Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11k22
(210 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC134342-1|AAI34343.1| 399|Homo sapiens sphingosine-1-phosphate... 30 1.2
BC106905-1|AAI06906.1| 396|Homo sapiens SGPP2 protein protein. 30 1.2
BC106904-1|AAI06905.1| 396|Homo sapiens SGPP2 protein protein. 30 1.2
AF542512-1|AAN28731.1| 399|Homo sapiens sphingosine 1-phosphate... 30 1.2
AC097461-1|AAX88957.1| 326|Homo sapiens unknown protein. 30 1.2
Z15009-1|CAA78729.1| 1111|Homo sapiens Laminin protein. 29 3.6
Z15008-1|CAA78728.1| 1193|Homo sapiens Laminin protein. 29 3.6
X73902-1|CAA52108.1| 1193|Homo sapiens nicein protein. 29 3.6
U31201-1|AAC50457.1| 1193|Homo sapiens laminin gamma2 chain prot... 29 3.6
U31200-1|AAC50456.1| 1111|Homo sapiens alternatively spliced lam... 29 3.6
BC113378-1|AAI13379.1| 1111|Homo sapiens laminin, gamma 2 protein. 29 3.6
BC112286-1|AAI12287.1| 1111|Homo sapiens laminin, gamma 2 protein. 29 3.6
AL354953-2|CAH70980.1| 1193|Homo sapiens laminin, gamma 2 protein. 29 3.6
>BC134342-1|AAI34343.1| 399|Homo sapiens sphingosine-1-phosphate
phosphotase 2 protein.
Length = 399
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 165 LYFQFWNANSYLNVYRIVIIHIIT*SVG-ISKFVILAPNPFKTPCIK 28
L F WN + YL+ R++II ++ +G ++K V+ P P P +K
Sbjct: 106 LPFTHWNIDPYLS-RRLIIIWVLVMYIGQVAKDVLKWPRPSSPPVVK 151
>BC106905-1|AAI06906.1| 396|Homo sapiens SGPP2 protein protein.
Length = 396
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 165 LYFQFWNANSYLNVYRIVIIHIIT*SVG-ISKFVILAPNPFKTPCIK 28
L F WN + YL+ R++II ++ +G ++K V+ P P P +K
Sbjct: 103 LPFTHWNIDPYLS-RRLIIIWVLVMYIGQVAKDVLKWPRPSSPPVVK 148
>BC106904-1|AAI06905.1| 396|Homo sapiens SGPP2 protein protein.
Length = 396
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 165 LYFQFWNANSYLNVYRIVIIHIIT*SVG-ISKFVILAPNPFKTPCIK 28
L F WN + YL+ R++II ++ +G ++K V+ P P P +K
Sbjct: 103 LPFTHWNIDPYLS-RRLIIIWVLVMYIGQVAKDVLKWPRPSSPPVVK 148
>AF542512-1|AAN28731.1| 399|Homo sapiens sphingosine 1-phosphate
phosphohydrolase 2 protein.
Length = 399
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 165 LYFQFWNANSYLNVYRIVIIHIIT*SVG-ISKFVILAPNPFKTPCIK 28
L F WN + YL+ R++II ++ +G ++K V+ P P P +K
Sbjct: 106 LPFTHWNIDPYLS-RRLIIIWVLVMYIGQVAKDVLKWPRPSSPPVVK 151
>AC097461-1|AAX88957.1| 326|Homo sapiens unknown protein.
Length = 326
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/47 (34%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 165 LYFQFWNANSYLNVYRIVIIHIIT*SVG-ISKFVILAPNPFKTPCIK 28
L F WN + YL+ R++II ++ +G ++K V+ P P P +K
Sbjct: 33 LPFTHWNIDPYLS-RRLIIIWVLVMYIGQVAKDVLKWPRPSSPPVVK 78
>Z15009-1|CAA78729.1| 1111|Homo sapiens Laminin protein.
Length = 1111
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 41 VLKGFGARITNLLIPTDYVIICIITIRYTFK 133
+L+G G RIT L+P + C +T YTF+
Sbjct: 288 ILEGAGLRITAPLMPLGKTLPCGLTKTYTFR 318
>Z15008-1|CAA78728.1| 1193|Homo sapiens Laminin protein.
Length = 1193
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 41 VLKGFGARITNLLIPTDYVIICIITIRYTFK 133
+L+G G RIT L+P + C +T YTF+
Sbjct: 288 ILEGAGLRITAPLMPLGKTLPCGLTKTYTFR 318
>X73902-1|CAA52108.1| 1193|Homo sapiens nicein protein.
Length = 1193
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 41 VLKGFGARITNLLIPTDYVIICIITIRYTFK 133
+L+G G RIT L+P + C +T YTF+
Sbjct: 288 ILEGAGLRITAPLMPLGKTLPCGLTKTYTFR 318
>U31201-1|AAC50457.1| 1193|Homo sapiens laminin gamma2 chain
protein.
Length = 1193
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 41 VLKGFGARITNLLIPTDYVIICIITIRYTFK 133
+L+G G RIT L+P + C +T YTF+
Sbjct: 288 ILEGAGLRITAPLMPLGKTLPCGLTKTYTFR 318
>U31200-1|AAC50456.1| 1111|Homo sapiens alternatively spliced
laminin gamma2 chain protein.
Length = 1111
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 41 VLKGFGARITNLLIPTDYVIICIITIRYTFK 133
+L+G G RIT L+P + C +T YTF+
Sbjct: 288 ILEGAGLRITAPLMPLGKTLPCGLTKTYTFR 318
>BC113378-1|AAI13379.1| 1111|Homo sapiens laminin, gamma 2 protein.
Length = 1111
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 41 VLKGFGARITNLLIPTDYVIICIITIRYTFK 133
+L+G G RIT L+P + C +T YTF+
Sbjct: 288 ILEGAGLRITAPLMPLGKTLPCGLTKTYTFR 318
>BC112286-1|AAI12287.1| 1111|Homo sapiens laminin, gamma 2 protein.
Length = 1111
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 41 VLKGFGARITNLLIPTDYVIICIITIRYTFK 133
+L+G G RIT L+P + C +T YTF+
Sbjct: 288 ILEGAGLRITAPLMPLGKTLPCGLTKTYTFR 318
>AL354953-2|CAH70980.1| 1193|Homo sapiens laminin, gamma 2 protein.
Length = 1193
Score = 28.7 bits (61), Expect = 3.6
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 41 VLKGFGARITNLLIPTDYVIICIITIRYTFK 133
+L+G G RIT L+P + C +T YTF+
Sbjct: 288 ILEGAGLRITAPLMPLGKTLPCGLTKTYTFR 318
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,615,058
Number of Sequences: 237096
Number of extensions: 366282
Number of successful extensions: 673
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 665
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 673
length of database: 76,859,062
effective HSP length: 48
effective length of database: 65,478,454
effective search space used: 1375047534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -