Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11l01
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory recept...    25   0.50 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          24   1.1  
DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory pro...    22   4.6  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   6.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   6.1  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   6.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   8.1  

>AM292363-1|CAL23175.2|  347|Tribolium castaneum gustatory receptor
           candidate 42 protein.
          Length = 347

 Score = 25.4 bits (53), Expect = 0.50
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -3

Query: 479 KIYMLCTTAGSIKPSSLQMLFTR 411
           KIY LC     + PS+L +++ R
Sbjct: 29  KIYALCVVTALVTPSALSIIYYR 51


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 24.2 bits (50), Expect = 1.1
 Identities = 12/36 (33%), Positives = 15/36 (41%)
 Frame = -2

Query: 615 RQPQTAVLNCGFFKSYPEANWGSWLCVQICCVLMWN 508
           RQ  T   N    + Y    W +W+ V   CV  WN
Sbjct: 455 RQRGTLEGNNMGIQPYDSLLWHTWMPVMRICVSAWN 490


>DQ855490-1|ABH88177.1|  133|Tribolium castaneum chemosensory
           protein 4 protein.
          Length = 133

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +1

Query: 76  HDSIKSQLITDGYAILEDFLH-VAECDEIKAAGLEFTENLPDIEERATFSTTEK 234
           +D+I  + +     +L+ ++  + E       GLE  +N+PD  E      +EK
Sbjct: 30  YDNIDLENVVKNERLLKSYVDCLLEKGRCSPDGLELKKNMPDAIETDCSKCSEK 83


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/16 (43%), Positives = 12/16 (75%)
 Frame = +1

Query: 649 LIRNPDEDSDEALIYD 696
           ++R P+ED+  A +YD
Sbjct: 194 IVRVPEEDNPHAKLYD 209


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = +2

Query: 362 THCISYIRFSDVTRIVNA*RAFAKSLA 442
           TH +SYI  +   +IVN    F ++ A
Sbjct: 379 THILSYINKASFKKIVNTVATFDETWA 405


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = +3

Query: 303 HRRRWKSYSRTGDFI 347
           H   WKSY RT  FI
Sbjct: 120 HMLIWKSYKRTQIFI 134


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 8.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +1

Query: 490 GIGSEVVPHQDATYLYTE 543
           G+G  VVP  DAT  Y +
Sbjct: 462 GLGRAVVPTLDATSYYAK 479


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,763
Number of Sequences: 336
Number of extensions: 3936
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)