Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11l13
(558 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006608-11|AAF39761.1| 360|Caenorhabditis elegans Hypothetical... 87 1e-17
U20861-2|ABD63243.1| 254|Caenorhabditis elegans Hypothetical pr... 72 3e-13
U20861-1|AAA62293.1| 302|Caenorhabditis elegans Hypothetical pr... 72 3e-13
Z75551-4|CAA99934.2| 228|Caenorhabditis elegans Hypothetical pr... 65 4e-11
AL110485-23|CAB60377.3| 770|Caenorhabditis elegans Hypothetical... 34 0.080
U80027-14|AAC48127.1| 199|Caenorhabditis elegans Hypothetical p... 32 0.24
U80029-6|AAB37586.1| 199|Caenorhabditis elegans Hypothetical pr... 31 0.43
U97404-2|AAB93309.1| 795|Caenorhabditis elegans Acid-sensing/am... 28 4.0
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 28 4.0
U53147-7|AAA96118.1| 202|Caenorhabditis elegans Hypothetical pr... 27 6.9
AC024842-6|AAY86285.1| 215|Caenorhabditis elegans Hypothetical ... 27 6.9
AC024696-10|AAK84509.1| 202|Caenorhabditis elegans Hypothetical... 27 6.9
AM748823-1|CAO72177.1| 491|Caenorhabditis elegans hexosaminidas... 27 9.1
AC103567-3|AAL35732.2| 438|Caenorhabditis elegans Hypothetical ... 27 9.1
AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical ... 27 9.1
>AC006608-11|AAF39761.1| 360|Caenorhabditis elegans Hypothetical
protein C15F1.1 protein.
Length = 360
Score = 86.6 bits (205), Expect = 1e-17
Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Frame = +2
Query: 29 NMSKIHEALAPISWLEGRW-STTDGRGYYPNIPDFTYHEDLEFLCIGQPMY-----NFLS 190
++ ++ + L PI +L G+W S G+ +P IP FT+ E++E G M N+ +
Sbjct: 192 DLRRLSQELTPIGFLVGKWRSEHGGKAIFPTIPKFTFGEEIEISIPGDAMQSAQALNYTA 251
Query: 191 TSRHPEKQTPMHQERGFLRIKPGTNELSFVVSHNFGLTSLEEGLCETETHQVILETVNLS 370
+ + +H E G++ +KP T E++ N G ++EEG +Q+ ++
Sbjct: 252 FAWSINDKDELHSEYGYISVKPNTKEVALTTVMNNGFVTVEEG--PVNGNQIRFRLKDIG 309
Query: 371 RISFAKPPFVKKIKRVFKLLSDDHLEATLYMETDTTPMSEHLKAVYKKIQ 520
RISF++ V + R + LL L+A L MET T M EH Y KI+
Sbjct: 310 RISFSRDLPVHDLVREWTLLDRSTLQARLNMETLTHGMQEHTFIRYNKIE 359
>U20861-2|ABD63243.1| 254|Caenorhabditis elegans Hypothetical
protein C28H8.5b protein.
Length = 254
Score = 71.7 bits (168), Expect = 3e-13
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 16/171 (9%)
Frame = +2
Query: 53 LAPISWLEGRW-STTDGRGYYPNIPDFTYHEDLEFLCIGQ------PMYNFLSTS---RH 202
L I+W+ GRW S G+ ++P IP FTY E ++ P+ N+ + +
Sbjct: 84 LKSIAWMVGRWRSEFGGKAFFPTIPKFTYGEQVDITIADNSQDTHTPLLNYTAFAWDINM 143
Query: 203 PEKQ-TPMHQERGFLRIKPGTNELSFVVSHNF----GLTSLEEGLCETETHQVILETVNL 367
P+ T +H E G++ ++ + VS N G ++EEG E+ +QV +
Sbjct: 144 PDGDPTEIHSENGYIAVEYDKEQEKEYVSLNTAMSNGFMTIEEG--ESGPNQVKFRLQRI 201
Query: 368 SRISFAKPPFVKKIKRVFKLLSDDHLEATLYMETD-TTPMSEHLKAVYKKI 517
RISF+ V+ + R + LL ++ LEA L M T T + EH +YKKI
Sbjct: 202 GRISFSHDSAVRIMFREWTLLDENRLEARLLMTTTITRRLMEHTAVIYKKI 252
>U20861-1|AAA62293.1| 302|Caenorhabditis elegans Hypothetical
protein C28H8.5a protein.
Length = 302
Score = 71.7 bits (168), Expect = 3e-13
Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 16/171 (9%)
Frame = +2
Query: 53 LAPISWLEGRW-STTDGRGYYPNIPDFTYHEDLEFLCIGQ------PMYNFLSTS---RH 202
L I+W+ GRW S G+ ++P IP FTY E ++ P+ N+ + +
Sbjct: 132 LKSIAWMVGRWRSEFGGKAFFPTIPKFTYGEQVDITIADNSQDTHTPLLNYTAFAWDINM 191
Query: 203 PEKQ-TPMHQERGFLRIKPGTNELSFVVSHNF----GLTSLEEGLCETETHQVILETVNL 367
P+ T +H E G++ ++ + VS N G ++EEG E+ +QV +
Sbjct: 192 PDGDPTEIHSENGYIAVEYDKEQEKEYVSLNTAMSNGFMTIEEG--ESGPNQVKFRLQRI 249
Query: 368 SRISFAKPPFVKKIKRVFKLLSDDHLEATLYMETD-TTPMSEHLKAVYKKI 517
RISF+ V+ + R + LL ++ LEA L M T T + EH +YKKI
Sbjct: 250 GRISFSHDSAVRIMFREWTLLDENRLEARLLMTTTITRRLMEHTAVIYKKI 300
>Z75551-4|CAA99934.2| 228|Caenorhabditis elegans Hypothetical
protein T28H10.2 protein.
Length = 228
Score = 64.9 bits (151), Expect = 4e-11
Identities = 46/163 (28%), Positives = 83/163 (50%), Gaps = 4/163 (2%)
Frame = +2
Query: 38 KIHEALAPISWLEGRWSTTD-GRGYYPNIPDFTYHEDLEF-LCIGQPM--YNFLSTSRHP 205
+++ L PI L GRW G+ +P IP F Y E++E + G + N+ + +
Sbjct: 67 RLNPQLQPIHQLVGRWKGEHTGKVTFPTIPTFKYTEEVEISIPEGSNIRSLNYTAAAWSS 126
Query: 206 EKQTPMHQERGFLRIKPGTNELSFVVSHNFGLTSLEEGLCETETHQVILETVNLSRISFA 385
+K+ +H+E G++ IKP T E+ + G ++EEG + +L+ ++ RISF
Sbjct: 127 DKED-LHRESGYIIIKPNTREVILTTVMSNGFITVEEGSMVGNNIKFMLK--DIGRISFV 183
Query: 386 KPPFVKKIKRVFKLLSDDHLEATLYMETDTTPMSEHLKAVYKK 514
+ + + R + L + +L A L ++T + M EH +Y K
Sbjct: 184 RDEHLHNLIREW-TLDNGYLRARLSIQTLSHRMQEHTSILYTK 225
>AL110485-23|CAB60377.3| 770|Caenorhabditis elegans Hypothetical
protein Y46G5A.29 protein.
Length = 770
Score = 33.9 bits (74), Expect = 0.080
Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 18/107 (16%)
Frame = +2
Query: 53 LAPISWLEGRWSTTDGRGY------YP-NIPDFTYHEDLEF-----LCIGQPMYNFLSTS 196
L P ++L G W +T +G+ YP ++ Y+E + F L G P N+ +T
Sbjct: 588 LMPFAFLLGEWESTI-KGWNNHTTDYPADMDGMIYNETITFSVAPSLSFGTPFVNYTATM 646
Query: 197 RHPEKQTPMHQERGFLRIKP------GTNELSFVVSHNFGLTSLEEG 319
+ + +HQ GFL I+ T+ + N GL +EEG
Sbjct: 647 TSLDDPSNIHQYNGFLTIQQYKDNENSTDRGALTTVSNTGLIMIEEG 693
>U80027-14|AAC48127.1| 199|Caenorhabditis elegans Hypothetical
protein T28A11.19 protein.
Length = 199
Score = 32.3 bits (70), Expect = 0.24
Identities = 19/68 (27%), Positives = 35/68 (51%)
Frame = -2
Query: 209 FQGALTSIGNCTWAVQCRETPSLHDM*SLVCSDNILCHQLWTNGLPTRKWAPKLHESSTC 30
F+ + S+ C ++C+ET + S +++ + L + +P K +L + TC
Sbjct: 73 FRKSCLSMAECFDLIECKETGKFSRGKRIKDSCDVM-NYLSKDFVPCLKRLERLDPAPTC 131
Query: 29 FNRNKPFS 6
FN+ KPFS
Sbjct: 132 FNKWKPFS 139
>U80029-6|AAB37586.1| 199|Caenorhabditis elegans Hypothetical
protein T20D4.11 protein.
Length = 199
Score = 31.5 bits (68), Expect = 0.43
Identities = 18/67 (26%), Positives = 34/67 (50%)
Frame = -2
Query: 209 FQGALTSIGNCTWAVQCRETPSLHDM*SLVCSDNILCHQLWTNGLPTRKWAPKLHESSTC 30
F+ + S+ C ++C+ET + S +++ + L N +P + KL+ + TC
Sbjct: 73 FRKSCVSMATCFDLIECKETGKFSRGKRIKDSCDVM-NYLSKNFVPCLRRLEKLNPAPTC 131
Query: 29 FNRNKPF 9
F + KPF
Sbjct: 132 FKKWKPF 138
>U97404-2|AAB93309.1| 795|Caenorhabditis elegans
Acid-sensing/amiloride-sensitiveion channel family
protein 1 protein.
Length = 795
Score = 28.3 bits (60), Expect = 4.0
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = -2
Query: 224 ASASAFQGALTSIGNCTWAVQCRETPSLHDM*SLVCSDNILCH 96
ASA FQ +++ NC W +C E+ + D+ + S +CH
Sbjct: 286 ASAQKFQ--VSTCSNCDWLGKCEESDDM-DLEEEIDSKTCICH 325
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 28.3 bits (60), Expect = 4.0
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 1/62 (1%)
Frame = -2
Query: 326 HTVPLRVKSGQSCGSRRKTAHLS-QA*CEGSLVPDASASAFQGALTSIGNCTWAVQCRET 150
H P V G GSR +A A + S +P ASA+A TS T T
Sbjct: 629 HVEPASVAGGSQAGSRAPSAGPGPSATPDSSTIPSASAAADAQTTTSSETSTPGEPTSST 688
Query: 149 PS 144
PS
Sbjct: 689 PS 690
>U53147-7|AAA96118.1| 202|Caenorhabditis elegans Hypothetical
protein C01B7.7 protein.
Length = 202
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 209 FQGALTSIGNCTWAVQCRETPSLHDM*SLVCSDNILCHQLWTNGLPTRKWAPKLHE-SST 33
F+G+ S+ NC A+ C+ + + H+ + C + + + KL E SS
Sbjct: 69 FKGSCDSLHNCFDALDCQTSSTDHETSDISGMIKTYCDTIIYISTKFVECSDKLEEKSSQ 128
Query: 32 CFNRNKPF 9
CF PF
Sbjct: 129 CFENWDPF 136
>AC024842-6|AAY86285.1| 215|Caenorhabditis elegans Hypothetical
protein Y59H11AR.5 protein.
Length = 215
Score = 27.5 bits (58), Expect = 6.9
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 11 TVCFG*NMSKIHEALAPISWLEGRWSTTDGRGYYPNIPDFTYH 139
T+C +SK L W +G S DG + N PD Y+
Sbjct: 141 TLCKASRLSKYCNTLTSFQWTDGSASGLDGLIWNNNQPDNNYN 183
>AC024696-10|AAK84509.1| 202|Caenorhabditis elegans Hypothetical
protein F07B7.13 protein.
Length = 202
Score = 27.5 bits (58), Expect = 6.9
Identities = 18/68 (26%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Frame = -2
Query: 209 FQGALTSIGNCTWAVQCRETPSLHDM*SLVCSDNILCHQLWTNGLPTRKWAPKLHE-SST 33
F+G+ S+ NC A+ C+ + + H+ + C + + + KL E SS
Sbjct: 69 FKGSCDSLHNCFDALDCQTSSTDHETSDISGMIKTYCDTIIYISTKFVECSDKLEEKSSQ 128
Query: 32 CFNRNKPF 9
CF PF
Sbjct: 129 CFENWDPF 136
>AM748823-1|CAO72177.1| 491|Caenorhabditis elegans hexosaminidase
protein.
Length = 491
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 389 PPFVKKIKRVFKLLSDDHLEATLYMETDTTPMSEHLKAVYKKI 517
PP V+ + FKLLS H++ L D P S ++ + + +
Sbjct: 62 PPRVEYLIEFFKLLSKHHVDGILIEYEDMFPYSGDIEEIRRDL 104
>AC103567-3|AAL35732.2| 438|Caenorhabditis elegans Hypothetical
protein Y51F10.5 protein.
Length = 438
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/43 (30%), Positives = 22/43 (51%)
Frame = +2
Query: 389 PPFVKKIKRVFKLLSDDHLEATLYMETDTTPMSEHLKAVYKKI 517
PP V+ + FKLLS H++ L D P S ++ + + +
Sbjct: 62 PPRVEYLIEFFKLLSKHHVDGILIEYEDMFPYSGDIEEIRRDL 104
>AC024791-5|AAF60661.2| 468|Caenorhabditis elegans Hypothetical
protein Y47G6A.14 protein.
Length = 468
Score = 27.1 bits (57), Expect = 9.1
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = -2
Query: 335 SLSHTVPLRVKSGQSCGSRRKTAHLSQA*CEGSLVPDASASAFQGALTSI 186
+L V L +KS CGS +H++Q + P AS F LTSI
Sbjct: 127 NLGAEVDLDIKSLALCGSCALRSHVTQGHETVAYFPVASGMNFASQLTSI 176
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,919,483
Number of Sequences: 27780
Number of extensions: 271717
Number of successful extensions: 667
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 660
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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