Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11l08
(688 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g07520.1 68417.m01174 hypothetical protein contains Pfam prof... 32 0.41
At4g36520.1 68417.m05185 trichohyalin-related low similarity to ... 31 0.54
At1g45248.2 68414.m05191 hypothetical protein Since this genomic... 31 0.54
At3g12810.1 68416.m01598 SNF2 domain-containing protein / helica... 31 0.95
At5g37350.2 68418.m04487 RIO1 family protein similar to extragen... 29 2.2
At5g37350.1 68418.m04486 RIO1 family protein similar to extragen... 29 2.2
At5g28600.1 68418.m03490 hypothetical protein 29 2.9
At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp... 29 2.9
At2g36760.1 68415.m04509 UDP-glucoronosyl/UDP-glucosyl transfera... 29 2.9
At2g03060.1 68415.m00259 MADS-box family protein 29 2.9
At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyo... 29 2.9
At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyo... 29 2.9
At5g25590.1 68418.m03045 expressed protein contains Pfam profile... 29 3.8
At3g30560.1 68416.m03867 hypothetical protein 29 3.8
At1g56660.1 68414.m06516 expressed protein 29 3.8
At1g16705.1 68414.m02001 p300/CBP acetyltransferase-related prot... 29 3.8
At5g27160.1 68418.m03241 hypothetical protein contains Pfam prof... 28 5.0
At5g12220.1 68418.m01434 las1-like family protein similar to Las... 28 5.0
At3g25010.1 68416.m03126 disease resistance family protein conta... 28 5.0
At2g36790.1 68415.m04512 UDP-glucoronosyl/UDP-glucosyl transfera... 28 5.0
At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacu... 28 6.7
At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacu... 28 6.7
At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kina... 28 6.7
At3g03570.1 68416.m00360 expressed protein similar to hypothetic... 28 6.7
At5g44860.1 68418.m05499 expressed protein strong similarity to ... 27 8.8
At1g36730.1 68414.m04569 eukaryotic translation initiation facto... 27 8.8
At1g31480.1 68414.m03854 shoot gravitropism 2 (SGR2) Plant Cell ... 27 8.8
>At4g07520.1 68417.m01174 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 734
Score = 31.9 bits (69), Expect = 0.41
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 176 RKGEPQKGKLIDRANERKSLDARLKEMDEAGPSNKK 283
+KG KGK D+ NE+K D ++ DE G +K
Sbjct: 669 KKGRKGKGKCNDKKNEKKKRDEDPEDEDEGGKKKRK 704
>At4g36520.1 68417.m05185 trichohyalin-related low similarity to
SP|Q07283 Trichohyalin {Homo sapiens}
Length = 1400
Score = 31.5 bits (68), Expect = 0.54
Identities = 27/99 (27%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +2
Query: 206 IDRANERKSLDARLKEMDEAGPSNKKEE-EPQDFXXXXXXWVPSERDISTDSEREARKAR 382
+++ ER+ +AR KE +E +E+ E + ER I ERE + R
Sbjct: 732 LEQEKERRIKEAREKEENERRIKEAREKAELEQRLKATLEQEEKERQIKERQEREENERR 791
Query: 383 LDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVK 499
+ L Q N+R K+ L K +E K T + K
Sbjct: 792 AKEVLEQAENERKLKEAL--EQKENERRLKETREKEENK 828
Score = 27.5 bits (58), Expect = 8.8
Identities = 35/174 (20%), Positives = 69/174 (39%), Gaps = 6/174 (3%)
Frame = +2
Query: 185 EPQKGKLIDRANERKSLDARLKEMDEAGPSNKKEEEPQDFXXXXXXWVPS------ERDI 346
+ + + + A E+K + RLKE E + KK E + + + ER +
Sbjct: 798 QAENERKLKEALEQKENERRLKETREKEENKKKLREAIELEEKEKRLIEAFERAEIERRL 857
