Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11k18
(705 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_18787| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_53752| Best HMM Match : TSP_1 (HMM E-Value=8.5e-11) 30 2.1
SB_24596| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0) 29 2.8
SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06) 29 2.8
SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0) 29 3.7
SB_39667| Best HMM Match : rve (HMM E-Value=9e-32) 29 3.7
SB_33483| Best HMM Match : TSP_1 (HMM E-Value=0) 29 4.9
SB_34744| Best HMM Match : zf-CCHC (HMM E-Value=0.018) 29 4.9
SB_54568| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_25366| Best HMM Match : Tctex-1 (HMM E-Value=2.6e-08) 28 6.4
SB_10520| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_37914| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.4
SB_6137| Best HMM Match : NACHT (HMM E-Value=0.00017) 28 6.4
SB_53267| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_29230| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_57479| Best HMM Match : PKD_channel (HMM E-Value=0) 28 8.5
SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_44623| Best HMM Match : RUN (HMM E-Value=1.6e-15) 28 8.5
SB_42130| Best HMM Match : rve (HMM E-Value=5.9e-13) 28 8.5
SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11) 28 8.5
SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12) 28 8.5
>SB_26915| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3934
Score = 37.9 bits (84), Expect = 0.008
Identities = 34/150 (22%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Frame = +3
Query: 240 DNEPAMTTMLSALDLKKTTFD-SAQLLKKVRRKVAR-QLSDKSIIDYNDFIRNLQNNEAN 413
D E S DL KTT + + ++R KV + +K++ Y+ I +E+
Sbjct: 2040 DVEKNYAAAASEADLMKTTLQVREETVDELREKVELLEEKEKALELYSKSIAEKYEHESQ 2099
Query: 414 DQQFFFVNGQIISAVSIEEICREIDDIFKSIDRLASATSTLRNRKPDVVQCSISAGDLSF 593
+++ + + ++E R+ ++ +S+++ S S R +Q ++ D+S
Sbjct: 2100 EKKKI-----VEISETLESKNRKQQELLESLEKKLSEFSEKEERMASKIQLPVNESDISS 2154
Query: 594 DDTIDQIDEEKIDQCIEEAFEELSGSFTSV 683
D + E K+D + + EELS S ++V
Sbjct: 2155 TDVAMETLEGKLDMIVRHS-EELSNSLSAV 2183
>SB_18787| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 636
Score = 30.7 bits (66), Expect = 1.2
Identities = 31/108 (28%), Positives = 37/108 (34%)
Frame = +3
Query: 219 DEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQ 398
D+ T D + T+ L LK FD AQ L R V Q K DF L+
Sbjct: 148 DDSHTGRDTALNLNTLQGKLRLKLHQFDEAQTLSSPRCGVTEQNMRKGRETLRDFANRLR 207
Query: 399 NNEANDQQFFFVNGQIISAVSIEEICREIDDIFKSIDRLASATSTLRN 542
+ F G S I + D F S AS S L N
Sbjct: 208 VTTTRRVRRFVTQGSKWSHSKIRWTIKSGD--FSSKMSEASVKSVLTN 253
>SB_53752| Best HMM Match : TSP_1 (HMM E-Value=8.5e-11)
Length = 635
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 585 SLRLRCCTAPRPAYGSSGCL 526
S R R CT P+PA+G S C+
Sbjct: 399 STRKRSCTNPKPAWGGSDCI 418
>SB_24596| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1907
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/57 (28%), Positives = 28/57 (49%)
Frame = +3
Query: 234 EEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQNN 404
EE EP +T +L+ KKT +++ +RR + + + DY+ IR L +
Sbjct: 896 EEFKEPEITVPEPSLEPKKTELPASEPASTLRRSTRLKTTPTHLKDYSSRIRTLNRS 952
>SB_47942| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2195
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 582 LRLRCCTAPRPAYGSSGCL*PKPVCQSI 499
+R R CT PRP +G C P Q+I
Sbjct: 699 IRTRTCTRPRPQFGGRNCSMQGPNAQTI 726
>SB_39021| Best HMM Match : M (HMM E-Value=5.3e-06)
Length = 1691
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 171 NEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLK 320
