Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11k22
         (210 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9G8P4 Cluster: ABC transporter subunit; n=1; Naegleria...    33   1.7  
UniRef50_Q6LF87 Cluster: Putative uncharacterized protein; n=1; ...    33   1.7  
UniRef50_Q8IWX5 Cluster: Sphingosine-1-phosphate phosphatase 2; ...    30   8.9  

>UniRef50_Q9G8P4 Cluster: ABC transporter subunit; n=1; Naegleria
           gruberi|Rep: ABC transporter subunit - Naegleria gruberi
          Length = 210

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 21/60 (35%), Positives = 28/60 (46%)
 Frame = +2

Query: 11  FSG*RSLMHGVLKGFGARITNLLIPTDYVIICIITIRYTFKYEFAFQN*KYK*FLSRKIF 190
           FS   +L  G++ G+    T  +       I I+ I + F Y F F N KYK FL   IF
Sbjct: 80  FSSFYTLFIGIIWGYSIWKTFTIFDLRIFFIFILFIYFLFDYSFPFFNIKYKIFLFFVIF 139


>UniRef50_Q6LF87 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium falciparum 3D7|Rep: Putative uncharacterized
           protein - Plasmodium falciparum (isolate 3D7)
          Length = 381

 Score = 32.7 bits (71), Expect = 1.7
 Identities = 12/30 (40%), Positives = 22/30 (73%), Gaps = 2/30 (6%)
 Frame = +3

Query: 120 DIHLNMNLHSKIENTNDSYHV--KYFLKNK 203
           D+H N+++HS++ENT++ Y +   +  KNK
Sbjct: 286 DVHNNLDIHSEVENTDEDYKIYDNHIEKNK 315


>UniRef50_Q8IWX5 Cluster: Sphingosine-1-phosphate phosphatase 2;
           n=21; Tetrapoda|Rep: Sphingosine-1-phosphate phosphatase
           2 - Homo sapiens (Human)
          Length = 399

 Score = 30.3 bits (65), Expect = 8.9
 Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
 Frame = -1

Query: 165 LYFQFWNANSYLNVYRIVIIHIIT*SVG-ISKFVILAPNPFKTPCIK 28
           L F  WN + YL+  R++II ++   +G ++K V+  P P   P +K
Sbjct: 106 LPFTHWNIDPYLS-RRLIIIWVLVMYIGQVAKDVLKWPRPSSPPVVK 151


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,777,834
Number of Sequences: 1657284
Number of extensions: 2785833
Number of successful extensions: 7494
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7353
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7493
length of database: 575,637,011
effective HSP length: 48
effective length of database: 496,087,379
effective search space used: 10417834959
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)