Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11l08
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    23   2.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    23   2.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    23   2.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    23   2.3  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.4  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    21   7.2  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    21   7.2  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    21   7.2  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   7.2  

>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
            variant 2 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 330  RVNETYLQIRKGKPEKLGWINIYGNILTSEPARKH 434
            RVN    + RK   + LG  N YGN   +  AR H
Sbjct: 1474 RVNSVMAERRKSHMQTLGAKNEYGN--NNVVARNH 1506


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
            variant 1 protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 330  RVNETYLQIRKGKPEKLGWINIYGNILTSEPARKH 434
            RVN    + RK   + LG  N YGN   +  AR H
Sbjct: 1474 RVNSVMAERRKSHMQTLGAKNEYGN--NNVVARNH 1506


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase CHS1B
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 330  RVNETYLQIRKGKPEKLGWINIYGNILTSEPARKH 434
            RVN    + RK   + LG  N YGN   +  AR H
Sbjct: 1474 RVNSVMAERRKSHMQTLGAKNEYGN--NNVVARNH 1506


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase CHS1A
            protein.
          Length = 1558

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 14/35 (40%), Positives = 17/35 (48%)
 Frame = +3

Query: 330  RVNETYLQIRKGKPEKLGWINIYGNILTSEPARKH 434
            RVN    + RK   + LG  N YGN   +  AR H
Sbjct: 1474 RVNSVMAERRKSHMQTLGAKNEYGN--NNVVARNH 1506


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 6/21 (28%), Positives = 13/21 (61%)
 Frame = +3

Query: 255 WTRPVLVIKRKKNPKTSHQAL 317
           W + ++V+K KK  ++  Q +
Sbjct: 212 WAKKLIVVKDKKKSRSDEQTI 232


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 280 FITRTGLVHFLQTSIQ*LAFICT 212
           F TRT  ++     ++ LAF CT
Sbjct: 48  FKTRTYFIYAFVAPVKCLAFFCT 70


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 280 FITRTGLVHFLQTSIQ*LAFICT 212
           F TRT  ++     ++ LAF CT
Sbjct: 281 FKTRTYFIYAFVAPVKCLAFFCT 303


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -1

Query: 280 FITRTGLVHFLQTSIQ*LAFICT 212
           F TRT  ++     ++ LAF CT
Sbjct: 281 FKTRTYFIYAFVAPVKCLAFFCT 303


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 78  WSGVTVVAMSFISNLCWN 131
           WS   +V + +I N C+N
Sbjct: 275 WSAFFIVNVLYICNQCYN 292


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,773
Number of Sequences: 336
Number of extensions: 3529
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)