Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11l08
(688 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 36 0.031
SB_14478| Best HMM Match : DUF1168 (HMM E-Value=3) 34 0.094
SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05) 34 0.094
SB_50825| Best HMM Match : DUF1168 (HMM E-Value=4.1) 33 0.29
SB_6168| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.87
SB_18215| Best HMM Match : DUF1168 (HMM E-Value=3.7) 31 1.2
SB_8915| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_28259| Best HMM Match : Filament (HMM E-Value=0.2) 30 1.5
SB_58571| Best HMM Match : PLAT (HMM E-Value=1.2e-22) 30 2.0
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 30 2.0
SB_23498| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_151| Best HMM Match : zf-CCHC (HMM E-Value=8.9e-05) 29 2.7
SB_44813| Best HMM Match : Crystallin (HMM E-Value=0.26) 29 3.5
SB_45285| Best HMM Match : AT_hook (HMM E-Value=0.13) 29 4.7
SB_12589| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_9823| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.7
SB_3573| Best HMM Match : DUF1168 (HMM E-Value=1) 29 4.7
SB_54381| Best HMM Match : Trigger_C (HMM E-Value=0.55) 28 6.2
SB_26157| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_5916| Best HMM Match : R3H (HMM E-Value=2.9e-10) 28 6.2
SB_47020| Best HMM Match : Profilin (HMM E-Value=1.8) 28 6.2
SB_30340| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.2
SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55) 28 6.2
SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8) 28 6.2
SB_56325| Best HMM Match : Ribosomal_L14e (HMM E-Value=0.84) 28 8.1
SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_46952| Best HMM Match : Gemini_AL2 (HMM E-Value=1.3) 28 8.1
SB_12964| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31) 28 8.1
SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_12782| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 35.9 bits (79), Expect = 0.031
Identities = 39/152 (25%), Positives = 67/152 (44%), Gaps = 3/152 (1%)
Frame = +2
Query: 173 NRKGEPQKGKLIDRANERKSLDARLKEMD--EAGPSNKKEEEPQDFXXXXXXWVPSERDI 346
N +P+K KL D++ ++ +A K D E P +K E+ P+D P ++
Sbjct: 249 NADEKPEK-KLDDKSEDKPEDNADEKPEDNPEDKPEDKTEDRPED--------KPEDKLE 299
Query: 347 STDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVKTGYDEITIA 526
E + K + T+++TS+KT S S ++ T+ +KT
Sbjct: 300 DKPKENQQNKPEDKQQTTPKTSRKTSQKT---SLNASRKTSRKTSLKRSLKTSPKTSPKT 356
Query: 527 NFLQSLR-AQKTEPYLQITTAPKRISMDSDTT 619
++SL+ + KT P + T+PK S S T
Sbjct: 357 MRMKSLKTSPKTSPEISPRTSPKTSSKTSPKT 388
>SB_14478| Best HMM Match : DUF1168 (HMM E-Value=3)
Length = 376
Score = 34.3 bits (75), Expect = 0.094
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 2/152 (1%)
Frame = +2
Query: 173 NRKGEPQKGKLIDRANERKSLDARLKEMDEAGPSNKKEEEP-QDFXXXXXXWVPSERDIS 349
+ +G + +++ R K+L R +D+AGP +E + VP E D+
Sbjct: 120 DEEGRVVRRRIVGRTVTTKTLTTRTVTIDQAGPEETPTKEVLESAEPVKGTEVPEEGDV- 178
Query: 350 TDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTN-NNDPVKTGYDEITIA 526
E K R+ + + + T T + L P E V + +K G DE +
Sbjct: 179 --EEFVDEKGRIVRRIVKRT-VVTKRIVLRPGEDTPETVEMDISMEQGELKPG-DEDEVE 234
Query: 527 NFLQSLRAQKTEPYLQITTAPKRISMDSDTTL 622
F+ +K ++ TT+ K + +DS TL
Sbjct: 235 EFVDE-EGRKVRRIVRRTTSTKTVVLDSGETL 265
>SB_39858| Best HMM Match : Spectrin (HMM E-Value=2.6e-05)
Length = 3397
Score = 34.3 bits (75), Expect = 0.094
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 2/152 (1%)
Frame = +2
Query: 173 NRKGEPQKGKLIDRANERKSLDARLKEMDEAGPSNKKEEEP-QDFXXXXXXWVPSERDIS 349
+ +G + +++ R K+L R +D+AGP +E + VP E D+
Sbjct: 2332 DEEGRVVRRRIVGRTVTTKTLTTRTVTIDQAGPEETPTKEVLESAEPVKGTEVPEEGDV- 2390
Query: 350 TDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTN-NNDPVKTGYDEITIA 526
E K R+ + + + T T + L P E V + +K G DE +
Sbjct: 2391 --EEFVDEKGRIVRRIVKRT-VVTKRIVLRPGEDTPETVEMDISMEQGELKPG-DEDEVE 2446
Query: 527 NFLQSLRAQKTEPYLQITTAPKRISMDSDTTL 622
F+ +K ++ TT+ K + +DS TL
Sbjct: 2447 EFVDE-EGRKVRRIVRRTTSTKTVVLDSGETL 2477
Score = 33.1 bits (72), Expect = 0.22
Identities = 36/153 (23%), Positives = 63/153 (41%), Gaps = 3/153 (1%)
Frame = +2
Query: 173 NRKGEPQKGKLIDRANERKSLDARLKEMDEAGPSNKKEEEP-QDFXXXXXXWVPSERDIS 349
+ +G + +++ R K+L R D+AGP +E + VP E D+
Sbjct: 2063 DEEGRVVRRRIVRRTVTTKTLTTRTVTSDQAGPEEMPTKEVLESAEPVKGTEVPEEGDVE 2122
Query: 350 TDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTK--PTNNNDPVKTGYDEITI 523
+ E R R + +++ T + L P E V P + +K G DE +
Sbjct: 2123 EFVDEEGRIIR--RIVKR--TVVTKRIVLRPGEDTPETVEMAIPIEQGE-LKPG-DEDEV 2176
Query: 524 ANFLQSLRAQKTEPYLQITTAPKRISMDSDTTL 622
F+ +K ++ TT+ K + +DS TL
Sbjct: 2177 EEFVDE-EGRKVRRIVRRTTSTKTVVLDSGETL 2208
>SB_50825| Best HMM Match : DUF1168 (HMM E-Value=4.1)
Length = 543
Score = 32.7 bits (71), Expect = 0.29
Identities = 36/144 (25%), Positives = 59/144 (40%), Gaps = 3/144 (2%)
Frame = +2
Query: 200 KLIDRANERKSLDARLKEMDEAGPSNKKEEEP-QDFXXXXXXWVPSERDISTDSEREARK 376
+++ R K+L R D+AGP EE VP E D+ + E R
Sbjct: 396 RIVRRTVTTKTLTTRTVTSDQAGPEEMPTEEAFLSAEPVKGTEVPEEGDVEEFVDEEGRI 455
Query: 377 ARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTK--PTNNNDPVKTGYDEITIANFLQSLRA 550
R + +++ T + L P + E V P + +K G DE + F+
Sbjct: 456 VR--RIVKR--TVVTKRIVLRPGEDMPETVEMAIPMEQGE-LKPG-DEDEVEEFVDE-EG 508
Query: 551 QKTEPYLQITTAPKRISMDSDTTL 622
+K ++ TT+ K + +DS TL
Sbjct: 509 RKVRRIVRRTTSTKTVVLDSGETL 532
Score = 31.1 bits (67), Expect = 0.87
Identities = 35/143 (24%), Positives = 58/143 (40%), Gaps = 2/143 (1%)
Frame = +2
Query: 200 KLIDRANERKSLDARLKEMDEAGPSNKKEEEP-QDFXXXXXXWVPSERDISTDSEREARK 376
+++ R K++ R D+AGP EE VP E D+ E K
Sbjct: 128 RIVRRTVTTKTVTTRTVTSDQAGPEEMPTEEAFLSAEPVKGTEVPEEGDV---EEFVDEK 184
Query: 377 ARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTN-NNDPVKTGYDEITIANFLQSLRAQ 553
R+ + + + T T + L P+ E V + +K G DE + F+ +
Sbjct: 185 GRIVRRIVKRT-VVTKRIVLRPAEDTPETVEMDISMEQGELKPG-DEDEVEEFVDE-EGR 241
Query: 554 KTEPYLQITTAPKRISMDSDTTL 622
K ++ TT+ K + +DS TL
Sbjct: 242 KVRRIVRRTTSTKTVVLDSGETL 264
>SB_6168| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 31.1 bits (67), Expect = 0.87
Identities = 21/71 (29%), Positives = 34/71 (47%)
Frame = +2
Query: 350 TDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVKTGYDEITIAN 529
++SE + A K RQ+T T K+TL K ++ TK + G D ++AN
Sbjct: 332 SNSESDVEAAPSKKIRRQFTE--TQKRTLFAIFKETKKPTKDMQKAVAEELGLDLNSVAN 389
Query: 530 FLQSLRAQKTE 562
F + R + T+
Sbjct: 390 FFMNARRRHTD 400
>SB_18215| Best HMM Match : DUF1168 (HMM E-Value=3.7)
Length = 338
Score = 30.7 bits (66), Expect = 1.2
Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 3/144 (2%)
Frame = +2
Query: 200 KLIDRANERKSLDARLKEMDEAGPSNKKEEEP-QDFXXXXXXWVPSERDISTDSEREARK 376
+++ R K++ R D+AGP EE VP E D+ + E R
Sbjct: 101 RIVRRTVTTKTVTTRTVTSDQAGPEEMPTEEAFLSAVPVEGTEVPEEGDVEEFVDEEGRI 160
Query: 377 ARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTK--PTNNNDPVKTGYDEITIANFLQSLRA 550
R + +++ T + L P E V P + +K G DE + F+
Sbjct: 161 IR--RIVKR--TVVTKRIVLRPGEDTPETVEMAIPIEQGE-LKPG-DEDEVEEFVDE-EG 213
Query: 551 QKTEPYLQITTAPKRISMDSDTTL 622
+K ++ TT+ K + +DS TL
Sbjct: 214 RKVRRIVRRTTSTKTVVLDSGETL 237
>SB_8915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 482
Score = 30.7 bits (66), Expect = 1.2
Identities = 26/112 (23%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Frame = +2
Query: 212 RANERKSLDARLKEMDEAGPSNKKEEEPQ----------DFXXXXXXWVPSERDISTDSE 361
R+ ER+S A +E S ++ EEP+ D PS + +SE
Sbjct: 369 RSRERRSKYASTEEQTNGEESQEEAEEPEDDAPDDDDAPDVEGNGSQESPSVQPPEMESE 428
Query: 362 REARKARLDKYLRQYTNKRTSKKTLTPSNKV-SEVVTKPTNNNDPVKTGYDE 514
E + D + T K + K++ V E+V++ NN + ++T + +
Sbjct: 429 EEDEQDSDDPEINMLTEKLRNAKSVEEVRAVHQELVSRHANNREVIRTAFSK 480
>SB_51335| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 576
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 4/103 (3%)
Frame = +2
Query: 164 ITANRKGEPQKGKLIDRANERKSLDARLKEMDEAGPSNKKEEEPQDFXXXXXXWVPSERD 343
+T RK +PQK K + KS + E E K+++E + + SE +
Sbjct: 121 LTPVRKRQPQKRKKVQSKTNNKSDNEEEDERQEK-KIRKQKQEKRKRKTVKADFNSSEEE 179
Query: 344 ISTDSEREARKARLDKYLRQYTNK----RTSKKTLTPSNKVSE 460
+S+ + + + K +Q NK ++ KKT+ ++ E
Sbjct: 180 VSSQKTKASSRKDQKKMNKQMANKGKGAKSKKKTIESNSSDDE 222
>SB_28259| Best HMM Match : Filament (HMM E-Value=0.2)
Length = 349
Score = 30.3 bits (65), Expect = 1.5
Identities = 22/81 (27%), Positives = 39/81 (48%), Gaps = 2/81 (2%)
Frame = +2
Query: 344 ISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNN--NDPVKTGYDEI 517
I + + ++ +LD +RQ T KR S + +T N + + K T ND V+T Y+
Sbjct: 9 IRLEKKLSEQQEKLDSNIRQSTEKRHSLERITTENTILQNEVKATRKALND-VRTKYE-- 65
Query: 518 TIANFLQSLRAQKTEPYLQIT 580
+ ++ L Q +Q+T
Sbjct: 66 ALVTEMRELNLQLQVSKVQVT 86
>SB_58571| Best HMM Match : PLAT (HMM E-Value=1.2e-22)
Length = 651
Score = 29.9 bits (64), Expect = 2.0
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Frame = +2
Query: 65 NWLLVEWSDGGRDVIYIKSVLEPNVQELKVGVLITANRKGEPQKGKLIDRANER-KSLDA 241
NWL V+ +DG D SV+ V L ++T RK P++ K + ++ SLD
Sbjct: 562 NWLAVDENDGSVDRTLTSSVIVIPVNML----IVTVFRKLAPKQSKASNVDDDNCSSLDD 617
Query: 242 RLKEMDEAGPSNKKEEEPQD 301
E D+ G S +++ D
Sbjct: 618 DNNEDDDGGGSFDDDDDDFD 637
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 29.9 bits (64), Expect = 2.0
Identities = 25/105 (23%), Positives = 50/105 (47%), Gaps = 4/105 (3%)
Frame = +2
Query: 323 WVPSERDISTDSEREARKAR-LDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVK 499
W R + ++ ++ R + + LR T KR K +++ ++ + T+ ND ++
Sbjct: 3662 WEEERRKLKEEANYANKELRSIQEELR--TLKREMKSLKADASRKNDKTAELTHENDKIR 3719
Query: 500 TGYDEITIANFLQSLR---AQKTEPYLQITTAPKRISMDSDTTLN 625
D+ IAN L +L+ A+ E Y + + I+ D TT++
Sbjct: 3720 QEKDD--IANELMNLKEKFAKVEEEYRVLVKDTESINRDKQTTVS 3762
>SB_23498| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 661
Score = 29.5 bits (63), Expect = 2.7
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +3
Query: 333 VNETYLQIRKGKPEKLGWINIYGNILTSEP 422
V + LQ+ KG+P K W ++G++L +P
Sbjct: 297 VRKKLLQVAKGRPCKHVWPEVHGHLLQGQP 326
>SB_151| Best HMM Match : zf-CCHC (HMM E-Value=8.9e-05)
Length = 1382
Score = 29.5 bits (63), Expect = 2.7
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 4/119 (3%)
Frame = +2
Query: 335 ERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVKTGYDE 514
+R+ + D E + + K LR S+ L S SE T+ + D K
Sbjct: 686 DREYAQDEEDQIDVFDVKKSLRPVLKALRSRSLLQISEGTSEEPTEAKSMADKDKETSAS 745
Query: 515 ITIANFLQSLRAQKTEPYLQITTAPKRI----SMDSDTTLNFHEWFRELFRSFERVKCE 679
T + +R ++ + +IT A KRI + D+ T F + +L + FE CE
Sbjct: 746 STGTDSETDIRTRRKQLRCKITRAIKRIRDLTTTDTTTAKRFRKELDQLRKDFESA-CE 803
>SB_44813| Best HMM Match : Crystallin (HMM E-Value=0.26)
Length = 688
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/54 (31%), Positives = 28/54 (51%), Gaps = 2/54 (3%)
Frame = +2
Query: 359 EREARKARLDKYLRQ-YTNKR-TSKKTLTPSNKVSEVVTKPTNNNDPVKTGYDE 514
++E + R +KY R+ Y + R + +TLTP K +V N +TG D+
Sbjct: 48 KKELIELRKEKYSRKLYASSRHVNDETLTPHTKYVDVEVSTAEKNSTEETGKDK 101
>SB_45285| Best HMM Match : AT_hook (HMM E-Value=0.13)
Length = 440
Score = 28.7 bits (61), Expect = 4.7
Identities = 23/102 (22%), Positives = 47/102 (46%), Gaps = 8/102 (7%)
Frame = +2
Query: 218 NERKSLDARLKEMDEAGPSNKKEEEPQDFXXXXXXWVPS-ERDISTDSEREARKARLDKY 394
+E+K+ L + E + + + D + S + D+S++S+ E+ ++
Sbjct: 257 HEKKATQMELNVIPEDKQESDDDSDISDVSSVHTSDLSSFDEDLSSESDNESTPGAKEES 316
Query: 395 LRQYTNKRTSKKTLT-------PSNKVSEVVTKPTNNNDPVK 499
+ Q +K + KT NKVS+ TKP+ ++D +K
Sbjct: 317 MPQDRSKPRTNKTNDIKKQAHGEMNKVSKHATKPSGDSDSLK 358
>SB_12589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1255
Score = 28.7 bits (61), Expect = 4.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 333 VNETYLQIRKGKPEKLGWINIYGNILTSEPAR 428
V + LQ+ KG+P K W ++G++L P +
Sbjct: 202 VRKRLLQVAKGRPCKHVWPEVHGHLLQDAPPK 233
>SB_9823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1329
Score = 28.7 bits (61), Expect = 4.7
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = +2
Query: 335 ERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNN 484
E I T S A K + + N++ LTP+N ++E+VT P +N
Sbjct: 339 ETQIETTSIFGATNQTFSKRVTRL-NEQEKSTILTPTNTIAEIVTMPESN 387
>SB_3573| Best HMM Match : DUF1168 (HMM E-Value=1)
Length = 782
Score = 28.7 bits (61), Expect = 4.7
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Frame = +2
Query: 173 NRKGEPQKGKLIDRANERKSLDARLKEMDEAGPSNKKEEEP-QDFXXXXXXWVPSERDIS 349
+ +G K +++ R K+L R D+AGP EE + VP E D+
Sbjct: 594 DEEGRVVKRRIVRRTVTTKTLTTRTVTSDQAGPEEMPTEEVLESAEPVKGTEVPEEGDVE 653
Query: 350 TDSEREARKAR 382
+ E R R
Sbjct: 654 EFVDEEGRIIR 664
>SB_54381| Best HMM Match : Trigger_C (HMM E-Value=0.55)
Length = 607
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 386 DKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNN 487
+K TNK T++ T +NKV+ VTK NN
Sbjct: 219 NKVTNNVTNKVTNEVTNKVNNKVTNKVTKKVTNN 252
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 1/57 (1%)
Frame = +2
Query: 389 KYLRQYTNKRTSKKTLTPSNKV-SEVVTKPTNNNDPVKTGYDEITIANFLQSLRAQK 556
K + TNK T+K T +NKV +EV K TN T +AN + + A K
Sbjct: 516 KVANKVTNKVTNKVTYNVTNKVTNEVTNKMTNKVTNKVTNMVTYKVANKVTNKVANK 572
>SB_26157| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1097
Score = 28.3 bits (60), Expect = 6.2
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
Frame = +2
Query: 497 KTGYDEITIANFLQSLRAQK-TEPYLQITTAPKRISMDSDT 616
+ G D+ + N ++S + EPYL+I T P D DT
Sbjct: 363 RRGSDDCIVVNVVESPTGEDIVEPYLRIGTPPDEEDEDGDT 403
>SB_5916| Best HMM Match : R3H (HMM E-Value=2.9e-10)
Length = 798
Score = 28.3 bits (60), Expect = 6.2
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = +2
Query: 185 EPQKGKLIDRANERKSLDARLKEMDEAGPSNKKEEE 292
+PQ+ + +A+ ++ LD +L EM S KKE +
Sbjct: 762 KPQRADMTRKAHLQRKLDTKLDEMASGRKSKKKESK 797
>SB_47020| Best HMM Match : Profilin (HMM E-Value=1.8)
Length = 404
Score = 28.3 bits (60), Expect = 6.2
Identities = 21/78 (26%), Positives = 32/78 (41%)
Frame = +2
Query: 233 LDARLKEMDEAGPSNKKEEEPQDFXXXXXXWVPSERDISTDSEREARKARLDKYLRQYTN 412
+ +R + + GP K P DF PS++ TD + K L + Q ++
Sbjct: 227 IGSRKRALTSEGPLRSKLYRPDDFSKIIINKGPSKQKNKTDIPMQTSKNDLSP-MSQDSS 285
Query: 413 KRTSKKTLTPSNKVSEVV 466
K T K TP S+ V
Sbjct: 286 KVTKLKRSTPEPPKSKPV 303
>SB_30340| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 197
Score = 28.3 bits (60), Expect = 6.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +2
Query: 191 QKGKLIDRANERKSLDARLKEMDEAGPSNKKEEEPQD 301
Q G+L + RK+ ARLK+ D + + +PQD
Sbjct: 99 QAGRLKQEDSSRKTQAARLKQQDSSSKTQAARLKPQD 135
>SB_25304| Best HMM Match : HDV_ag (HMM E-Value=0.55)
Length = 2153
Score = 28.3 bits (60), Expect = 6.2
Identities = 15/45 (33%), Positives = 25/45 (55%)
Frame = +2
Query: 359 EREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDP 493
+R+AR+A+L+ YLR N + + TP V++ K T + P
Sbjct: 916 KRKARRAKLEMYLRMSLNTQEAHSPKTPG--VAKCPIKITEDESP 958
>SB_20306| Best HMM Match : Vicilin_N (HMM E-Value=1.8)
Length = 360
Score = 28.3 bits (60), Expect = 6.2
Identities = 16/80 (20%), Positives = 33/80 (41%)
Frame = +2
Query: 236 DARLKEMDEAGPSNKKEEEPQDFXXXXXXWVPSERDISTDSEREARKARLDKYLRQYTNK 415
D + ++ E P +K E+ P+D P E + +++ + + Q T+
Sbjct: 51 DEKPEDNPEDKPEDKTEDRPEDKPEDKLEDKPKENQQNKPEDKQQTTPKTSRKTSQKTSL 110
