAVGPQLMAEDIIRTYQTL 131
           KAVGP++   D++  +Q L
Sbjct: 274 KAVGPEITRTDLVPAFQNL 292


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -1

Query: 222 IGVCFSGCLDVDRKLYMGCPMQRNSK 145
           +G+  S C DV++K +      + SK
Sbjct: 374 VGIVGSACTDVEQKFFQVSKFDKRSK 399


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/30 (30%), Positives = 16/30 (53%)
 Frame = +3

Query: 135 IMKTWSFSALDSPCTISYRRQGTLKSRRRC 224
           I+  W FSAL S   + +  +  +K + +C
Sbjct: 143 ILAAWFFSALYSLPILIFYEEKIVKGKLQC 172


>DQ493452-1|ABF48588.1|  305|Tribolium castaneum hedgehog protein.
          Length = 305

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 44  HEALAPISWLEGRWST 91
           H A API W+   W +
Sbjct: 259 HWAFAPIRWVAKLWDS 274


>EF222295-1|ABN79655.1|  146|Tribolium castaneum arginine
           vasopressin-like peptide protein.
          Length = 146

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +3

Query: 168 SPCTISYRRQGTLKSRRRCIRNEASFASSLGQ 263
           +P T+  +R+G    R  CI   A    + G+
Sbjct: 72  TPETLRCQREGFFHEREPCIAGSAPCRKNTGR 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,187
Number of Sequences: 336
Number of extensions: 3050
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 13681771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)