Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11k21
(614 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 180 6e-46
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 71 1e-12
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 69 2e-12
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 69 2e-12
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 69 3e-12
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 68 5e-12
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 66 2e-11
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 4e-11
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 63 2e-10
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 60 1e-09
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 59 3e-09
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 58 6e-09
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 6e-09
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 57 1e-08
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 55 4e-08
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 54 1e-07
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 53 2e-07
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 1e-06
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 50 1e-06
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 50 2e-06
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 50 2e-06
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 50 2e-06
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 48 5e-06
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 46 2e-05
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 46 2e-05
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 45 4e-05
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 44 7e-05
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 7e-05
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 44 1e-04
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 44 1e-04
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 41 0.001
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 41 0.001
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 38 0.005
SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.005
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 38 0.006
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 38 0.006
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 38 0.006
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 37 0.011
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 36 0.020
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 36 0.034
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 36 0.034
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 35 0.060
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 34 0.080
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 34 0.11
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.11
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 34 0.11
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 34 0.11
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 33 0.14
SB_10158| Best HMM Match : MMR_HSR1 (HMM E-Value=9.4e-08) 33 0.18
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 33 0.24
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 33 0.24
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.32
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 32 0.42
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.56
SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.98
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 31 0.98
SB_27648| Best HMM Match : Ribosomal_L18ae (HMM E-Value=2.8) 31 0.98
SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_26846| Best HMM Match : Pox_A32 (HMM E-Value=0.0014) 29 2.3
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_12307| Best HMM Match : Death (HMM E-Value=0.00097) 29 4.0
SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12) 29 4.0
SB_57062| Best HMM Match : Pox_A32 (HMM E-Value=0.006) 28 5.2
SB_43364| Best HMM Match : Pox_A32 (HMM E-Value=0.0078) 28 5.2
SB_37988| Best HMM Match : Rho_N (HMM E-Value=0.0007) 28 5.2
SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 28 5.2
SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 28 5.2
SB_41374| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_31661| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.2
SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023) 28 5.2
SB_12117| Best HMM Match : Pox_A32 (HMM E-Value=0.0083) 28 5.2
SB_10414| Best HMM Match : Rho_N (HMM E-Value=0.0015) 28 5.2
SB_3818| Best HMM Match : Pox_A32 (HMM E-Value=0.022) 28 5.2
SB_59010| Best HMM Match : rve (HMM E-Value=0.0052) 28 6.9
SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014) 28 6.9
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 28 6.9
SB_43431| Best HMM Match : DEAD (HMM E-Value=6.4) 28 6.9
SB_36342| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1) 28 6.9
SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_26806| Best HMM Match : Annexin (HMM E-Value=0) 28 6.9
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 28 6.9
SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_25935| Best HMM Match : Pox_A32 (HMM E-Value=0.048) 27 9.1
SB_21174| Best HMM Match : Pox_A32 (HMM E-Value=0.024) 27 9.1
SB_15943| Best HMM Match : Pox_A32 (HMM E-Value=0.027) 27 9.1
SB_10024| Best HMM Match : Pox_A32 (HMM E-Value=3.3) 27 9.1
SB_47384| Best HMM Match : Pox_A32 (HMM E-Value=0.029) 27 9.1
SB_40358| Best HMM Match : Pox_A32 (HMM E-Value=0.058) 27 9.1
SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.1
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 180 bits (439), Expect = 6e-46
Identities = 87/128 (67%), Positives = 101/128 (78%), Gaps = 1/128 (0%)
Frame = +2
Query: 155 VGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGL 334
VGDGGTGKTTFVKRHLTGEFEKKY+ATLGVEVHPL+F T+RGPI+FNVWDTAGQEKFGGL
Sbjct: 38 VGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDTAGQEKFGGL 97
Query: 335 RDGYYIQGQCAIIMFDVTSRVTYKMYLT-GIEIWSVYVKVSLLSCAGTKWILKTEKLRRK 511
RDGYYIQGQCAIIMFDVTSRVTYK ++ V + ++ C G K +K K++ K