Query: 416 RTSKKTLTPSNKVSEVVTKP 475
S+KT ++ + T P
Sbjct: 111 NASRKTSRKTSLKRSLKTSP 130
>SB_56325| Best HMM Match : Ribosomal_L14e (HMM E-Value=0.84)
Length = 650
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 326 VPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLT-PSNKVSEVVTKPTNNNDPVKT 502
V S RD++T R+ R R++ ++ + T + T+ T PS K V PT+ +P+ T
Sbjct: 135 VSSYRDLATSRPRQ-RNRRVEGHVLRQTAENTNTGIQTPPSTKRQLRVLTPTSLENPMIT 193
Query: 503 GYD 511
D
Sbjct: 194 PRD 196
>SB_52562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1490
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/42 (33%), Positives = 22/42 (52%)
Frame = +2
Query: 335 ERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSE 460
ER DS++ + + LD+ + + TS KT TP+ K E
Sbjct: 1200 ERSSPQDSKKRSTRRSLDRKQDKNPPQTTSSKTSTPAEKPQE 1241
>SB_46952| Best HMM Match : Gemini_AL2 (HMM E-Value=1.3)
Length = 258
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/30 (46%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Frame = +2
Query: 413 KRTSK-KTLTPSNKVSEVVTKPTNNNDPVK 499
++TS+ + L P + SEVV K T +NDP K
Sbjct: 61 QQTSQPRVLEPISNSSEVVVKETGHNDPEK 90
>SB_12964| Best HMM Match : RVT_1 (HMM E-Value=5.6e-31)
Length = 1273
Score = 27.9 bits (59), Expect = 8.1
Identities = 20/63 (31%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Frame = +2
Query: 326 VPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLT-PSNKVSEVVTKPTNNNDPVKT 502
V S RD++T R+ R R++ ++ + T + T+ T PS K V PT+ +P+ T
Sbjct: 903 VSSYRDLATSRPRQ-RNRRVEGHVLRQTAENTNTGIQTPPSTKRQLRVLTPTSLENPMIT 961
Query: 503 GYD 511
D
Sbjct: 962 PRD 964
>SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 27.9 bits (59), Expect = 8.1
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 3/112 (2%)
Frame = +2
Query: 344 ISTDSEREARK-ARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVKTGYDEIT 520
+S + ++A K + DK TN +K TP+ + EV + +DP Y ++
Sbjct: 167 VSDEKVKQADKEGKQDKEAMDQTNVEAAKTVTTPTKEGDEVKEESVPRDDPEIPVY--LS 224
Query: 521 IANFLQ-SLRAQKTEPYLQITTAPKRISMDSDTTLN-FHEWFRELFRSFERV 670
+ FL+ + + PY PK D T +HE+ E + E V
Sbjct: 225 VCAFLEVESKTRSALPY------PKTHKSDPVTFFRVYHEYMTEWEPALEDV 270
>SB_12782| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 112
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 6/61 (9%)
Frame = +2
Query: 335 ERDISTDSEREARKARLDKY------LRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPV 496
E ++T S R RK L + LR+ N+RT KTL N+ E +P+ P+
Sbjct: 5 ESAVTTLSSRRHRKRLLSDHETQLLHLRRKENRRTRTKTLGAQNRDRESNPEPSATQGPI 64
Query: 497 K 499
+
Sbjct: 65 E 65
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,640,586
Number of Sequences: 59808
Number of extensions: 467905
Number of successful extensions: 1457
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1284
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1446
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1781448916
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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