Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11k18
         (705 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    25   0.60 
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   5.6  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   7.4  
AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical pro...    21   9.8  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.60
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = +3

Query: 387 RNLQNNEANDQQFFFVNGQIISAVSIEEICREIDDIFK 500
           R + +     + F++++ QII+  +IE +C  +  + K
Sbjct: 220 REIVDKNRRGEIFYYMHQQIIARFNIERLCNGLKRVVK 257


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.6
 Identities = 6/21 (28%), Positives = 15/21 (71%)
 Frame = +3

Query: 423 FFFVNGQIISAVSIEEICREI 485
           F++++ QII+  + E +C ++
Sbjct: 232 FYYMHQQIIARYNFERLCNKL 252


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 7.4
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 296 CSFLQVQSAEHCR 258
           C FL++  A HCR
Sbjct: 66  CLFLEMTLAHHCR 78


>AM712901-1|CAN84640.1|  205|Tribolium castaneum hypothetical
           protein protein.
          Length = 205

 Score = 21.0 bits (42), Expect = 9.8
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -3

Query: 91  VTDECFRVMLVYVCYKPQNTFYNDIF 14
           +T   F ++ VY C    N F   +F
Sbjct: 150 LTSPIFNLVYVYCCDNNFNVFLRQVF 175


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,674
Number of Sequences: 336
Number of extensions: 2616
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18634795
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)