Sbjct: 98 RDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDLERVCENIPIVLC-GNKVDIKDRKVKAK 156
Query: 512 LLFSTEKR 535
+ K+
Sbjct: 157 AITFHRKK 164
Score = 146 bits (353), Expect = 2e-35
Identities = 64/70 (91%), Positives = 66/70 (94%)
Frame = +1
Query: 403 QNVPNWHRDLVRVCEGIPIVLCGNKVDIKDRKVKAKTIVFHRKKNLQYYDISAKSNYNFE 582
+NVPNWHRDL RVCE IPIVLCGNKVDIKDRKVKAK I FHRKKNLQYYD+SAKSNYNFE
Sbjct: 121 KNVPNWHRDLERVCENIPIVLCGNKVDIKDRKVKAKAITFHRKKNLQYYDLSAKSNYNFE 180
Query: 583 KPFLWLARKL 612
KPFLWLARKL
Sbjct: 181 KPFLWLARKL 190
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/89 (39%), Positives = 53/89 (59%)
Frame = +2
Query: 137 TFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQ 316
+FK ++VGD G GKT+ ++R G F +T+GV+V V + ++ WDTAGQ
Sbjct: 11 SFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAGQ 70
Query: 317 EKFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
EKF G+ YY I++FD+T+R T+
Sbjct: 71 EKFRGITQSYYRNADAVILVFDITNRGTF 99
Score = 29.1 bits (62), Expect = 3.0
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Frame = +1
Query: 406 NVPNWHRDLVRVC-EGIPIVLCGNKVDIK--DRKVKAKTIV-FHRKKNLQYYDISAKSNY 573
++P W ++ + + I VL GNK D+K RKV ++ + L Y + SAK +
Sbjct: 101 SIPQWLMNVQKYTNKNILKVLVGNKTDLKGASRKVNTRSAANLAEFEELLYLETSAKWDD 160
Query: 574 NFEKPFLWLARKL 612
N E LA +L
Sbjct: 161 NVEVLIAELAEQL 173
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 70.5 bits (165), Expect = 1e-12
Identities = 34/112 (30%), Positives = 60/112 (53%)
Frame = +2
Query: 113 TKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRF 292
T++ FK V +GD G GK++F+ R +++ + AT+GV+ + N I
Sbjct: 888 TRLKTPERVFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAI 947
Query: 293 NVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKMYLTGIEIWSVYVK 448
+WDTAGQE+F + Y+ + +I +DVT+ ++ T ++ W V V+
Sbjct: 948 QLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSF----TNLKKWMVSVE 995
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 69.3 bits (162), Expect = 2e-12
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = +2
Query: 119 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNV 298
M D FK +LVGD GKT V++ G F T+GV+ + ++ +
Sbjct: 1 MDDYSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQI 60
Query: 299 WDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKMYLTGIEIWSVYV-KVSLLSCAGT 475
WDTAGQE+F + YY I+ +D+T++ +++ ++ + Y K L++ G
Sbjct: 61 WDTAGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGN 120
Query: 476 KWILKTEK 499
K L T +
Sbjct: 121 KSDLSTNR 128
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 69.3 bits (162), Expect = 2e-12
Identities = 31/96 (32%), Positives = 55/96 (57%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 319
FK VL+G+ GK++ V R + G+F + +T+G + ++F +WDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 320 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKMYLTGIE 427
++ L YY Q AI+++D+T++ T+ T ++
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVK 117
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 68.9 bits (161), Expect = 3e-12
Identities = 38/120 (31%), Positives = 61/120 (50%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 319
FK +L+GD G GK++ + R F Y++T+GV+ + I+ +WDTAGQE
Sbjct: 9 FKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDTAGQE 68
Query: 320 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKMYLTGIEIWSVYVKVSLLSCAGTKWILKTEK 499
+F L YY ++++DV T+ ++L+ W +VS +C G IL K
Sbjct: 69 RFRTLTTAYYRSAHGIVLIYDVNESETF-LHLSQ---W--LEEVSEYACEGVNTILVGNK 122
Score = 38.3 bits (85), Expect = 0.005
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 3/79 (3%)
Frame = +1
Query: 385 NLSSYVQNVPNWHRDLVR-VCEGIPIVLCGNKVDIKD-RKVKAKTI-VFHRKKNLQYYDI 555
N S ++ W ++ CEG+ +L GNK D+ D R+V T F K ++ + +
Sbjct: 91 NESETFLHLSQWLEEVSEYACEGVNTILVGNKCDLIDCRQVGYNTAKEFAEKLDISFIET 150
Query: 556 SAKSNYNFEKPFLWLARKL 612
SAK + N E F +A +L
Sbjct: 151 SAKDSTNVESVFRTMAAEL 169
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 68.1 bits (159), Expect = 5e-12
Identities = 33/103 (32%), Positives = 57/103 (55%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 319
+K VL+GD G GK++ + R EF+ + +T+GVE I+ VWDTAGQE
Sbjct: 13 YKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDTAGQE 72
Query: 320 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKMYLTGIEIWSVYVK 448
++ + YY A++++D+T + T++ +E W + V+
Sbjct: 73 RYRAITSAYYRGAVGAVLVYDLTKQKTFQ----DVERWLLEVR 111
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 66.9 bits (156), Expect = 1e-11
Identities = 33/103 (32%), Positives = 55/103 (53%)
Frame = +2
Query: 98 NSNKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNR 277
++ K K M K V +GD G GK++ R + FE+KY T+G++ +
Sbjct: 150 HTRKGYKTITLMGGHKIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDD 209
Query: 278 GPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYK 406
+R +WDTAGQE+F L Y + A+I+FD+T+ +++
Sbjct: 210 FEVRLQIWDTAGQERFRCLIHSYIRDSEAALIVFDITNYTSFE 252
Score = 32.7 bits (71), Expect = 0.24
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 4/80 (5%)
Frame = +1
Query: 385 NLSSYVQNVPNWHRDLVRVCEG--IPIVLCGNKVDIKDRKVKAKTIVFH--RKKNLQYYD 552
N +S+ ++V +W + +VR G I++ GNK+D DR+ + + + L Y +
Sbjct: 247 NYTSF-ESVGDWVK-MVRDERGEKAVIIIVGNKMDESDRRKVSYDVAEKSAERLGLSYVE 304
Query: 553 ISAKSNYNFEKPFLWLARKL 612
SAKS YN + F L++ L
Sbjct: 305 TSAKSGYNVKLLFTKLSKDL 324
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 66.5 bits (155), Expect = 2e-11
Identities = 26/89 (29%), Positives = 51/89 (57%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 319
FK +++G+ GKT+F+ R+ F +V+T+G++ N ++ +WDTAGQE
Sbjct: 22 FKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDTAGQE 81
Query: 320 KFGGLRDGYYIQGQCAIIMFDVTSRVTYK 406
++ + YY I+M+D+T+ +++
Sbjct: 82 RYRTITTAYYRGAMGFILMYDITNEESFQ 110
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 66.5 bits (155), Expect = 2e-11
Identities = 34/107 (31%), Positives = 56/107 (52%), Gaps = 3/107 (2%)
Frame = +2
Query: 125 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWD 304
D + T K ++VG+ G GK++ + R F+ AT+GV+ + +WD
Sbjct: 4 DVLTTLKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWD 63
Query: 305 TAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTY---KMYLTGIEIWS 436
TAGQE+F L YY Q I+++D SR T+ + +L +E++S