Query: 347 STDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVKTGYDEITIA 526
D E+E + RL + + R +++ K E + ++ + ++ T
Sbjct: 858 KEDLEQEEMRMRLQEAKERERLHRENQEHQENERKQHEYSGEESDEKERDACEMEK-TCE 916
Query: 527 NFLQSLRAQKTEPYLQITTAPKRISMDSDTTLNFHEWFRELFRSFERVKCETAP 688
++ Q + L T + S+D+D ++N + E R E + ET P
Sbjct: 917 TTKEAHGEQSSNESLS-DTLEENESIDNDVSVNKQKKEEEGTRQRESMSAETCP 969
>At1g45248.2 68414.m05191 hypothetical protein Since this genomic
sequence region is unfinished, the annotated gene may be
missing a stop codon or start codon
Length = 185
Score = 31.5 bits (68), Expect = 0.54
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = +3
Query: 294 PKTSHQALPRGCRVNETYLQIRKGKPEKLGWINIYGNILTSE 419
P S + P R T Q+RK + +K G++N+Y ++T+E
Sbjct: 65 PLKSKRNKPTDWRPRNTKKQLRKNQKKKSGFLNLYALLITNE 106
>At3g12810.1 68416.m01598 SNF2 domain-containing protein / helicase
domain-containing protein similar to transcriptional
activator SRCAP [Homo sapiens] GI:5106572; contains Pfam
profiles PF00271: Helicase conserved C-terminal domain,
PF00176: SNF2 family N-terminal domain
Length = 2055
Score = 30.7 bits (66), Expect = 0.95
Identities = 24/117 (20%), Positives = 50/117 (42%), Gaps = 4/117 (3%)
Frame = +2
Query: 161 LITANRKGEPQKGKLID-RANERKSLDARLKEMDEAGPSNKKEEEPQD---FXXXXXXWV 328
L+T K + ++ + I N L++ E+DE ++E D +
Sbjct: 177 LLTIESKSDEERAEQIPPEINSSAGLESGSPELDEDYDLKSEDETEDDEDTIEEDEKHFT 236
Query: 329 PSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVK 499
ER ++ + +++ LR+YT+ R S++T ++ + +T + PVK
Sbjct: 237 KRERQEELEALQNEVDLPVEELLRRYTSGRVSRETSPVKDENEDNLTSVSRVTSPVK 293
>At5g37350.2 68418.m04487 RIO1 family protein similar to extragenic
suppressor of the bimD6 mutation (SUDD) [Emericella
nidulans] GI:2338556, RIO1 [Saccharomyces cerevisiae]
GI:1359602; contains Pfam profile PF01163: RIO1 family
Length = 385
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 278 KKEEEPQDFXXXXXXWVPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSN--K 451
++EEE ++ SE+++ + ++ ARK K + KR S+KT TP + K
Sbjct: 317 EEEEEEEEEGSGEESEEESEKELGPEDKKAARKEHKKKVKEE---KRESRKTKTPKSVKK 373
Query: 452 VSEVVTKP 475
+ V+KP
Sbjct: 374 RKKKVSKP 381
>At5g37350.1 68418.m04486 RIO1 family protein similar to extragenic
suppressor of the bimD6 mutation (SUDD) [Emericella
nidulans] GI:2338556, RIO1 [Saccharomyces cerevisiae]
GI:1359602; contains Pfam profile PF01163: RIO1 family
Length = 531
Score = 29.5 bits (63), Expect = 2.2
Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)
Frame = +2
Query: 278 KKEEEPQDFXXXXXXWVPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSN--K 451
++EEE ++ SE+++ + ++ ARK K + KR S+KT TP + K
Sbjct: 463 EEEEEEEEEGSGEESEEESEKELGPEDKKAARKEHKKKVKEE---KRESRKTKTPKSVKK 519
Query: 452 VSEVVTKP 475
+ V+KP
Sbjct: 520 RKKKVSKP 527
>At5g28600.1 68418.m03490 hypothetical protein
Length = 711
Score = 29.1 bits (62), Expect = 2.9
Identities = 18/63 (28%), Positives = 31/63 (49%)
Frame = +2
Query: 452 VSEVVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTEPYLQITTAPKRISMDSDTTLNFH 631
V+EVVT P ++ D +T D +AN L+ + + + T+PK ++ + F
Sbjct: 473 VTEVVTSPKHSGDNEETTTDMDPLANDLEGSKRPEIISATEAGTSPKHSIVNEEGVSVFG 532
Query: 632 EWF 640
E F
Sbjct: 533 EDF 535
>At5g23080.1 68418.m02698 SWAP (Suppressor-of-White-APricot)/surp
domain-containing protein contains Pfam domain PF01805:
Surp module
Length = 930
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/74 (29%), Positives = 36/74 (48%)
Frame = +2
Query: 347 STDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVKTGYDEITIA 526
S+D+ REARKA +L YT++ T + TP + VSE + + D + + +
Sbjct: 184 SSDARREARKA----FLAFYTDENTKE---TPDSLVSETEVETSLGEDIKISESTPVYVL 236
Query: 527 NFLQSLRAQKTEPY 568
N Q L +P+
Sbjct: 237 NPKQDLHGLGYDPF 250
>At2g36760.1 68415.m04509 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 496
Score = 29.1 bits (62), Expect = 2.9
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 4/56 (7%)
Frame = +2
Query: 137 VQELKVGVLITAN---RKGEPQK-GKLIDRANERKSLDARLKEMDEAGPSNKKEEE 292
VQ LK GV + + GE + G L+D+ +K++D + E DEA K+ E
Sbjct: 407 VQVLKAGVSVGVEEVMKWGEEESIGVLVDKEGVKKAVDEIMGESDEAKERRKRVRE 462
>At2g03060.1 68415.m00259 MADS-box family protein
Length = 337
Score = 29.1 bits (62), Expect = 2.9
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 6/78 (7%)
Frame = +2
Query: 389 KYLRQYTNKRTSKKTLTPSNKVSEVV------TKPTNNNDPVKTGYDEITIANFLQSLRA 550
KY R Y+ K S + ++SE+ T+P N+ G EI+I L LRA
Sbjct: 83 KYTRIYSLKDLSTQARILQARISEIHGRLSYWTEPDKINNVEHLGQLEISIRQSLDQLRA 142
Query: 551 QKTEPYLQITTAPKRISM 604
K + +QI + SM
Sbjct: 143 HKMQDGIQIPLEQQLQSM 160
>At1g17140.2 68414.m02089 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 149 KVGVLITANRKGEPQKGKLIDRANERKSLDARLKEMDEAGPSNKKEEE 292
K+ V R G + KL+ + +E K L ARL +M++ S KE E
Sbjct: 147 KIAVEEEELRSGNDEAEKLVAKEDEIKMLKARLYDMEKEHESLGKENE 194
>At1g17140.1 68414.m02088 tropomyosin-related similar to Tropomyosin
1. [Baker's yeast](SP:P17536) {Saccharomyces cerevisiae}
Length = 344
Score = 29.1 bits (62), Expect = 2.9
Identities = 17/48 (35%), Positives = 25/48 (52%)
Frame = +2
Query: 149 KVGVLITANRKGEPQKGKLIDRANERKSLDARLKEMDEAGPSNKKEEE 292
K+ V R G + KL+ + +E K L ARL +M++ S KE E
Sbjct: 147 KIAVEEEELRSGNDEAEKLVAKEDEIKMLKARLYDMEKEHESLGKENE 194
>At5g25590.1 68418.m03045 expressed protein contains Pfam profile
PF04783: Protein of unknown function (DUF630)
Length = 775
Score = 28.7 bits (61), Expect = 3.8
Identities = 15/50 (30%), Positives = 26/50 (52%)
Frame = +2
Query: 128 EPNVQELKVGVLITANRKGEPQKGKLIDRANERKSLDARLKEMDEAGPSN 277
E +E+K TA + EP+ + + ++N RK L+ E+ A P+N
Sbjct: 145 EEEEEEVKGSGRDTAQEEEEPRTPENVGKSNGRKRLEKTTPEIVSASPAN 194
>At3g30560.1 68416.m03867 hypothetical protein
Length = 1473
Score = 28.7 bits (61), Expect = 3.8
Identities = 19/82 (23%), Positives = 32/82 (39%)
Frame = +2
Query: 389 KYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTEPY 568
KYL +Y NK + T++ EVV++ N + ++ + ++ E
Sbjct: 699 KYLFKYVNKGPDRVTVSLEPHRKEVVSEENNVGETNNDPQEQNQVEDYFDCRYVSACEAM 758
Query: 569 LQITTAPKRISMDSDTTLNFHE 634
+I P T L FHE
Sbjct: 759 WRIKGYPIHYRQTLVTKLTFHE 780
>At1g56660.1 68414.m06516 expressed protein
Length = 522
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/112 (20%), Positives = 48/112 (42%)
Frame = +2
Query: 125 LEPNVQELKVGVLITANRKGEPQKGKLIDRANERKSLDARLKEMDEAGPSNKKEEEPQDF 304
LE ++KV ++KG+ +K + ++ E K + KE DE+GP K ++ ++
Sbjct: 99 LEVKESDVKVEEHEKEHKKGKEKKHEELEEEKEGKKKKNK-KEKDESGPEEKNKKADKEK 157
Query: 305 XXXXXXWVPSERDISTDSEREARKARLDKYLRQYTNKRTSKKTLTPSNKVSE 460
E + D ++ +K + + + K +K +K +E
Sbjct: 158 KHEDVSQEKEELE-EEDGKKNKKKEKDESGTEEKKKKPKKEKKQKEESKSNE 208
>At1g16705.1 68414.m02001 p300/CBP acetyltransferase-related
protein-related similar to p300/CBP
acetyltransferase-related protein 2 [Arabidopsis
thaliana] GI:12597461
Length = 128
Score = 28.7 bits (61), Expect = 3.8
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +2
Query: 380 RLDKYLRQYTNKRTSKKTLTPSNKVSEVVTKPTNNNDPVKT 502
+L+KY Q+ + T T+TP+ VS T N D +T
Sbjct: 75 QLNKYKHQHADSSTLGTTITPTPGVSAEPTMDNENRDQCET 115
>At5g27160.1 68418.m03241 hypothetical protein contains Pfam profile
PF03384: Drosophila protein of unknown function, DUF287
Length = 702
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 176 RKGEPQKGKLIDRANERKSLDARLKEMDEAGPSNKKEEEPQDF 304
+KG KGK D+ N +K D ++ DE G K++ P F
Sbjct: 644 KKGRKGKGKCNDKKNAKKKRDEDPEDEDE-GVKKKRKINPSRF 685
>At5g12220.1 68418.m01434 las1-like family protein similar to Las1p
[Saccharomyces cerevisiae] GI:495504; contains Pfam
profile PF04031: Las1-like
Length = 611
Score = 28.3 bits (60), Expect = 5.0
Identities = 22/82 (26%), Positives = 37/82 (45%), Gaps = 1/82 (1%)
Frame = +2
Query: 233 LDARLKEMDEAGPSNKKEEEPQDFXXXXXXWVPSERDISTDSEREARKARLDKYLRQ-YT 409
L+ LK +D + ++ + + QDF W P ++S + E E L + L
Sbjct: 257 LEFLLKALDSSKSTDLQNKAGQDFRVFLDEWKPVIMELS-NREPELLLTLLKEVLDMIQN 315
Query: 410 NKRTSKKTLTPSNKVSEVVTKP 475
N+R +T P +VS+V P
Sbjct: 316 NERRRHETEKPVEEVSQVEQVP 337
>At3g25010.1 68416.m03126 disease resistance family protein contains
leucine rich-repeat (LRR) domains (23 copies)
Pfam:PF00560, INTERPRO:IPR001611; similar to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596
Length = 881
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -2
Query: 498 LTGSL---LFVGFVTTSLTLFEGVNVFLLVRLLVYCRKYLSNLA 376
LTGSL FV + +SLT+ E ++++ +VY YLS LA
Sbjct: 640 LTGSLPQDFFVNWKASSLTMNEDQGLYMVYSKVVYGIYYLSYLA 683
>At2g36790.1 68415.m04512 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 495
Score = 28.3 bits (60), Expect = 5.0
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 4/56 (7%)
Frame = +2
Query: 137 VQELKVGVLITAN---RKGEPQK-GKLIDRANERKSLDARLKEMDEAGPSNKKEEE 292
VQ LKVGV + GE +K G L+D+ +K+++ + E D+A ++ +E
Sbjct: 406 VQILKVGVSAEVKEVMKWGEEEKIGVLVDKEGVKKAVEELMGESDDAKERRRRAKE 461
>At5g08450.2 68418.m00996 expressed protein KED, Nicotiana tabacum,
EMBL:AB009883
Length = 918
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +2
Query: 179 KGEPQKGKLIDRANERKSL---DARLKEMDEAGPSNKKEEEPQDFXXXXXXWVPSERDIS 349
K EP+ G + + K L A+ E + P KK+ EP + R+
Sbjct: 426 KREPRTGAEKEISQNEKELGEASAKPSEQEYVAPEQKKQNEPDNCEKDERETKEKRRERD 485
Query: 350 TDSEREARKAR 382
DSE E + R
Sbjct: 486 GDSEAERAEKR 496
>At5g08450.1 68418.m00995 expressed protein KED, Nicotiana tabacum,
EMBL:AB009883
Length = 918
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/71 (26%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +2
Query: 179 KGEPQKGKLIDRANERKSL---DARLKEMDEAGPSNKKEEEPQDFXXXXXXWVPSERDIS 349
K EP+ G + + K L A+ E + P KK+ EP + R+
Sbjct: 426 KREPRTGAEKEISQNEKELGEASAKPSEQEYVAPEQKKQNEPDNCEKDERETKEKRRERD 485
Query: 350 TDSEREARKAR 382
DSE E + R
Sbjct: 486 GDSEAERAEKR 496
>At4g33240.1 68417.m04731 phosphatidylinositol-4-phosphate 5-kinase
family protein similar to SP|Q9Z1T6 FYVE
finger-containing phosphoinositide kinase (EC 2.7.1.68)
