Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11l03
         (419 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-2848|AAF48961.1|   74|Drosophila melanogaster CG14199-P...   104   4e-23
AJ277174-1|CAB85469.1|  473|Drosophila melanogaster mod(mdg4)51....    30   1.4  
AE014297-2986|AAN13867.1|  473|Drosophila melanogaster CG32491-P...    30   1.4  
BT025895-1|ABG02139.1|  114|Drosophila melanogaster IP03267p pro...    28   5.8  

>AE014298-2848|AAF48961.1|   74|Drosophila melanogaster CG14199-PA
           protein.
          Length = 74

 Score =  104 bits (250), Expect = 4e-23
 Identities = 44/69 (63%), Positives = 53/69 (76%)
 Frame = +2

Query: 137 SAIFNFQXXXXXXXXXICTCAYLRSFFPSIMDRNKTGLLGTFWKCARIGERKSPYVAVCC 316
           SA+FNF          ICTCAYLRS FPS++DRNKTG +GTFWK ARIGERKSP+V   C
Sbjct: 4   SALFNFHSLLSVILLLICTCAYLRSLFPSLIDRNKTGFMGTFWKLARIGERKSPWVGAAC 63

Query: 317 ILMAFSILF 343
           ++MAF++LF
Sbjct: 64  LIMAFTVLF 72


>AJ277174-1|CAB85469.1|  473|Drosophila melanogaster mod(mdg4)51.4
           protein.
          Length = 473

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +2

Query: 233 RNKTGLLGTFWKCARIGERK 292
           RNKT  L T+W CAR G  K
Sbjct: 429 RNKTSGLKTYWSCARAGVHK 448


>AE014297-2986|AAN13867.1|  473|Drosophila melanogaster CG32491-PJ,
           isoform J protein.
          Length = 473

 Score = 29.9 bits (64), Expect = 1.4
 Identities = 12/20 (60%), Positives = 13/20 (65%)
 Frame = +2

Query: 233 RNKTGLLGTFWKCARIGERK 292
           RNKT  L T+W CAR G  K
Sbjct: 429 RNKTSGLKTYWSCARAGVHK 448


>BT025895-1|ABG02139.1|  114|Drosophila melanogaster IP03267p
           protein.
          Length = 114

 Score = 27.9 bits (59), Expect = 5.8
 Identities = 16/58 (27%), Positives = 29/58 (50%)
 Frame = +1

Query: 157 KPFIRITIVDMHLRLSKIIFSKYHGPE*NWFTGNILEMCKNW*TQIPLCCSLLYINGL 330
           +P +     D+HL L  +   +   P+ +   G++LE  K+W  Q+ +  S L  +GL
Sbjct: 34  QPAVGHPAADLHLCLPALALPQLDRPQQDRIHGHLLEAGKDWGAQVAVGRSRLPDHGL 91


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,637,502
Number of Sequences: 53049
Number of extensions: 288136
Number of successful extensions: 355
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 355
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1271883306
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)