Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11l07
         (755 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           26   1.1  
AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcript...    25   3.3  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    24   5.8  

>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 26.2 bits (55), Expect = 1.1
 Identities = 9/55 (16%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
 Frame = +1

Query: 430 PNPYLQVIIDDKILR-KTEVIRNTLHPKWKEDLTILVTPQSQLLFRLADYHSFRK 591
           P+P+ +++++       TE+ + +L P+W     + +     +L  + ++    K
Sbjct: 24  PDPFAKILVEGTTQEYTTEICKASLDPRWNSHYDLFLGKNDSILITIYNHRKMPK 78


>AB090817-2|BAC57910.1| 1009|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1009

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 9/22 (40%), Positives = 14/22 (63%)
 Frame = -1

Query: 164 GNVNNATFSLSHYLLKSSAEGT 99
           G  NNA+F + ++  K  AEG+
Sbjct: 335 GTANNASFGIVYHTFKKVAEGS 356


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.8 bits (49), Expect = 5.8
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -2

Query: 265 CGFILILDISYEASSSEAKNPSN 197
           CG  LIL+ +Y   SS  K+P++
Sbjct: 257 CGARLILNSNYTRKSSSKKDPTS 279


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 714,419
Number of Sequences: 2352
Number of extensions: 13276
Number of successful extensions: 22
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)