Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11l08
(688 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050058-1|AAH50058.1| 703|Homo sapiens SPECC1 protein protein. 36 0.18
BC021123-1|AAH21123.2| 987|Homo sapiens sperm antigen with calp... 36 0.18
AY816327-1|AAW30000.1| 987|Homo sapiens structure protein NSP5a... 36 0.18
AY816326-1|AAW29999.1| 709|Homo sapiens structure protein NSP5a... 36 0.18
AL365181-9|CAI13053.1| 370|Homo sapiens G patch domain containi... 33 0.95
AL365181-8|CAI13052.1| 234|Homo sapiens G patch domain containi... 33 0.95
AY816329-1|AAW30002.1| 1068|Homo sapiens structure protein NSP5b... 32 1.7
AY816328-1|AAW30001.1| 790|Homo sapiens structure protein NSP5b... 31 3.8
>BC050058-1|AAH50058.1| 703|Homo sapiens SPECC1 protein protein.
Length = 703
Score = 35.5 bits (78), Expect = 0.18
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +2
Query: 281 KEEEPQDFXXXXXXWVPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSE 460
++ EP F +P+ R+ S RE R R+ + TS T TP+ +
Sbjct: 9 EDPEPGAFTTTKRTGIPAPREFSVTVSRERSVPRGPSNPRKSVSSPTSSNTPTPTKHLRT 68
Query: 461 VVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTE 562
TKP N+ + E + L +A+ +E
Sbjct: 69 PSTKPKQENEGGEKAALESQVRELLAEAKAKDSE 102
>BC021123-1|AAH21123.2| 987|Homo sapiens sperm antigen with
calponin homology and coiled-coil domains 1 protein.
Length = 987
Score = 35.5 bits (78), Expect = 0.18
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +2
Query: 281 KEEEPQDFXXXXXXWVPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSE 460
++ EP F +P+ R+ S RE R R+ + TS T TP+ +
Sbjct: 9 EDPEPGAFTTTKRTGIPAPREFSVTVSRERSVPRGPSNPRKSVSSPTSSNTPTPTKHLRT 68
Query: 461 VVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTE 562
TKP N+ + E + L +A+ +E
Sbjct: 69 PSTKPKQENEGGEKAALESQVRELLAEAKAKDSE 102
>AY816327-1|AAW30000.1| 987|Homo sapiens structure protein NSP5a3b
protein.
Length = 987
Score = 35.5 bits (78), Expect = 0.18
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +2
Query: 281 KEEEPQDFXXXXXXWVPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSE 460
++ EP F +P+ R+ S RE R R+ + TS T TP+ +
Sbjct: 9 EDPEPGAFTTTKRTGIPAPREFSVTVSRERSVPRGPSNPRKSVSSPTSSNTPTPTKHLRT 68
Query: 461 VVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTE 562
TKP N+ + E + L +A+ +E
Sbjct: 69 PSTKPKQENEGGEKAALESQVRELLAEAKAKDSE 102
>AY816326-1|AAW29999.1| 709|Homo sapiens structure protein NSP5a3a
protein.
Length = 709
Score = 35.5 bits (78), Expect = 0.18
Identities = 23/94 (24%), Positives = 38/94 (40%)
Frame = +2
Query: 281 KEEEPQDFXXXXXXWVPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSE 460
++ EP F +P+ R+ S RE R R+ + TS T TP+ +
Sbjct: 9 EDPEPGAFTTTKRTGIPAPREFSVTVSRERSVPRGPSNPRKSVSSPTSSNTPTPTKHLRT 68
Query: 461 VVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTE 562
TKP N+ + E + L +A+ +E
Sbjct: 69 PSTKPKQENEGGEKAALESQVRELLAEAKAKDSE 102
>AL365181-9|CAI13053.1| 370|Homo sapiens G patch domain containing
4 protein.
Length = 370
Score = 33.1 bits (72), Expect = 0.95
Identities = 28/107 (26%), Positives = 40/107 (37%)
Frame = +2
Query: 170 ANRKGEPQKGKLIDRANERKSLDARLKEMDEAGPSNKKEEEPQDFXXXXXXWVPSERDIS 349
A R G K KL + ++ ARLK D P + E +P E + +
Sbjct: 160 AARLGITMKAKLARLEAQEQAFLARLKGQDPGAPQLQSESKPPKKKKKKRR--QKEEEEA 217
Query: 350 TDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNND 490
T SER + ++ Q K KK KVS+ T N+
Sbjct: 218 TASERNDADEKHPEHAEQNIRKSKKKKRRHQEGKVSDEREGTTKGNE 264
>AL365181-8|CAI13052.1| 234|Homo sapiens G patch domain containing
4 protein.
Length = 234
Score = 33.1 bits (72), Expect = 0.95
Identities = 28/107 (26%), Positives = 40/107 (37%)
Frame = +2
Query: 170 ANRKGEPQKGKLIDRANERKSLDARLKEMDEAGPSNKKEEEPQDFXXXXXXWVPSERDIS 349
A R G K KL + ++ ARLK D P + E +P E + +
Sbjct: 101 AARLGITMKAKLARLEAQEQAFLARLKGQDPGAPQLQSESKPPKKKKKKRR--QKEEEEA 158
Query: 350 TDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNND 490
T SER + ++ Q K KK KVS+ T N+
Sbjct: 159 TASERNDADEKHPEHAEQNIRKSKKKKRRHQEGKVSDEREGTTKGNE 205
>AY816329-1|AAW30002.1| 1068|Homo sapiens structure protein NSP5b3b
protein.
Length = 1068
Score = 32.3 bits (70), Expect = 1.7
Identities = 20/79 (25%), Positives = 33/79 (41%)
Frame = +2
Query: 326 VPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVKTG 505
+P+ R+ S RE R R+ + TS T TP+ + TKP N+ +
Sbjct: 105 IPAPREFSVTVSRERSVPRGPSNPRKSVSSPTSSNTPTPTKHLRTPSTKPKQENEGGEKA 164
Query: 506 YDEITIANFLQSLRAQKTE 562
E + L +A+ +E
Sbjct: 165 ALESQVRELLAEAKAKDSE 183
>AY816328-1|AAW30001.1| 790|Homo sapiens structure protein NSP5b3a
protein.
Length = 790
Score = 31.1 bits (67), Expect = 3.8
Identities = 19/79 (24%), Positives = 33/79 (41%)
Frame = +2
Query: 326 VPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVKTG 505
+P+ R+ S RE R R+ + TS T TP+ + TKP N+ +
Sbjct: 105 IPAPREFSVTVSRERSVPRGPSNPRKSVSSPTSSNTPTPTKHLRTPSTKPKQENEGGEKA 164
Query: 506 YDEITIANFLQSLRAQKTE 562
E + L +++ +E
Sbjct: 165 ALESQVRELLAEAKSKDSE 183
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 100,776,774
Number of Sequences: 237096
Number of extensions: 2104910
Number of successful extensions: 5438
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5438
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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