Sbjct: 64 TAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYS 110
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/97 (31%), Positives = 51/97 (52%), Gaps = 1/97 (1%)
Frame = +2
Query: 137 TFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQ 316
TFK +++GD GKT R TG+F ++ T+GV+ N ++ +WDTAGQ
Sbjct: 46 TFKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTAGQ 105
Query: 317 EKF-GGLRDGYYIQGQCAIIMFDVTSRVTYKMYLTGI 424
E+F + YY + M+D+T + +++ T I
Sbjct: 106 ERFRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWI 142
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 62.9 bits (146), Expect = 2e-10
Identities = 29/90 (32%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFN--VWDTAG 313
F+ +L+GD GK++ +++ G+F + T+GV+ H V +G +R +WDTAG
Sbjct: 14 FRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLEL-KGDVRIKLQIWDTAG 72
Query: 314 QEKFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
QE+F + YY +I++D+T+R ++
Sbjct: 73 QERFRSITYSYYRNTVGCLIIYDITNRDSF 102
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 60.5 bits (140), Expect = 1e-09
Identities = 27/88 (30%), Positives = 44/88 (50%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 319
FK VL GD GK++F+ R F +TLGV+ + +WDTAGQE
Sbjct: 443 FKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQE 502
Query: 320 KFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
+F + Y+ + ++++DVT ++
Sbjct: 503 RFRSIAKSYFRKADGVLLLYDVTCETSF 530
Score = 34.7 bits (76), Expect = 0.060
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 9/78 (11%)
Frame = +1
Query: 406 NVPNWHRDLVRVC-EGIPIVLCGNKVDIK-DRKVKAKTIV-------FHRKKNLQYYDIS 558
+V +W + C + +PI+LCGNK+DI+ + KT++ ++ + + S
Sbjct: 532 DVRDWVEAIEESCSKPVPIMLCGNKIDIRQSAAAENKTVITAESGSRLAKEHGALFIETS 591
Query: 559 AKSNYNFEKPFLWLARKL 612
+K N N + + LAR L
Sbjct: 592 SKENKNIAEACIELARML 609
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 58.8 bits (136), Expect = 3e-09
Identities = 28/91 (30%), Positives = 50/91 (54%)
Frame = +2
Query: 131 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTA 310
M +K V++G GG GK+ + +TG+F +KY T+ + + + P + DTA
Sbjct: 1 MKEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTI-EDFYRKEIEVDNNPSILEILDTA 59
Query: 311 GQEKFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
G E+F +RD Y GQ ++++ + +R T+
Sbjct: 60 GTEQFASMRDLYIKNGQGFLLVYSLINRQTF 90
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +1
Query: 433 VRVCEGIPIVLCGNKVDIKDRK 498
V+ E +PIVL GNK DI D +
Sbjct: 103 VKGSENVPIVLVGNKSDIYDER 124
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 58.0 bits (134), Expect = 6e-09
Identities = 25/88 (28%), Positives = 50/88 (56%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 319
FK +++GD GK++ ++R EF + T+GV+ F + ++ +WDTAG+E
Sbjct: 11 FKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAGEE 70
Query: 320 KFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
K+ L ++ A+++FDV+ + ++
Sbjct: 71 KYRALSRSFFRGADGALLVFDVSVKESF 98
Score = 37.9 bits (84), Expect = 0.006
Identities = 22/52 (42%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Frame = +1
Query: 460 VLCGNKVDIKDRKVKAKTIV-FHRKKNLQYYDISAKSNYNFEKPFLWLARKL 612
+L GNK D KD+KV + I NL + + SAK N N + F +ARKL
Sbjct: 120 ILVGNKCDKKDKKVSEEDIQNLSSCYNLSWLETSAKDNTNVNEAFEAMARKL 171
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 58.0 bits (134), Expect = 6e-09
Identities = 31/92 (33%), Positives = 48/92 (52%)
Frame = +2
Query: 131 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTA 310
M T KCV+VGDG GKT + + T +F +YV T+ + + + P ++DTA
Sbjct: 1 MQTIKCVVVGDGAVGKTCLLISYTTNKFPSEYVPTV-FDNYAVTVMIGGEPYTLGLFDTA 59
Query: 311 GQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYK 406
GQE + LR Y Q ++ F V S +++
Sbjct: 60 GQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFE 91
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 57.2 bits (132), Expect = 1e-08
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVE-VHPLVFHTNRGPIRFNVWDTAGQ 316
FK ++VGD TGK +FVKR++ + Y T+GV+ + IR +W AGQ
Sbjct: 19 FKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWLIAGQ 78
Query: 317 EKFGGLRDGYYIQGQCAIIMFDVTSRVT 400
E+F + YY +++FD+ + T
Sbjct: 79 ERFSSMTRVYYKGADACVVLFDLERQTT 106
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 57.2 bits (132), Expect = 1e-08
Identities = 30/87 (34%), Positives = 42/87 (48%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
KCV+VGDGG GKT+ + ++ F YV T + + + N+ DTAGQE
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGFPNSYVPT-AFDTYHVTVEVNKKLCMIEFCDTAGQED 78
Query: 323 FGGLRDGYYIQGQCAIIMFDVTSRVTY 403
F LR Y I+ F V S ++
Sbjct: 79 FDALRPLCYSSADVFIVCFSVVSPTSF 105
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 55.2 bits (127), Expect = 4e-08
Identities = 29/88 (32%), Positives = 42/88 (47%)
Frame = +2
Query: 122 ADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVW 301
A+ P FK VL+G+ G GKT+ R F T+G++ + +VW
Sbjct: 6 AERGPLFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVW 65
Query: 302 DTAGQEKFGGLRDGYYIQGQCAIIMFDV 385
DTAG E+F + YY I+MF+V
Sbjct: 66 DTAGVERFRTVTKNYYRGAHACILMFNV 93
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/94 (28%), Positives = 47/94 (50%)
Frame = +2
Query: 152 LVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGG 331
L DGG GK++ + R + G+F+ + T+GVE + +WDTAGQE+F
Sbjct: 216 LSSDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKS 275
Query: 332 LRDGYYIQGQCAIIMFDVTSRVTYKMYLTGIEIW 433
LR +Y ++++ V ++ T + +W
Sbjct: 276 LRTPFYRGSDLCLLVYAVDDAKSF----TNLSMW 305
Score = 35.5 bits (78), Expect = 0.034
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Frame = +1
Query: 433 VRVCEGIPIVLCGNKVDIKDRKVKAKTIVFHRKKN--LQYYDISAKSNYNFEKPFLWLAR 606
VR + P +L GNKVD++ R V + ++N + Y++ SAK + N F+ +
Sbjct: 315 VRDQDNFPFILLGNKVDVEGRAVSQEEADSWCRQNGGVPYFETSAKDSTNVNDAFIAAVK 374
Query: 607 KL 612
+L
Sbjct: 375 RL 376
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 53.2 bits (122), Expect = 2e-07
Identities = 28/88 (31%), Positives = 44/88 (50%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
K V+VGDGG GK+ F+ T F +Y+ T+ + + +WDTAGQE
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSNIMLDGKA-YNVGLWDTAGQED 65
Query: 323 FGGLRDGYYIQGQCAIIMFDVTSRVTYK 406
+ LR Y ++ FD+ SR +++
