Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11k23
         (478 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6FLI7 Cluster: Similar to sp|P36125 Saccharomyces cere...    35   0.81 
UniRef50_A7TFE9 Cluster: Putative uncharacterized protein; n=1; ...    34   1.4  
UniRef50_UPI00006CB5AF Cluster: Leucine Rich Repeat family prote...    34   1.9  
UniRef50_Q4UMJ8 Cluster: Site-specific recombinases; n=3; Ricket...    32   5.7  

>UniRef50_Q6FLI7 Cluster: Similar to sp|P36125 Saccharomyces
           cerevisiae YKR030w; n=1; Candida glabrata|Rep: Similar
           to sp|P36125 Saccharomyces cerevisiae YKR030w - Candida
           glabrata (Yeast) (Torulopsis glabrata)
          Length = 251

 Score = 35.1 bits (77), Expect = 0.81
 Identities = 24/94 (25%), Positives = 45/94 (47%), Gaps = 6/94 (6%)
 Frame = +2

Query: 89  FQRASVVTQYSDSPNVFVLTCVLIT----YMQDFFFKFPVILCVQF*INLLFIH-LLGGV 253
           +QR +      D P+ F+L  +LI+    +   F++   +  C+Q   NL+F+H  L G 
Sbjct: 68  YQRQTKNQWARDDPSFFILEILLISISSVFWSLFYYNHSLWKCLQSIFNLIFVHFFLFGF 127

Query: 254 GTANFSLLLFSISR-QLNTHSSLSLSLIFTHSIH 352
            TA F  +  +  R +  + SS ++   +   +H
Sbjct: 128 ATATFFWITLNQPRFKFKSASSSNIEWAYCFDVH 161


>UniRef50_A7TFE9 Cluster: Putative uncharacterized protein; n=1;
           Vanderwaltozyma polyspora DSM 70294|Rep: Putative
           uncharacterized protein - Vanderwaltozyma polyspora DSM
           70294
          Length = 785

 Score = 34.3 bits (75), Expect = 1.4
 Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
 Frame = -1

Query: 328 RERERGVSVELTADRK**KRKISCADPT**VNKKKIDLKLYTQNNWKFKKKILHICNKHT 149
           +E   G+ VE T  +K     I+C       N ++IDL+L +Q   KFK  +L    K T
Sbjct: 104 QEESGGIQVESTVVQKL-SNLITCG------NYQEIDLELLSQLPLKFKSTVLKDYVKQT 156

Query: 148 S--*NKNIRTVAVLSHNTRSLKDL 83
           +   N  +RT +++ H  R LK +
Sbjct: 157 NGVGNNVLRTASIMEHMERQLKKI 180


>UniRef50_UPI00006CB5AF Cluster: Leucine Rich Repeat family protein;
           n=1; Tetrahymena thermophila SB210|Rep: Leucine Rich
           Repeat family protein - Tetrahymena thermophila SB210
          Length = 2323

 Score = 33.9 bits (74), Expect = 1.9
 Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
 Frame = -1

Query: 229 KKIDLKLYTQNNWKFKKKILHICNKHTS*NKN-IRTVAVLSHNTRSLKDLIISYKN 65
           KKIDL     +N KFK+  +++  K    + N I  ++ +S + ++L+DL ISY N
Sbjct: 392 KKIDLNRNQLSNIKFKENEIYLKMKQLFISSNRIVKISFISQHLQALEDLDISYNN 447


>UniRef50_Q4UMJ8 Cluster: Site-specific recombinases; n=3;
           Rickettsia|Rep: Site-specific recombinases - Rickettsia
           felis (Rickettsia azadi)
          Length = 527

 Score = 32.3 bits (70), Expect = 5.7
 Identities = 31/113 (27%), Positives = 55/113 (48%), Gaps = 3/113 (2%)
 Frame = -1

Query: 379 KIVTTLQKDMDGVCEYERERERGVSVELTADRK**KR-KISCADPT**VNKKKIDLKL-- 209
           K++  ++  +D   EY ++R++ + VE    +    R K   +D T   ++++ + KL  
Sbjct: 363 KVINYIKNSIDIEQEYYKKRKQELEVESAEFKMRIDRIKDLFSDNT--FSREEYEWKLLE 420

Query: 208 YTQNNWKFKKKILHICNKHTS*NKNIRTVAVLSHNTRSLKDLIISYKNN*INM 50
           YTQ   + K +I  +CNK     K I  V + S   ++  DLI   K   IN+
Sbjct: 421 YTQKYQEIKNEI-EMCNKADDSTKLISLVKIASSAYQTFIDLIAEEKRKLINL 472


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 387,025,958
Number of Sequences: 1657284
Number of extensions: 6848657
Number of successful extensions: 15345
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 14792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15320
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 26870548160
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)