Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11l10
(717 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_36821| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.40
SB_14316| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.71
SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_40080| Best HMM Match : DUF1267 (HMM E-Value=2.6) 29 2.8
SB_43314| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13) 29 3.8
SB_39593| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_20363| Best HMM Match : Involucrin (HMM E-Value=0.31) 28 8.7
SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23) 28 8.7
SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 28 8.7
>SB_36821| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1503
Score = 32.3 bits (70), Expect = 0.40
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Frame = -1
Query: 339 AWPSTTSTFTLALDSRF-FLGTFWSASTSF---SYWCLFIIRRLSRIF 208
AWP T T AL + + +LG + +T+F S WCLFI+ + R +
Sbjct: 707 AWPEPTPLITSALRADWTWLGRRYGLATTFLIISLWCLFILAKDRRTY 754
>SB_14316| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1472
Score = 31.5 bits (68), Expect = 0.71
Identities = 19/80 (23%), Positives = 45/80 (56%)
Frame = +2
Query: 2 INSHGNSGIACCKQVLAKYLHYKLFSELCLTTVQQLLKRKDAVDQKPMEHNLSRKNLKNE 181
I + GN+G+ C+ V+ YL++ +EL + +V L + +++K ++ LK+
Sbjct: 490 IKAIGNAGLRACQHVILAYLNFDKCTELRVESVWAL---RRLINEK--NTKVTMTVLKHF 544
Query: 182 VGLQLPPEQKILLSLLMMNK 241
+ + PE ++ ++L+++K
Sbjct: 545 INVTNHPEVRMACAVLLLDK 564
>SB_59580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 999
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +1
Query: 115 KKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQ 240
K+ + R KA + E KEL+KR + A + +S KS DE+
Sbjct: 812 KEKQERLKAKKKEEEEKELEKRSKTKDAKKYFESWKSKKDEE 853
>SB_40080| Best HMM Match : DUF1267 (HMM E-Value=2.6)
Length = 109
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +2
Query: 44 VLAKYLHYKLFSELCLTTVQQLLKRKDAVDQKPMEHNLSRKNLKNEVGLQ 193
VL + HY + L + ++L +R +D+ E+ L R+NL+ + L+
Sbjct: 14 VLCNHPHYLVNELLDIQLNEELSERNSVIDETLEENQLERENLEERMSLK 63
>SB_43314| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 326
Score = 29.1 bits (62), Expect = 3.8
Identities = 16/51 (31%), Positives = 25/51 (49%)
Frame = +2
Query: 503 FCFSLMVSKLKYLVNSHVSSNLLNYRDSTTFSIEIISPKYSCKKGLF*EMI 655
FC+ M S +NS + + LN++ ST E++ K S G F + I
Sbjct: 183 FCWQPMCS-----INSEIRTTFLNFKPSTIADFELLREKLSLLNGTFHQYI 228
>SB_15549| Best HMM Match : ADH_zinc_N (HMM E-Value=9.4e-13)
Length = 562
Score = 29.1 bits (62), Expect = 3.8
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = +1
Query: 103 TVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQAP 246
TV ++KG + G P+S E KK+ K D++ P
Sbjct: 473 TVAKEKGASERRRRGRSPKSDEQKKKDEDSKPEEAKPEEPKEDEKSKP 520
>SB_39593| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 111
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/51 (25%), Positives = 24/51 (47%)
Frame = +1
Query: 88 SDDGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQ 240
+DD E+ G P + +P+ K LKK + ++D AK + ++
Sbjct: 58 ADDSDEESEEDGEWDPSKDNPKPQKKALKKGTKRKRKAHSQDGAKEVNGKE 108
>SB_20363| Best HMM Match : Involucrin (HMM E-Value=0.31)
Length = 353
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 94 DGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQ 240
+G E+ + RP+ NG+Q E + ++ ++ S SS DE+
Sbjct: 106 EGQEEKEQSDKKRPQTNGSQEEKGQPSEKNEEKPNIASEHSTPSSGDEK 154
>SB_10643| Best HMM Match : ShTK (HMM E-Value=2.9e-23)
Length = 2123
Score = 27.9 bits (59), Expect = 8.7
Identities = 13/49 (26%), Positives = 24/49 (48%)
Frame = +1
Query: 94 DGSTVVEKKGRGRPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQ 240
+G E+ + RP+ NG+Q E + ++ ++ S SS DE+
Sbjct: 384 EGQEEKEQSDKKRPQTNGSQEEKGQPSEKNEEKPNIASEHSTPSSGDEK 432
>SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 361
Score = 27.9 bits (59), Expect = 8.7
Identities = 11/38 (28%), Positives = 21/38 (55%)
Frame = +1
Query: 130 RPKANGTQPESKELKKRGRPPAATRTKDSAKSSDDEQA 243
RP + T+P + K P A RT+++A+ +++ A
Sbjct: 33 RPTSTSTKPTTASTKPTSPPSQAARTRNTAEKPEEKPA 70
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,974,785
Number of Sequences: 59808
Number of extensions: 326624
Number of successful extensions: 1027
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 932
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1901817086
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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