Sbjct: 66 YDRLRPLSYPMTDVFLVCFDIGSRTSFE 93
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 52.8 bits (121), Expect = 2e-07
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 11/98 (11%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV-------HPLV---FHTNRGP-IR 289
K + +GD G GKT+ + ++ F ++V T+G++ HPL + RG I
Sbjct: 108 KFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQRIH 167
Query: 290 FNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
+WDTAGQE+F L ++ +++FD+T ++
Sbjct: 168 LQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSF 205
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 50.4 bits (115), Expect = 1e-06
Identities = 29/100 (29%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Frame = +2
Query: 212 FEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTS 391
+ + Y++T+GV+ + I+ +WDTAGQE+F + YY I+++DVT
Sbjct: 54 YTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTD 113
Query: 392 RVTY---KMYLTGIEIWSVYVKVSLLSCAGTKWILKTEKL 502
+ ++ K +L I+ ++ LL G K L T+K+
Sbjct: 114 QESFNNVKQWLQEIDRYACENVNKLL--VGNKCDLTTKKV 151
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 50.0 bits (114), Expect = 1e-06
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 2/125 (1%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 319
F+ V++G GG GKT+ VKR ++G F ++Y T+G V + + DTAG
Sbjct: 108 FRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTAGSY 167
Query: 320 KFGGLRDGYYIQGQCAIIMFDVTSRVTYKMYLTGIEIWSVYVKVSL--LSCAGTKWILKT 493
F ++ ++++ V + + + L ++ VY+K + G K L +
Sbjct: 168 PFPAMKKLTIQNADAFVLVYSVDEKASLQEALE-LQREIVYIKGKTVPMVLVGNKTDLVS 226
Query: 494 EKLRR 508
E+LR+
Sbjct: 227 EELRQ 231
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/90 (27%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYV-ATLGV-EVHPLVFHTNRGPIRFNVWDTAG 313
FK +++G+ G GK+ V + F+ K+V +T+ + ++ F + I+ + DTAG
Sbjct: 351 FKTLIIGNSGVGKSCLVNKLKNPHFDLKFVTSTVSMNDIFWEYFLYDNKKIKLTIGDTAG 410
Query: 314 QEKFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
QE++ + Y+ Q ++FD+T +T+
Sbjct: 411 QERYFSILPAYFRGVQGVFLVFDITVEITF 440
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 49.6 bits (113), Expect = 2e-06
Identities = 26/89 (29%), Positives = 44/89 (49%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 319
+K V+VG GG GK+ + + F Y T+ R ++ DTAGQE
Sbjct: 12 YKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCVIDER-VAHLDILDTAGQE 70
Query: 320 KFGGLRDGYYIQGQCAIIMFDVTSRVTYK 406
+F +R+ Y G+ +++F VT R +++
Sbjct: 71 EFSAMREQYMRSGEGFLLVFSVTDRSSFE 99
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 49.6 bits (113), Expect = 2e-06
Identities = 21/64 (32%), Positives = 35/64 (54%)
Frame = +2
Query: 212 FEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTS 391
F Y+ T+GV+ + + ++ +WDTAGQE+F + YY I+++DVTS
Sbjct: 2 FSGSYITTIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTS 61
Query: 392 RVTY 403
T+
Sbjct: 62 ADTF 65
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 48.4 bits (110), Expect = 5e-06
Identities = 19/57 (33%), Positives = 34/57 (59%)
Frame = +2
Query: 233 TLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
T+GVE + + ++ +WDTAGQE+F + YY A++++D++SR T+
Sbjct: 127 TIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETF 183
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 46.8 bits (106), Expect = 1e-05
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTA 310
FK VL+GD G GK+ + R+ EF AT+GVE+ +R +WDTA
Sbjct: 19 FKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDTA 75
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 46.4 bits (105), Expect = 2e-05
Identities = 24/80 (30%), Positives = 40/80 (50%)
Frame = +2
Query: 149 VLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFG 328
+LVGD GKT + ++ +F +KY AT+ + V + I +WDT+G E +
Sbjct: 236 ILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTAV-EVDGERIELTLWDTSGHEDYD 294
Query: 329 GLRDGYYIQGQCAIIMFDVT 388
+R Y +I FD++
Sbjct: 295 HVRPLSYNNVDIVLICFDIS 314
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +2
Query: 287 RFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
+FN+WDTAGQE+F L YY AI+++D+T T+
Sbjct: 10 KFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTF 48
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/77 (31%), Positives = 39/77 (50%)
Frame = +2
Query: 152 LVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGG 331
LVG +GKTTFV +G+F + + T+G + + ++G + VWD GQ +F
Sbjct: 25 LVGLQYSGKTTFVNVIASGQFSEDMIPTVGFNMRKV----SKGNVTIKVWDIGGQPRFRS 80
Query: 332 LRDGYYIQGQCAIIMFD 382
+ + Y C + M D
Sbjct: 81 MWERYCRGVNCIVYMVD 97
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 44.4 bits (100), Expect = 7e-05
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDT 307
FK VL+GD G GK+ + R EF + +T+GVE + I+ +WDT
Sbjct: 12 FKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 44.4 bits (100), Expect = 7e-05
Identities = 26/94 (27%), Positives = 42/94 (44%)
Frame = +2
Query: 125 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWD 304
+D T K +VGDG GKT T F +Y+ T F+ + + ++D
Sbjct: 2 EDYVTLKLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFD 61
Query: 305 TAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYK 406
+AG E F LR Y ++ FD+ R +++
Sbjct: 62 SAGGEDFDRLRPLGYPNTDIFLVCFDIAHRASFE 95
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 44.0 bits (99), Expect = 1e-04
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
K V+VGDG GKT + +F + YV T+ E + + + +WDTAGQE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTV-FENYVADIEVDGKQVELALWDTAGQED 5989
Query: 323 FGGLRDGYYIQGQCAIIMFDVTS 391
+ LR Y ++ F + S
Sbjct: 5990 YDRLRPLSYPDTDVILMCFSIDS 6012
Score = 31.5 bits (68), Expect = 0.56
Identities = 11/31 (35%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 400 VQNVPN-WHRDLVRVCEGIPIVLCGNKVDIK 489
++N+P W ++ C +PI+L GNK D++
Sbjct: 6016 LENIPEKWTPEVKHFCPNVPIILVGNKKDLR 6046
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 44.0 bits (99), Expect = 1e-04
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Frame = +1
Query: 445 EGIPIVLCGNKVDIKDRKVKAKTIVF--HRKKNLQYYDISAKSNYNFEKPFLWLAR 606
E P V+ GNK+D+++R V AK H K ++ Y++ SAK N E+ F +A+
Sbjct: 56 ENFPFVVLGNKIDLENRAVSAKRAQAWCHSKNDIPYFETSAKEAINVEQAFQTIAK 111
