Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11l01
(760 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110479-7|CAB54355.1| 288|Caenorhabditis elegans Hypothetical ... 175 2e-44
Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z82282-7|CAB05280.2| 584|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z82053-3|CAB04837.2| 240|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 29 4.7
Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z73969-15|CAA98238.1| 546|Caenorhabditis elegans Hypothetical p... 28 6.3
AF072380-1|AAC62467.1| 546|Caenorhabditis elegans Akt/PKB serin... 28 6.3
AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine re... 28 6.3
Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical p... 28 8.3
Z92804-3|CAB07250.1| 492|Caenorhabditis elegans Hypothetical pr... 28 8.3
AL023821-2|CAA19437.2| 355|Caenorhabditis elegans Hypothetical ... 28 8.3
>AL110479-7|CAB54355.1| 288|Caenorhabditis elegans Hypothetical
protein Y105C5B.9 protein.
Length = 288
Score = 175 bits (427), Expect = 2e-44
Identities = 91/229 (39%), Positives = 132/229 (57%), Gaps = 5/229 (2%)
Frame = +1
Query: 85 IKSQLITDGYAILEDFLHVAECDEIKAAGLEFTENLPDIEE-RATFST-TEKTHLKDKYF 258
++ + DG+ ++E+ + E DE+K + + ++ E ++ FST E H D YF
Sbjct: 4 LREKFERDGFVVVENVFNDQEIDEMKKSISKIVNDMDLAEHPKSVFSTYDEDKHAADSYF 63
Query: 259 LESNDKIRCFFEEGAIDADGNLTVEPEISLNKVGHALHLLHPIFRCYTYSERVKSICKEL 438
L S+DKIR FFEEGA+D DG LTV + +LNK+GH LH L P F T++ ++++I KE+
Sbjct: 64 LNSSDKIRFFFEEGAVDKDGELTVPKDKALNKIGHGLHFLDPTFEKMTFNSKIQNIFKEI 123
Query: 439 GFIEPAVVQSMYIFKNPGIGSEVVPHQDATYLYTEPTPPV-GFWIALEEATVQNGCLWL- 612
G+ EP VVQSMYIFK P IG V H D+T+L +P + G WIA++EA+V+NGCL
Sbjct: 124 GYQEPGVVQSMYIFKQPKIGGAVTDHVDSTFLRVDPIDHLTGVWIAIDEASVENGCLSFI 183
Query: 613 -XXXXXXXXXXXXLIRNPDEDSDEALIYDKPAAVYPQSSFTPIPVSKGT 756
+R D L + Y QS F +P+SKG+
Sbjct: 184 PGSHKDTSSANYRFVRTHDTSGGALLKFIGTRPTYDQSKFQHVPISKGS 232
>Z82287-5|CAB05315.1| 328|Caenorhabditis elegans Hypothetical
protein ZK550.5 protein.
Length = 328
Score = 32.3 bits (70), Expect = 0.38
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Frame = +1
Query: 382 PIFRCYTYSERVKSICKEL-GFIEPAV--VQSMYIFKNPGIG---SEVVPHQDATYLYTE 543
P+ Y +++V + ++L G + + + +M I K P G S HQD Y
Sbjct: 108 PVLFSYCENKKVTDVVRDLIGSPDTRITAMHTMLINKPPDTGALTSRHPMHQDLIYFPWR 167
Query: 544 PTP-PVGFWIALEEATVQNGCL 606
P V W A+E+ QNGCL
Sbjct: 168 PEELTVCAWTAMEKINKQNGCL 189
>Z82282-7|CAB05280.2| 584|Caenorhabditis elegans Hypothetical
protein T07G12.10 protein.
Length = 584
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = +1
Query: 109 GYAILEDFLHV--AECDEIKAAGLEFTENLPDIEERATFSTTEKTHLKDKYFLESNDK 276
GY +L+D + A C+E++ + EN+P + TFS T + Y N K
Sbjct: 199 GYEVLDDSNKILTANCEEVE---MSLCENIPGVNNARTFSNTPYDDFLNIYSTPKNPK 253
>Z82053-3|CAB04837.2| 240|Caenorhabditis elegans Hypothetical
protein T26E3.4 protein.
Length = 240
Score = 29.1 bits (62), Expect = 3.6
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +1
Query: 169 GLEFTENLPDIEERATFSTTEKTHLKDKYFLESNDKIRCFFEE 297
G+EFTEN PD T + E ++ ES DK+R EE
Sbjct: 57 GIEFTENYPDEIPIITLNGIEDAFTAER-IAESIDKLRSVAEE 98
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = -1
Query: 700 VYHRLKPRHCLHLGCGSNVC 641
V HR K RHC + GCG +VC
Sbjct: 27 VVHRFK-RHCGYNGCGRSVC 45
>Z98877-2|CAB11570.1| 907|Caenorhabditis elegans Hypothetical
protein Y69H2.2 protein.
Length = 907
Score = 28.3 bits (60), Expect = 6.3
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 584 PQFKTAVCGCLEALTGQECTDV 649
P+FK C CL LTG C+++
Sbjct: 478 PKFKGYDCTCLTGLTGANCSEI 499
>Z73969-15|CAA98238.1| 546|Caenorhabditis elegans Hypothetical
protein C12D8.10b protein.
Length = 546
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 250 KYFLESNDKIRCFFEEGAIDADGNLTVEPEISLNKVG 360
KY ++ND++ CF E AI D + E+ +NK G
Sbjct: 257 KYSFQTNDRL-CFVMEFAIGGDLYYHLNREVQMNKEG 292
>AF072380-1|AAC62467.1| 546|Caenorhabditis elegans Akt/PKB
serine/threonine kinase protein.
Length = 546
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 250 KYFLESNDKIRCFFEEGAIDADGNLTVEPEISLNKVG 360
KY ++ND++ CF E AI D + E+ +NK G
Sbjct: 257 KYSFQTNDRL-CFVMEFAIGGDLYYHLNREVQMNKEG 292
>AC024806-3|AAP13749.1| 363|Caenorhabditis elegans Serpentine
receptor, class w protein40 protein.
Length = 363
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +1
Query: 40 SFCFCKFIASIMHDSIKSQLITDGYAILEDFLHVAECDEIK 162
+ CF F A+I+H I SQ ++ F+ +A CD I+
Sbjct: 43 TICFVGFFANIVHLIILSQKSMRNLSVNVFFIGIAICDTIR 83
>Z98877-11|CAB63408.1| 887|Caenorhabditis elegans Hypothetical
protein Y69H2.11 protein.
Length = 887
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +2
Query: 581 KPQFKTAVCGCLEALTGQECTDV 649
KP+FK C C+ LTG C+ +
Sbjct: 431 KPKFKGYDCTCITGLTGVNCSTI 453
>Z92804-3|CAB07250.1| 492|Caenorhabditis elegans Hypothetical
protein K05D4.4 protein.
Length = 492
Score = 27.9 bits (59), Expect = 8.3
Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Frame = +1
Query: 88 KSQLITDGYAILEDFLHVAECDEIKAAGLEFTENLPDIEE-RATFSTTEK 234
K Q + +G A +E FL A L+F+ NLPD+++ + F T K
Sbjct: 433 KRQCLGEGLARMELFLFFANIFNRYDVQLDFSGNLPDLDKSKDNFVTPRK 482
>AL023821-2|CAA19437.2| 355|Caenorhabditis elegans Hypothetical
protein Y102A5B.3 protein.
Length = 355
Score = 27.9 bits (59), Expect = 8.3
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 5/95 (5%)
Frame = -2
Query: 678 VTVFIWVADQTSVHS*PVRASRQPQTAVLNCGFF-KSYPEA-NWGSWLCVQ---ICCVLM 514
++ IW S S AS P + +CG+F + EA W + LC Q I C L
Sbjct: 168 ISTCIWDIVSGSAESYDNFASGYPNVSTASCGYFITTGKEAGQWKTGLCNQQNSILCELP 227
Query: 513 WNHFGTNARVLKNIHALHHSRLDKAKLFANALHAF 409
+ N KN + ++R D A A A H F
Sbjct: 228 PTIYDKNCE--KNFNNHCYTRFDDAYTVAEA-HEF 259
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,871,943
Number of Sequences: 27780
Number of extensions: 378727
Number of successful extensions: 1108
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1105
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -