Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11l09
         (670 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    26   0.32 
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    26   0.32 
AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    23   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   6.9  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.1  

>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 350 LCGISHHSTGGAGPVFSSLTMKYNISSAILRT 255
           +C   HH+T   GP F    +  N+S+   +T
Sbjct: 329 ICNEGHHATRKMGPEFRERLLNVNLSAVDQKT 360


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 25.8 bits (54), Expect = 0.32
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 350 LCGISHHSTGGAGPVFSSLTMKYNISSAILRT 255
           +C   HH+T   GP F    +  N+S+   +T
Sbjct: 329 ICNEGHHATRKMGPEFRERLLNVNLSAVDQKT 360


>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 22.6 bits (46), Expect = 3.0
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = +1

Query: 124 RIKQLFSKDEKHITMKFRAVMNN 192
           +I+Q+F  ++K+I+     V+NN
Sbjct: 287 KIRQVFPNEKKNISEFINVVLNN 309


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 6.9
 Identities = 10/27 (37%), Positives = 13/27 (48%)
 Frame = -2

Query: 342 YFTP*YRRGWSSVFIADNEIQHIVCYP 262
           YF       + S F  DNE Q ++ YP
Sbjct: 120 YFKDLVAEAYVSPFRIDNESQELLKYP 146


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like protein
            protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.1
 Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +1

Query: 109  SSH-FARIKQLFSKDEKHITMKFRAVMNNSS 198
            SSH  A +++L  K E H   +  +  +NSS
Sbjct: 987  SSHPLAALQKLCDKTETHTNNRTHSATSNSS 1017


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,256
Number of Sequences: 336
Number of extensions: 3879
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)