Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11k22
         (210 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1313 - 26065192-26065491,26065603-26065857,26067611-260677...    26   3.6  
04_03_0260 - 13580396-13582990                                         25   6.3  

>08_02_1313 -
           26065192-26065491,26065603-26065857,26067611-26067718,
           26068637-26068738
          Length = 254

 Score = 26.2 bits (55), Expect = 3.6
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = -1

Query: 174 KNHLYFQFWNANSYLNVYRIVIIHIIT*SVGIS 76
           K+H Y  +WNA  +   Y I+I+ I+    G+S
Sbjct: 165 KDHKYRIYWNAYHHSVGYTIIILGIVNIFKGMS 197


>04_03_0260 - 13580396-13582990
          Length = 864

 Score = 25.4 bits (53), Expect = 6.3
 Identities = 10/23 (43%), Positives = 17/23 (73%)
 Frame = -1

Query: 192 ENILRDKNHLYFQFWNANSYLNV 124
           E ++R +N L + F+NANS ++V
Sbjct: 822 EGVMRVENCLDYSFFNANSVISV 844


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,576,815
Number of Sequences: 37544
Number of extensions: 65296
Number of successful extensions: 124
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 14,793,348
effective HSP length: 49
effective length of database: 12,953,692
effective search space used: 259073840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)