Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11l07
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           23   2.0  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    23   2.6  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   3.5  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.0  

>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 17/58 (29%), Positives = 26/58 (44%)
 Frame = +1

Query: 436 PYLQVIIDDKILRKTEVIRNTLHPKWKEDLTILVTPQSQLLFRLADYHSFRKDNVIGE 609
           PY  + +DD IL    ++   L  K  +DL++L    S L   +    S   D V G+
Sbjct: 157 PYEALNVDDHILSDPSLMDADLEFKGAQDLSLLHVSDS-LSPGIYSEQSLSPDTVFGD 213


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 23.0 bits (47), Expect = 2.6
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 755 EATPVLLFLPQHFH*YSLEKMF 690
           E   V +FLP  FH Y+ E +F
Sbjct: 486 EKPDVKIFLPFRFHIYTPEDLF 507


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 14/28 (50%), Positives = 15/28 (53%)
 Frame = -2

Query: 286 IILFYLGCGFILILDISYEASSSEAKNP 203
           IILFYL    IL+    Y AS  E  NP
Sbjct: 325 IILFYLSVFVILV----YYASLDETPNP 348


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 84   VYVYLCAFC 110
            VY++LC FC
Sbjct: 1132 VYLFLCGFC 1140


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,035
Number of Sequences: 336
Number of extensions: 3960
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)