Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11k23
         (478 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.16 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    25   0.36 
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    24   0.63 
AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    23   1.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 26.2 bits (55), Expect = 0.16
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = +3

Query: 195 LFCVYNFKSIFFLFTY*VGSAQLIFLFYY 281
           L C+Y F   F LFT  +     I+ FYY
Sbjct: 235 LLCIYYFYYAFILFTVHLLLLVCIYYFYY 263



 Score = 23.8 bits (49), Expect = 0.83
 Identities = 13/42 (30%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
 Frame = +3

Query: 165 ICKIFFLN--FQLFCVYNFKSIFFLFTY*VGSAQLIFLFYYF 284
           +C  +F+   F L C+Y F   F +FT  V    L+ ++++F
Sbjct: 131 LCIYYFVVPLFFLLCIYYFYCAFIIFT--VHLLFLLCIYHFF 170



 Score = 23.4 bits (48), Expect = 1.1
 Identities = 11/27 (40%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
 Frame = +3

Query: 165 ICKIFFLNFQLF--CVYNFKSIFFLFT 239
           +C  +F    LF  C+Y F S F +FT
Sbjct: 197 LCLDYFTLHLLFLPCIYYFYSAFIIFT 223



 Score = 22.6 bits (46), Expect = 1.9
 Identities = 14/32 (43%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
 Frame = +3

Query: 195 LFCVYNFKSIFFLFTY*VGSAQLIFL--FYYF 284
           L CVY F   F +FT       L+FL   YYF
Sbjct: 110 LLCVYYFYYAFIIFT-----VHLLFLLCIYYF 136



 Score = 22.6 bits (46), Expect = 1.9
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
 Frame = +1

Query: 148 LCAYYIYARFFF*ISSYFVCT--ILNQSSFY 234
           LC YY Y      +  Y+ C   I+  + FY
Sbjct: 283 LCIYYFYCALIILLCIYYFCRAFIIFPTHFY 313



 Score = 21.8 bits (44), Expect = 3.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 195 LFCVYNFKSIFFLFT 239
           L C+Y+F   F +FT
Sbjct: 163 LLCIYHFFCAFIIFT 177



 Score = 21.0 bits (42), Expect = 5.8
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +1

Query: 148 LCAYYIYARFFF*ISSYF 201
           LC YY Y  F   +  Y+
Sbjct: 98  LCTYYFYYAFIILLCVYY 115



 Score = 21.0 bits (42), Expect = 5.8
 Identities = 9/24 (37%), Positives = 11/24 (45%), Gaps = 1/24 (4%)
 Frame = +1

Query: 148 LCAYYIYARFFF*IS-SYFVCTIL 216
           LC YY     FF +   YF C  +
Sbjct: 131 LCIYYFVVPLFFLLCIYYFYCAFI 154


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.0 bits (52), Expect = 0.36
 Identities = 10/23 (43%), Positives = 16/23 (69%)
 Frame = +2

Query: 56  YLVILVRNDKIFQRASVVTQYSD 124
           Y+V +  N +I Q+ S+VTQ +D
Sbjct: 57  YMVYITTNLRITQKLSIVTQLAD 79


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 24.2 bits (50), Expect = 0.63
 Identities = 15/35 (42%), Positives = 20/35 (57%)
 Frame = -1

Query: 181 KKILHICNKHTS*NKNIRTVAVLSHNTRSLKDLII 77
           KK L I N   S  KN+R  A    N +++KDL+I
Sbjct: 620 KKHLEI-NPDPSILKNLRQKAEADKNDKAVKDLVI 653


>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 22.6 bits (46), Expect = 1.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = +3

Query: 162 HICKIFFLNFQLFCVYNF 215
           H  +I F+  ++FC+ NF
Sbjct: 11  HSVRIVFVQSEIFCLVNF 28


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 98,721
Number of Sequences: 336
Number of extensions: 1898
Number of successful extensions: 14
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 11141978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)