Score = 42.3 bits (95), Expect = 3e-04
Identities = 16/37 (43%), Positives = 24/37 (64%)
Frame = +2
Query: 296 VWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYK 406
+WDTAGQE+F L +Y C +++FDVT ++K
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFK 37
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/91 (28%), Positives = 46/91 (50%)
Frame = +2
Query: 131 MPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTA 310
M +K V++G GG GK+ + +TG+F +KY T+ + + TA
Sbjct: 1 MKEYKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-----------------DFYHTA 43
Query: 311 GQEKFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
G E+F +RD Y GQ ++++ + +R T+
Sbjct: 44 GTEQFASMRDLYIKNGQGFLLVYSLINRQTF 74
Score = 35.5 bits (78), Expect = 0.034
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Frame = +1
Query: 433 VRVCEGIPIVLCGNKVDIKD-RKV---KAKTIVFHRKKNLQYYDISAKSNYNFEKPFLWL 600
V+ E +PIVL GNK DI D R+V +AK + +Y+ SAK+ N +K F +
Sbjct: 87 VKGSENVPIVLVGNKSDIYDEREVSVGEAKDLA--EAWGCPFYETSAKTRSNVDKVFAEV 144
Query: 601 ARKL 612
R++
Sbjct: 145 VRRM 148
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 40.7 bits (91), Expect = 0.001
Identities = 16/41 (39%), Positives = 24/41 (58%)
Frame = +2
Query: 284 IRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYK 406
++ +WDTAGQE+F + YY II +D+T T+K
Sbjct: 95 VKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFK 135
Score = 28.7 bits (61), Expect = 4.0
Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 4/74 (5%)
Frame = +1
Query: 403 QNVPNWHRDLVRVC-EGIPIVLCGNKVDI-KDRKVKAKTIV--FHRKKNLQYYDISAKSN 570
+NV W D+ + E +L GNK D+ ++R+V + V L + SAK
Sbjct: 135 KNVIRWGEDVQKYAPENAIKLLVGNKKDLEREREVSLEDAVNCASHYGMLDVLETSAKDA 194
Query: 571 YNFEKPFLWLARKL 612
N E F LAR+L
Sbjct: 195 TNIEAAFYRLAREL 208
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 40.7 bits (91), Expect = 0.001
Identities = 25/88 (28%), Positives = 38/88 (43%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
K VL GD GKT+F+ E E A E L ++WDT G +
Sbjct: 8 KVVLTGDNNVGKTSFLINLTQNELEGTPTAFANYE---LGLEVGSQKFLLDLWDTEGTTE 64
Query: 323 FGGLRDGYYIQGQCAIIMFDVTSRVTYK 406
+ LR Y ++ FD+++R T++
Sbjct: 65 YDRLRPLTYQGSDIILLCFDISNRQTFE 92
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 39.9 bits (89), Expect = 0.002
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Frame = +1
Query: 406 NVPNWHRDLVRVC-EGIPIVLCGNKVDIKDRKV--KAKTIVFHRKKNLQYYDISAKSNYN 576
N+ W R++ E + ++ GNK D+ DR++ + + R+ +++ + SAK+N N
Sbjct: 142 NISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIAREHGIRFLETSAKTNIN 201
Query: 577 FEKPFLWLARKL 612
E+ F +LA+ +
Sbjct: 202 IEQAFQYLAQDI 213
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 238
FK +L+GD G GKT + R F +++T+
Sbjct: 10 FKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 38.3 bits (85), Expect = 0.005
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +2
Query: 284 IRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
I+ +WDTAGQE+F + YY ++++DVT+ ++
Sbjct: 5 IKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSF 44
>SB_33999| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 38.3 bits (85), Expect = 0.005
Identities = 15/34 (44%), Positives = 24/34 (70%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 241
FK ++VGD GKT+FV+R++ G ++Y T+G
Sbjct: 23 FKVLIVGDATVGKTSFVQRYVHGNTRREYKPTIG 56
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 37.9 bits (84), Expect = 0.006
Identities = 23/79 (29%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Frame = +1
Query: 382 RNLSSYVQNVPNWHRDLVRVCEGIPIVLCGNKVDIKDRKV--KAKTIVFHRKKNLQYYDI 555
+++S ++QN+ + VC+ VL GNK+D +D +V + NL++Y+
Sbjct: 18 KHISQWLQNIED--NASPNVCK----VLLGNKLDAEDERVIDAQRGRSVGEDNNLEFYEA 71
Query: 556 SAKSNYNFEKPFLWLARKL 612
SA++ N ++ F+ +ARK+
Sbjct: 72 SARTGENVQQAFMAVARKI 90
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 37.9 bits (84), Expect = 0.006
Identities = 31/80 (38%), Positives = 38/80 (47%)
Frame = +2
Query: 152 LVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGG 331
++G GKTT + R L E V TLG V + + I F VWD GQ+K
Sbjct: 1 MIGLDNAGKTTILYR-LKLEEVVSTVPTLGFNVETVTYKN----ISFTVWDIGGQDKIRA 55
Query: 332 LRDGYYIQGQCAIIMFDVTS 391
L YY QG C I+F V S
Sbjct: 56 LWRVYY-QG-CQGIIFVVDS 73
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 37.9 bits (84), Expect = 0.006
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFN--VWDTAG 313
+K ++G GG GKT+ +K +F +K+V T+ + N + ++ + DTAG
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD---DYFIHSVNMDGVYYSTCIVDTAG 69
Query: 314 QEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKMYLTGI-EIWSVYVK 448
F +R Q I++F + S +++ I EI+S+ VK
Sbjct: 70 TYAFPVMRRLAIHTCQAFIVVFAINSESSFREAFEIIDEIYSIKVK 115
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/61 (31%), Positives = 33/61 (54%)
Frame = +2
Query: 158 GDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEKFGGLR 337
G G GKT+ VKR G+F ++Y T+ + + V + N + N D++G +F +R
Sbjct: 15 GGAGVGKTSIVKRFYCGKFSEEYEPTV-EDCYSKVLNKNGSIMVLNTTDSSGSYQFPAMR 73
Query: 338 D 340
+
Sbjct: 74 E 74
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 37.1 bits (82), Expect = 0.011
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
+ ++VG GKTT + + GE + T+G V + + I F VWD GQ+K
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVETVEYKN----ISFTVWDVGGQDK 73
Query: 323 FGGLRDGYYIQGQCAIIMFDVTSR 394
L Y+ Q I + D R
Sbjct: 74 IRPLWRHYFQNTQGLIFVVDSNDR 97
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 36.7 bits (81), Expect = 0.015
Identities = 25/84 (29%), Positives = 37/84 (44%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
+ ++VG GKTT + + GE + T+G V + + I F VWD GQ+K
Sbjct: 19 RILMVGLDAAGKTTILYKLKLGEIVTT-IPTIGFNVESVEYKN----ISFTVWDVGGQDK 73
Query: 323 FGGLRDGYYIQGQCAIIMFDVTSR 394
L Y+ Q I + D R
Sbjct: 74 IRPLWRHYFQNTQGLIYVVDSNDR 97
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 36.3 bits (80), Expect = 0.020
Identities = 27/84 (32%), Positives = 41/84 (48%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
+ ++VG GKTT + HL + + T+G V +V + N I+F VWD GQ+K
Sbjct: 92 RLLMVGLDAAGKTTILY-HLKLDEPVNTIPTIGFNVE-VVEYKN---IKFTVWDIGGQDK 146
Query: 323 FGGLRDGYYIQGQCAIIMFDVTSR 394
L Y+ + Q I + D R
Sbjct: 147 IRLLWRLYFQETQGLIFVVDSNDR 170