NEQ E WK V+ + +T D + A +++ D++ TT S ++L+
Sbjct: 945 NEQGTMTESSWKDVESESTKT-HDKQKANGNEVTSCDIETTTDFSIEILE 993
>SB_7335| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 2681
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -1
Query: 579 RLRCCTAPRPAYGSSGC 529
R R CT P PAYG GC
Sbjct: 980 RRRYCTNPEPAYGGLGC 996
>SB_39667| Best HMM Match : rve (HMM E-Value=9e-32)
Length = 1845
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/61 (26%), Positives = 28/61 (45%)
Frame = +3
Query: 234 EEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQNNEAN 413
EE EP +T +L+ KKT +++ +RR + + + DY + + NE
Sbjct: 1124 EEFKEPEITVPEPSLEPKKTELPASEPASTLRRSTRLKTTPTHLKDYKKYNSSKATNEKA 1183
Query: 414 D 416
D
Sbjct: 1184 D 1184
>SB_33483| Best HMM Match : TSP_1 (HMM E-Value=0)
Length = 372
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = -1
Query: 582 LRLRCCTAPRPAYGSSGC 529
+RLR CT P P YG C
Sbjct: 201 VRLRSCTNPEPQYGGKNC 218
>SB_34744| Best HMM Match : zf-CCHC (HMM E-Value=0.018)
Length = 296
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +3
Query: 144 LDLETILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLK 287
LDL++ L E W + EE W+ ++ T ++ + + T+ S + LK
Sbjct: 10 LDLDSRNLA-EAWREFEESWELYEISSGLTTKEEKVQVATLYSIVGLK 56
>SB_54568| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 77
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +3
Query: 342 RQLSDKSIIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSIEEICREIDDIFK 500
+Q +++++D N ++ Q +N +I E+CR++ D+FK
Sbjct: 19 QQWRNQAVVDENQRLQRQQQKRLTFFNENNINDNMIHDYDFLEVCRKLSDVFK 71
>SB_25366| Best HMM Match : Tctex-1 (HMM E-Value=2.6e-08)
Length = 556
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/67 (29%), Positives = 29/67 (43%)
Frame = +3
Query: 207 PVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFI 386
PV + P M M+ A L AQ L RR+ R + S + + DF
Sbjct: 272 PVSAHSSGSSLSGGPTMIGMIRARKLAVKIKKRAQFLVAERRR--RDNAGTSAVVHRDFP 329
Query: 387 RNLQNNE 407
RNL+N++
Sbjct: 330 RNLRNDD 336
>SB_10520| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1280
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 582 LRLRCCTAPRPAYGSSGC 529
LR+R C P PAYG + C
Sbjct: 161 LRMRTCDNPAPAYGGADC 178
>SB_37914| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 254
Score = 28.3 bits (60), Expect = 6.4
Identities = 20/77 (25%), Positives = 38/77 (49%), Gaps = 5/77 (6%)
Frame = +3
Query: 144 LDLETILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLK-----KTTFDSA 308
LD+++ L E W + +E W+ ++ T ++ + + T+ S L LK KT +
Sbjct: 10 LDIDSRNLA-ETWREWQESWELYEISSGLTAKEEKVQVATLYSVLGLKACRVLKTLPNVP 68
Query: 309 QLLKKVRRKVARQLSDK 359
+ L +R V +L D+
Sbjct: 69 ESLANRKRNVPLRLVDQ 85
>SB_15868| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1103
Score = 28.3 bits (60), Expect = 6.4
Identities = 9/24 (37%), Positives = 19/24 (79%)
Frame = +3
Query: 594 DDTIDQIDEEKIDQCIEEAFEELS 665
+D + +I+ E++ + +E+AF+ELS
Sbjct: 384 EDLLSRIEREEVSEALEDAFKELS 407
>SB_6137| Best HMM Match : NACHT (HMM E-Value=0.00017)
Length = 1243
Score = 28.3 bits (60), Expect = 6.4
Identities = 44/175 (25%), Positives = 73/175 (41%), Gaps = 6/175 (3%)
Frame = +3
Query: 189 LEEDWKPVDLDEDRTEED--NEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKS 362
L E+WK D+D R D N + D +K+ Q +K KV + S+KS
Sbjct: 188 LFEEWKKADVDLLREIRDVGNVVVQSVSKEIQDSEKSISKVIQDSEKSISKVIQD-SEKS 246
Query: 363 IIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSIEEICREIDDIF-KSIDRLASATSTLR 539
I + IR+L+ + V ++I SI E+C+++DD+ K +D +
Sbjct: 247 I---SKEIRDLEQS---------VREEVIR--SIHEVCQKLDDVTNKDLDEAERVEFAKQ 292
Query: 540 NRKPDVVQCSISAGDLSFDDTIDQID-EEKIDQCIEEAFEE--LSGSFTSVCQNE 695
+ ++ L D +D D ++ I Q I E + E +C NE
Sbjct: 293 EKDSSFLEDVKVVLLLQCRDLVDVSDWKDVIRQAIPEHYSEQDQESIIRYICDNE 347
>SB_53267| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 144 LDLETILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLK 287
LD+++ L E W + EE W+ ++ T ++ + + T+ S + LK
Sbjct: 10 LDMDSRNLA-EAWREFEESWELYEISSGLTTKEEKVQVATLYSIVGLK 56
>SB_29230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 214
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 144 LDLETILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLK 287
LD+++ L E W + EE W+ ++ T ++ + + T+ S + LK
Sbjct: 10 LDMDSRNLA-EAWREFEESWELYEISSGLTTKEEKVQVATLYSIVGLK 56
>SB_21309| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1286
Score = 27.9 bits (59), Expect = 8.5
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -1
Query: 579 RLRCCTAPRPAYGSSGC 529
R R CT PRPA+G + C
Sbjct: 32 RTRNCTNPRPAFGGADC 48
>SB_57479| Best HMM Match : PKD_channel (HMM E-Value=0)
Length = 939
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +3
Query: 204 KPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKK 323
KPVD+DE+ TE P S DL + D +KK
Sbjct: 187 KPVDVDEEETELKEVPKHMREKSVQDLLREMEDEEDEIKK 226
>SB_57099| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2509
Score = 27.9 bits (59), Expect = 8.5
Identities = 31/130 (23%), Positives = 54/130 (41%), Gaps = 8/130 (6%)
Frame = +3
Query: 330 RKVARQLSDKSIIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSIEEICREIDDIFKSID 509
R+V QLS I + I L N+ D Q + + +++ D + + +D
Sbjct: 1348 REVQAQLSQLESISEKEIIPRL--NKIEDVQLALPQLRELDRAHTQDLLDRWDQVTEQVD 1405
Query: 510 ----RLASATSTLRNRKPDVVQCSISAGDLSFDDTIDQIDE----EKIDQCIEEAFEELS 665
RLA L Q ++A D+ + +E E+ Q +E+ EEL+
Sbjct: 1406 ERMRRLARGLQGLHG-----FQTPLAAERTWLDEAELKAEELRSAEEHAQSVEQRMEELT 1460
Query: 666 GSFTSVCQNE 695
+T VC++E
Sbjct: 1461 NFYTEVCRHE 1470
>SB_44623| Best HMM Match : RUN (HMM E-Value=1.6e-15)
Length = 1277
Score = 27.9 bits (59), Expect = 8.5
Identities = 15/71 (21%), Positives = 34/71 (47%)
Frame = +3
Query: 153 ETILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRR 332
+T L++ E++ ++ EDW+ V+ + E+D+E +M + + F+ +++
Sbjct: 759 QTDLVKREEYQQILEDWRSVETYIIQNEKDHEVDGLSM-GSTGSRDEVFEQLEMISTGLE 817
Query: 333 KVARQLSDKSI 365
K K I
Sbjct: 818 KTVENPDGKDI 828
>SB_42130| Best HMM Match : rve (HMM E-Value=5.9e-13)
Length = 975
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 144 LDLETILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLK 287
LD+++ L E W + EE W+ ++ T ++ + + T+ S + LK
Sbjct: 10 LDMDSRNLA-EAWREFEESWELYEISSGLTTKEEKVQVATLYSIVGLK 56
>SB_13671| Best HMM Match : RVT_1 (HMM E-Value=1.8e-11)
Length = 1702
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 144 LDLETILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLK 287
LD+++ L E W + EE W+ ++ T ++ + + T+ S + LK
Sbjct: 666 LDMDSRNLA-EAWREFEESWELYEISSGLTTKEEKVQVATLYSIVGLK 712
>SB_8862| Best HMM Match : rve (HMM E-Value=3.3e-12)
Length = 1358
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/48 (27%), Positives = 26/48 (54%)
Frame = +3
Query: 144 LDLETILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLK 287
LD+++ L E W + EE W+ ++ T ++ + + T+ S + LK
Sbjct: 10 LDMDSRNLA-EAWREFEESWELYEISSGLTTKEEKVQVATLYSIVGLK 56
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,053,621
Number of Sequences: 59808
Number of extensions: 317461
Number of successful extensions: 1205
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1074
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1201
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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