(1- phosphatidylinositol-4-phosphate kinase) (PIP5K)
(PtdIns(4)P-5-kinase) {Mus musculus}; contains Pfam
profiles PF01504: Phosphatidylinositol-4-phosphate
5-Kinase, PF01363: FYVE zinc finger, PF00118: TCP-1/cpn60
chaperonin family
Length = 1756
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/28 (53%), Positives = 21/28 (75%), Gaps = 1/28 (3%)
Frame = -2
Query: 384 NLAFLASLSE-SVDMSRSLGTHEEELDE 304
NL L SLS+ SVDMSRSL + +E++ +
Sbjct: 1402 NLLSLNSLSDLSVDMSRSLSSADEQVSQ 1429
>At3g03570.1 68416.m00360 expressed protein similar to hypothetical
protein GB:CAB38918 [Arabidopsis thaliana]
Length = 607
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/64 (25%), Positives = 32/64 (50%)
Frame = +2
Query: 434 LTPSNKVSEVVTKPTNNNDPVKTGYDEITIANFLQSLRAQKTEPYLQITTAPKRISMDSD 613
L+ S K+ ++ + P + T +E + +F Q+TEP LQIT + + + S+
Sbjct: 327 LSASGKIGQISSSPLSARSA--TSVEENILRDFESHTIKQETEPSLQITPSGQSLRQISE 384
Query: 614 TTLN 625
++
Sbjct: 385 DAVS 388
>At5g44860.1 68418.m05499 expressed protein strong similarity to
unknown protein (gb AAC79135.1)
Length = 321
Score = 27.5 bits (58), Expect = 8.8
Identities = 30/118 (25%), Positives = 54/118 (45%), Gaps = 8/118 (6%)
Frame = -2
Query: 651 KSSLNHSWKLRVVSLSILILF--------GAVVIWRYGSVFWARNDCRKFAIVISS*PVL 496
+S NH W L ++ I ++F A V++ S++ + F+ +S+ P++
Sbjct: 68 QSKTNHEWTLLLIYQFIYVIFLFAFSLLSTAAVVFTVASLYTGKP--VSFSSTMSAIPLV 125
Query: 495 TGSLLFVGFVTTSLTLFEGVNVFLLVRLLVYCRKYLSNLAFLASLSESVDMSRSLGTH 322
LF+ F+ SL + +VFLL +++ L ++ LA S V LG H
Sbjct: 126 L-KRLFITFLWVSLMMLVYNSVFLLFLVVLIVAIDLQSV-ILAVFSMVVIFVLFLGVH 181
>At1g36730.1 68414.m04569 eukaryotic translation initiation factor
5, putative / eIF-5, putative similar to SP|P55876
Eukaryotic translation initiation factor 5 (eIF-5) {Zea
mays}; contains Pfam profiles PF02020:
eIF4-gamma/eIF5/eIF2-epsilon, PF01873: Domain found in
IF2B/IF5
Length = 439
Score = 27.5 bits (58), Expect = 8.8
Identities = 29/114 (25%), Positives = 44/114 (38%), Gaps = 9/114 (7%)
Frame = +2
Query: 272 SNKKEEEPQDFXXXXXXWVPSERDIS-----TDSEREARKARLDKYLRQYTNKRTSKKTL 436
S KK+ P SE D TD+ REA + R+ + L T + T+
Sbjct: 201 SKKKDHSPPRSLSDENDQADSEEDDDDVQWQTDTSREAAEKRMKEQLSAVTAEMVMLSTV 260
Query: 437 TPSNKVSEVVTKP----TNNNDPVKTGYDEITIANFLQSLRAQKTEPYLQITTA 586
V+EV P N N + E + N ++ L + + P Q+ TA
Sbjct: 261 EEKKPVAEVKKAPEQVHENGNSKIPENAHE-KLVNEIKELLSSGSSP-TQLKTA 312
>At1g31480.1 68414.m03854 shoot gravitropism 2 (SGR2) Plant Cell
2002 Jan;14:33-46 PMID:11826297; similar to
phospholipase [Homo sapiens] GI:4760647; identical to
cDNA PF02862: DDHD domain
Length = 933
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/29 (41%), Positives = 19/29 (65%)
Frame = +3
Query: 330 RVNETYLQIRKGKPEKLGWINIYGNILTS 416
++N YL+ K P+ +G I+IYG+ L S
Sbjct: 419 QLNRLYLKFLKRNPDYVGKISIYGHSLGS 447
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,098,429
Number of Sequences: 28952
Number of extensions: 319769
Number of successful extensions: 1017
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 991
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1017
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1457719448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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