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 35.5 bits (78), Expect = 0.034
Identities = 21/79 (26%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
Frame = +1
Query: 385 NLSSYVQNVPNWHRDLVRV--CEGIPIVLCGNKVDIKDRKVKAKTI-VFHRKKNLQYYDI 555
N S +++ + + RV E +P+VL GNK D+ R V + N+ + +
Sbjct: 311 NNSKSFEDINQYREQIKRVKDAEEVPMVLVGNKCDLPQRTVSTSDAQELAKSYNIPFQET 370
Query: 556 SAKSNYNFEKPFLWLARKL 612
SAK+ + F L R++
Sbjct: 371 SAKTRQGVDDAFYTLVREI 389
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 293 NVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYK 406
++ DTAGQE++ +RD Y G+ + +F V + +++
Sbjct: 280 DILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFE 317
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 35.5 bits (78), Expect = 0.034
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 1/85 (1%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEF-EKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQ 316
F+ +VG GG GK++ R+L EF E Y L V DTAGQ
Sbjct: 2599 FRLCVVGSGGVGKSSVTIRYLKNEFTEIDYCGKL---------------YDIEVVDTAGQ 2643
Query: 317 EKFGGLRDGYYIQGQCAIIMFDVTS 391
E++ RD G +++F + S
Sbjct: 2644 EEYTSFRDSSLATGDAFLVLFAINS 2668
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 34.7 bits (76), Expect = 0.060
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQ- 316
++ L+GD G GKT + R L F +Y T+ + + + + + + DTA +
Sbjct: 6 YRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKYRKSI-NIDDVTVTLEILDTASRG 64
Query: 317 EKFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
+ LRD + +G I+++ R T+
Sbjct: 65 QNSCKLRDQFVREGDGFIVVYSTADRSTF 93
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 34.3 bits (75), Expect = 0.080
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 3/107 (2%)
Frame = +1
Query: 301 GHSRTREVWWS*RRILYSRTMCYHHVRRNLSSYVQNVPNWHRDL-VRVCEGIPIVLCGNK 477
G R R + S R + + Y +R SY N+ W ++ EG+ ++L GNK
Sbjct: 377 GQERFRTITSSYYRGAHGVMIVYDITKRE--SY-NNLHKWLMEVETYASEGVHMILVGNK 433
Query: 478 VDI-KDRKVKAKTI-VFHRKKNLQYYDISAKSNYNFEKPFLWLARKL 612
+D+ DR+V+ + ++ + + SAK N ++ FL L+R L
Sbjct: 434 IDLDTDREVQPDAAQEWAALHDMPFVETSAKGAKNVKEAFLVLSRLL 480
Score = 31.1 bits (67), Expect = 0.74
Identities = 13/35 (37%), Positives = 21/35 (60%)
Frame = +2
Query: 299 WDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
W+ AGQE+F + YY +I++D+T R +Y
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESY 407
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 33.9 bits (74), Expect = 0.11
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEV 250
FK +++GD G GKT+ +KR++ F Y AT+ +
Sbjct: 672 FKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATVSFNI 708
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 33.9 bits (74), Expect = 0.11
Identities = 20/86 (23%), Positives = 40/86 (46%)
Frame = +2
Query: 125 DDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWD 304
+ +P + +++G G+GK+ F+ G+ K+ +T E +V T G + N+W+
Sbjct: 162 NSVPEKRILVLGLDGSGKSVFLSALSQGDSSKR-PSTTKTEGFNVVCLTTDG-LNLNIWE 219
Query: 305 TAGQEKFGGLRDGYYIQGQCAIIMFD 382
G EK+ + Q + + D
Sbjct: 220 IGGDEKYRAYWPNFIADTQLLVYVVD 245
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 33.9 bits (74), Expect = 0.11
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 241
+ V++G G GKT V R +TG F +Y TLG
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 33.9 bits (74), Expect = 0.11
Identities = 27/84 (32%), Positives = 39/84 (46%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQE 319
F V++G +GKT+ + R+ E+ V T V + +G IRF VWD G+E
Sbjct: 22 FHVVMLGLDKSGKTSILYRNKFREYVNT-VPTTAFNVETI--RPFKG-IRFKVWDIGGRE 77
Query: 320 KFGGLRDGYYIQGQCAIIMFDVTS 391
+ L Y Q I + D TS
Sbjct: 78 QNRPLWKAYARQTDAVIYVVDSTS 101
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 33.5 bits (73), Expect = 0.14
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 302 DTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKM 409
DTAG+EK+ GL Y AI+ +D+T + K+
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKV 313
>SB_10158| Best HMM Match : MMR_HSR1 (HMM E-Value=9.4e-08)
Length = 340
Score = 33.1 bits (72), Expect = 0.18
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Frame = +2
Query: 119 MADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVF----HTNR-GP 283
+ D TFK ++VG G GK+ HL +YV G ++ P H R G
Sbjct: 54 LEDSCRTFKVIVVGRTGVGKS-----HLVNTLMGEYVVEEGQDLDPCTSTVSKHEKRIGR 108
Query: 284 IRFNVWDTAGQEKFGGLRDGYYI 352
R VWD+ G + G D Y+
Sbjct: 109 TRVTVWDSPGLQD-GHHEDEVYL 130
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 33.1 bits (72), Expect = 0.18
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = +2
Query: 257 LVFHTNRGPIRFNVWDTAGQEKFGGLRDGYY 349
++ N IR +WDTAGQE+F + YY
Sbjct: 25 MIQSANGEDIRLMLWDTAGQEEFDAITKAYY 55
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 32.7 bits (71), Expect = 0.24
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 98 NSNKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLG 241
N K+ D++ + + V++G G GK+ R LT F +Y +TLG
Sbjct: 3 NRRKSLDPNDNVRSLRVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG 50
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 32.7 bits (71), Expect = 0.24
Identities = 26/74 (35%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
Frame = +1
Query: 403 QNVPNWHRDLVRVCEG--IPIVLCGNKVDIKD-RKVKAKTIVFHRKK-NLQYYDISAKSN 570
Q W D VR G + I+L GNK D+ D R+V A+ K+ N+ + + SAK+
Sbjct: 15 QQTSKWIDD-VRTERGNDVIIMLVGNKTDLSDKRQVTAEEGERKAKELNVMFIETSAKAG 73
Query: 571 YNFEKPFLWLARKL 612
YN ++ F +A L
Sbjct: 74 YNVKQLFRRVAAAL 87
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 32.3 bits (70), Expect = 0.32
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +2
Query: 134 PTFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATL 238
PT K V VGD GKT+F+ T F ++A++
Sbjct: 8 PTIKVVFVGDKNVGKTSFLYAATTHNFPTGFIASI 42
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 31.9 bits (69), Expect = 0.42
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Frame = +1
Query: 343 ILYSRTMCY-HHVRRNLSSYVQNVPNWHRDLVRVCEGIPIVLCGNKVDIKDRKVKAKTIV 519
++YS T Y + + R L V V R +C+ IPIVL GNK D++ + AK
Sbjct: 39 VVYSITDYYSYEMARQLVKLVTQV----RKTDDICQ-IPIVLVGNKRDLRRGRCVAKDEA 93
Query: 520 --FHRKKNLQYYDISAKSNYNFEKPFLWLA 603
F + +Y+ SA +N N F +A
Sbjct: 94 REFASEYGCSHYETSALTNRNVHVIFYNMA 123
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 31.5 bits (68), Expect = 0.56
Identities = 15/44 (34%), Positives = 24/44 (54%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN 274
+ +L+G GKT+ K L F+ + V+T G+EV P F +
Sbjct: 361 RIMLIGQDRAGKTSLKKSLLGLPFDPREVSTEGIEVDPSTFEVD 404
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/57 (29%), Positives = 28/57 (49%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTA 310
+ VL+G G GK+ + R TG F +Y TL + + + + P ++ DTA
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEM-TYDVSATIDEDPATLHITDTA 183
>SB_52232| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 929
Score = 30.7 bits (66), Expect = 0.98
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = +1
Query: 415 NWHRDLVRVCEGIPIVLCGNKVDIKDRK 498
+W+ ++ C PIVL G K+D++D K
Sbjct: 575 SWYPEVSHHCPNTPIVLVGTKLDLRDDK 602
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 30.7 bits (66), Expect = 0.98
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = +1
Query: 457 IVLCGNKVDIKDRKVKA--KTIVFHRKKNLQYYDISAKSNYNFEKPF 591
++L GNK D+++ +V + + + L++Y+ SAK N N +K F
Sbjct: 15 VILVGNKCDMEEERVVSYDRGKQLADQLGLEFYETSAKDNTNVKKVF 61
>SB_27648| Best HMM Match : Ribosomal_L18ae (HMM E-Value=2.8)
Length = 796
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYV 229
F ++VG GKT F++ L G F KY+
Sbjct: 90 FNALIVGPTSCGKTRFIRGRLRGPFRGKYI 119
>SB_53088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 204
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/44 (34%), Positives = 23/44 (52%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN 274
+ +L+G GKT+ K L F+ V+T G+EV P F +
Sbjct: 83 RIMLIGQDRAGKTSLKKSLLGIPFDPGEVSTEGIEVDPSTFEVD 126
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 4/84 (4%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKR-HLTGEF---EKKYVATLGVEVHPLVFHTNRGPIRFNVWDT 307
+K VLVGD G GK+ + R + T E + Y T G + T + DT
Sbjct: 14 YKVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTGGHAS---YFTASNSCHLYLLDT 70
Query: 308 AGQEKFGGLRDGYYIQGQCAIIMF 379
+G E++ L Y C + F
Sbjct: 71 SGLEEYRELTKIYLKNLDCVVFTF 94
>SB_26846| Best HMM Match : Pox_A32 (HMM E-Value=0.0014)
Length = 509
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/39 (30%), Positives = 21/39 (53%)
Frame = +2
Query: 98 NSNKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 214
N+ K ++ + +P F C++ G GKT ++ L G F
Sbjct: 99 NTKKMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 136
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/92 (23%), Positives = 35/92 (38%), Gaps = 5/92 (5%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRG-----PIRFNVWDT 307
+ +VGD G GKT+ V E T+G V ++ G WD
Sbjct: 8 RIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTFFLEFWDI 67
Query: 308 AGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTY 403
G R +Y I++ D+T+R ++
Sbjct: 68 GGSANHENSRSIFYNGINGLILVHDLTNRKSF 99
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN 274
+ +L+G GKT+ K F+ V+T G+EV P F +
Sbjct: 292 RIMLIGQDRAGKTSLKKSLFGIPFDPSEVSTEGIEVDPSTFEVD 335
>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 351 FKDNVLSSCST*PLELRTKC 410
F +N LS ST P+ELR KC
Sbjct: 1471 FLENALSDVSTPPIELRNKC 1490
>SB_12307| Best HMM Match : Death (HMM E-Value=0.00097)
Length = 1366
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIR 289
+ +L+G GKT+ K L F+ + +T G+EV P F + +R
Sbjct: 363 RIMLIGQDRAGKTSLKKSLLGLRFDPQEESTEGIEVDPSRFEVDVEQVR 411
>SB_9492| Best HMM Match : Rho_N (HMM E-Value=2.1e-12)
Length = 1970
Score = 28.7 bits (61), Expect = 4.0
Identities = 11/43 (25%), Positives = 22/43 (51%)
Frame = +2
Query: 98 NSNKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKY 226
N+ + ++ + +P F C++ G GKT ++ L G F +
Sbjct: 1649 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPFRNVF 1690
>SB_57062| Best HMM Match : Pox_A32 (HMM E-Value=0.006)
Length = 485
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 98 NSNKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 214
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 274 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 311
>SB_43364| Best HMM Match : Pox_A32 (HMM E-Value=0.0078)
Length = 759
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 98 NSNKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 214
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 358 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 395
>SB_37988| Best HMM Match : Rho_N (HMM E-Value=0.0007)
Length = 1018
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 98 NSNKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 214
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 847 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 884
>SB_34401| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 2629
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 98 NSNKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 214
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 2111 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 2148
>SB_15820| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1998
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 98 NSNKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 214
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 1756 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 1793
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 28.3 bits (60), Expect = 5.2
Identities = 14/37 (37%), Positives = 17/37 (45%)
Frame = +2
Query: 284 IRFNVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSR 394
I F VWD GQ+K L Y+ Q I + D R
Sbjct: 510 ISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR 546
>SB_41374| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1039
Score = 28.3 bits (60), Expect = 5.2
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKY 226
F ++VG GKT FV L G F+ K+
Sbjct: 373 FNALIVGPASCGKTQFVVDRLRGPFQGKF 401
>SB_31661| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 864
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 98 NSNKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 214
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 457 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 494
>SB_15052| Best HMM Match : Pox_A32 (HMM E-Value=0.0023)
Length = 1901
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 98 NSNKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 214
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 1282 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 1319
>SB_12117| Best HMM Match : Pox_A32 (HMM E-Value=0.0083)
Length = 220
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 98 NSNKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 214
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 9 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 46
>SB_10414| Best HMM Match : Rho_N (HMM E-Value=0.0015)
Length = 916
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 98 NSNKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 214
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 705 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 742
>SB_3818| Best HMM Match : Pox_A32 (HMM E-Value=0.022)
Length = 766
Score = 28.3 bits (60), Expect = 5.2
Identities = 11/39 (28%), Positives = 21/39 (53%)
Frame = +2
Query: 98 NSNKTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEF 214
N+ + ++ + +P F C++ G GKT ++ L G F
Sbjct: 457 NTKRMEELREKVP-FHCIITGPTNCGKTKYLTEQLRGPF 494
>SB_59010| Best HMM Match : rve (HMM E-Value=0.0052)
Length = 935
Score = 27.9 bits (59), Expect = 6.9
Identities = 15/40 (37%), Positives = 18/40 (45%)
Frame = +2
Query: 107 KTTKMADDMPTFKCVLVGDGGTGKTTFVKRHLTGEFEKKY 226
KT M F ++VG GKT FV L G F K+
Sbjct: 194 KTCGMDPKNVPFNALIVGPTSCGKTQFVVDRLRGPFRGKF 233
>SB_37884| Best HMM Match : Ubie_methyltran (HMM E-Value=0.00014)
Length = 399
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -3
Query: 234 VATYFFSNSPVKCLLTKVVLPVPPSPTNTHL 142
V +YF +N PV P PP P+ T L
Sbjct: 5 VGSYFSTNCPVTNCKVNADFPTPPDPSTTTL 35
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 143 KCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTNRGPIRFNVWDTAGQEK 322
+ V++G GKTT + + E + T+G V L N + +WD GQ+K
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLKETVST-IPTIGFNVETLQPTKN---VTLTIWDVGGQDK 76
Query: 323 FGGLRDGYYIQG 358
L +Y QG
Sbjct: 77 IRPLW-RHYFQG 87
>SB_43431| Best HMM Match : DEAD (HMM E-Value=6.4)
Length = 209
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKYV 229
F ++VG GKT F+ L G F K+V
Sbjct: 74 FNALIVGPTSCGKTRFIVDRLRGPFRGKFV 103
>SB_36342| Best HMM Match : Viral_helicase1 (HMM E-Value=1.1)
Length = 872
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = +2
Query: 107 KTTKMADDMPTFKCVLVGDGGTGKTTFVK 193
K + ADD + V+ G GGTGK+ +K
Sbjct: 282 KYLEQADDYVPLRLVVSGTGGTGKSYMIK 310
>SB_35286| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 564
Score = 27.9 bits (59), Expect = 6.9
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +2
Query: 149 VLVGDGGTGKTTFVKRHLTGE 211
V++G+ GTGKTTF+ R L G+
Sbjct: 349 VMLGENGTGKTTFI-RMLAGK 368
>SB_26806| Best HMM Match : Annexin (HMM E-Value=0)
Length = 829
Score = 27.9 bits (59), Expect = 6.9
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 188 VKRHLTGEFEKKYVATLGVEVHPLVFHTNRGP 283
VK +G+FE VA + V + L++H + P
Sbjct: 107 VKEETSGDFEDLLVALMSVRISTLIYHLIKTP 138
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 27.9 bits (59), Expect = 6.9
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 4/74 (5%)
Frame = +1
Query: 403 QNVPNWHRDLVRVC-EGIPIVLCGNKVD--IKDRKVKAKTIVFHRKKN-LQYYDISAKSN 570
+ VP W + C IP+VL GNK D + K+ + + N Y + SA
Sbjct: 62 ERVPTWLDKVQEHCGHEIPVVLVGNKTDRPLNSWKIPSNVAAKYATNNGFLYIETSALGM 121
Query: 571 YNFEKPFLWLARKL 612
N ++ F L L
Sbjct: 122 CNIDEIFAILLELL 135
>SB_52576| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1649
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/38 (28%), Positives = 19/38 (50%)
Frame = +1
Query: 352 SRTMCYHHVRRNLSSYVQNVPNWHRDLVRVCEGIPIVL 465
SR + +NL Q V D+++ C+G+P+ L
Sbjct: 369 SRELLMKSAHKNLEELSQQVRRLVEDILKECDGLPLAL 406
>SB_25935| Best HMM Match : Pox_A32 (HMM E-Value=0.048)
Length = 310
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKY 226
F ++VG GKT FV L G F K+
Sbjct: 134 FNALIVGPTSCGKTQFVVERLCGPFRGKF 162
>SB_21174| Best HMM Match : Pox_A32 (HMM E-Value=0.024)
Length = 702
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKY 226
F ++VG GKT FV L G F K+
Sbjct: 286 FNALIVGPTSCGKTQFVVERLCGPFRGKF 314
>SB_15943| Best HMM Match : Pox_A32 (HMM E-Value=0.027)
Length = 804
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKY 226
F ++VG GKT FV L G F K+
Sbjct: 276 FNALIVGPTSCGKTQFVVERLCGPFRGKF 304
>SB_10024| Best HMM Match : Pox_A32 (HMM E-Value=3.3)
Length = 651
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKY 226
F ++VG GKT FV L G F K+
Sbjct: 406 FNALIVGPTSCGKTQFVVERLCGPFRGKF 434
>SB_47384| Best HMM Match : Pox_A32 (HMM E-Value=0.029)
Length = 327
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKY 226
F ++VG GKT FV L G F K+
Sbjct: 8 FNALIVGPTSCGKTQFVVERLCGPFRGKF 36
>SB_40358| Best HMM Match : Pox_A32 (HMM E-Value=0.058)
Length = 874
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 140 FKCVLVGDGGTGKTTFVKRHLTGEFEKKY 226
F ++VG GKT FV L G F K+
Sbjct: 286 FNALIVGPTSCGKTQFVVERLCGPFRGKF 314
>SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 27.5 bits (58), Expect = 9.1
Identities = 11/26 (42%), Positives = 17/26 (65%)
Frame = +2
Query: 149 VLVGDGGTGKTTFVKRHLTGEFEKKY 226
+++G +GKTT+V HL +KKY
Sbjct: 487 MMIGLPASGKTTWVNNHLNEHPDKKY 512
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 27.5 bits (58), Expect = 9.1
Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)
Frame = +2
Query: 137 TFKCVLVGDGGTGKTTFVKRHLTGEFEKKYVATLGVEVHPLVFHTN--RGPIRFNVWDTA 310
+ K +LVG GKTT + R + AT G+ + + F +WD
Sbjct: 551 SMKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFIFKIWDFG 610
Query: 311 GQEKF 325
GQE +
Sbjct: 611 GQEDY 615
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,186,758
Number of Sequences: 59808
Number of extensions: 440468
Number of successful extensions: 1740
Number of sequences better than 10.0: 106
Number of HSP's better than 10.0 without gapping: 1552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1719
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1512078125
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -