Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11k22
         (210 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98851-1|CAB11539.2|  327|Caenorhabditis elegans Hypothetical pr...    26   3.2  
U97000-9|AAC47998.1|  345|Caenorhabditis elegans Seven tm recept...    25   7.3  
L07144-7|AAK21444.2|  646|Caenorhabditis elegans Hypothetical pr...    25   7.3  
Z81016-5|CAB02665.3|  640|Caenorhabditis elegans Hypothetical pr...    25   9.7  
AF038606-7|AAB92021.1|  344|Caenorhabditis elegans Hypothetical ...    25   9.7  

>Z98851-1|CAB11539.2|  327|Caenorhabditis elegans Hypothetical
           protein H12I19.1 protein.
          Length = 327

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 15/50 (30%), Positives = 21/50 (42%)
 Frame = -1

Query: 159 FQFWNANSYLNVYRIVIIHIIT*SVGISKFVILAPNPFKTPCIKDRHPEK 10
           +QFW   SY+ VY   +I I T +      +I           K  +PEK
Sbjct: 181 YQFWLEFSYMTVYFATLIFIFTSAFFYIPIMISVRKLTNLTSAKQSNPEK 230


>U97000-9|AAC47998.1|  345|Caenorhabditis elegans Seven tm receptor
           protein 135 protein.
          Length = 345

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 9/18 (50%), Positives = 14/18 (77%)
 Frame = -3

Query: 166 FVFSILECKFIFKCISNC 113
           FV S+L C+FIF+ ++ C
Sbjct: 105 FVASLLACQFIFRYLAVC 122


>L07144-7|AAK21444.2|  646|Caenorhabditis elegans Hypothetical
           protein R05D3.9 protein.
          Length = 646

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 10/48 (20%), Positives = 26/48 (54%)
 Frame = -1

Query: 192 ENILRDKNHLYFQFWNANSYLNVYRIVIIHIIT*SVGISKFVILAPNP 49
           + +L +  +++  FWN+N  ++++   +   +   + IS+  +LA  P
Sbjct: 263 DKLLEEFRNVFILFWNSNRMVSLHTFNLWSRVADKIKISEDTLLAHVP 310


>Z81016-5|CAB02665.3|  640|Caenorhabditis elegans Hypothetical
           protein F21G4.1 protein.
          Length = 640

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = +1

Query: 46  EGIWRENHEFTNTY 87
           E  WRE+HE TN +
Sbjct: 143 EDCWREHHEHTNAF 156


>AF038606-7|AAB92021.1|  344|Caenorhabditis elegans Hypothetical
           protein C04C3.6 protein.
          Length = 344

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 9/34 (26%), Positives = 18/34 (52%)
 Frame = -1

Query: 162 YFQFWNANSYLNVYRIVIIHIIT*SVGISKFVIL 61
           + + W A S L  Y ++ + ++T    I  F++L
Sbjct: 18  FIKEWTATSQLLYYTVICVSVVTLPALIFMFIVL 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,468,156
Number of Sequences: 27780
Number of extensions: 71237
Number of successful extensions: 186
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 186
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 186
length of database: 12,740,198
effective HSP length: 49
effective length of database: 11,378,978
effective search space used: 227579560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)