Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11k18
(705 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical p... 33 0.26
AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein. 33 0.26
Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical pr... 31 0.80
AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein... 31 0.80
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 31 1.1
Z70308-9|CAA94346.2| 402|Caenorhabditis elegans Hypothetical pr... 30 1.9
U56964-6|AAB54035.1| 848|Caenorhabditis elegans Hypothetical pr... 30 1.9
D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein. 29 3.2
D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein. 29 3.2
D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein. 29 3.2
D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein. 29 3.2
AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical ... 29 3.2
AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical ... 29 3.2
AC025726-11|AAY43987.1| 294|Caenorhabditis elegans Hypothetical... 29 3.2
U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical pr... 29 4.3
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 29 4.3
U40955-5|AAA81753.1| 263|Caenorhabditis elegans Hypothetical pr... 29 4.3
Z70212-1|CAA94162.1| 406|Caenorhabditis elegans Hypothetical pr... 28 5.7
U80845-4|ABB51197.1| 287|Caenorhabditis elegans Hypothetical pr... 28 5.7
U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate recep... 28 5.7
U13876-5|AAA21176.2| 449|Caenorhabditis elegans Mammalian bysti... 28 5.7
AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic gl... 28 5.7
U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z81074-11|CAB03045.2| 562|Caenorhabditis elegans Hypothetical p... 27 9.9
Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical pr... 27 9.9
Z49912-1|CAA90140.1| 588|Caenorhabditis elegans Hypothetical pr... 27 9.9
U88167-3|AAB42224.2| 363|Caenorhabditis elegans Hypothetical pr... 27 9.9
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 27 9.9
U41264-6|AAA82426.1| 437|Caenorhabditis elegans Hypothetical pr... 27 9.9
AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical... 27 9.9
AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical ... 27 9.9
AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical... 27 9.9
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical
protein T28C6.9 protein.
Length = 1861
Score = 32.7 bits (71), Expect = 0.26
Identities = 48/192 (25%), Positives = 86/192 (44%), Gaps = 11/192 (5%)
Frame = +3
Query: 117 VNVRMGTKLLDLETILL--RNEQWM----KLEEDWKPVDLDEDRTEEDNEPAMTTMLSAL 278
V R+ TK LD + +L +NEQ M +LE D +R + E + + SAL
Sbjct: 3 VEDRLKTKALDKKCRVLVEQNEQLMARLCELEMSHGGADETRERRLAEQEERIRQISSAL 62
Query: 279 DLKKTTFDSAQLLKKVRRKVARQLSDKSIIDY---NDFIRNLQNNEANDQQFFFVNGQII 449
+ ++ D Q L++ + + ++L +K + N F R+++ + Q
Sbjct: 63 ESER---DVGQRLREAKEVLEKELMNKKKTEEASNNRFQRDVEMSRMEAQN--------- 110
Query: 450 SAVSIEEICREIDDIFKSIDRLASATSTLRNRKPDVVQCSISAGDLSFDDTIDQID--EE 623
IEE+ E+D K ++ + S LR D +Q I + ++ D + E+
Sbjct: 111 ---KIEEMSVEVDAAHKKVNEVLSEVEQLRATNFD-LQMHIETAKRTMEELADCNEELEK 166
Query: 624 KIDQCIEEAFEE 659
++D+ EEA EE
Sbjct: 167 RVDE-YEEAAEE 177
>Z36753-17|CAA85342.1| 821|Caenorhabditis elegans Hypothetical
protein T09A5.10 protein.
Length = 821
Score = 32.7 bits (71), Expect = 0.26
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +3
Query: 282 LKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQNN-EANDQQFFFVNGQIISAV 458
LK T D+ +L+K+ R R L+D + + L A Q + Q+
Sbjct: 324 LKTVTEDNGKLMKQARE--LRDLNDYEFARFRQQEQELTETLRATQDQMADLQEQLTGVE 381
Query: 459 SIEEICR-EIDDIFKSIDRLASATSTLRNRKP-DVVQCSISAGDLSFDDTIDQIDEEKID 632
I + E + + S++ L+ A+ LRN++ D + +S F++T+D++ +EK++
Sbjct: 382 KIRASLKSENESLSASVEELSVAS--LRNKQDADNSKTMLSEELARFEETVDKLRQEKLE 439
>AF240692-1|AAF61239.1| 821|Caenorhabditis elegans LIN-5 protein.
Length = 821
Score = 32.7 bits (71), Expect = 0.26
Identities = 29/120 (24%), Positives = 57/120 (47%), Gaps = 3/120 (2%)
Frame = +3
Query: 282 LKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQNN-EANDQQFFFVNGQIISAV 458
LK T D+ +L+K+ R R L+D + + L A Q + Q+
Sbjct: 324 LKTVTEDNGKLMKQARE--LRDLNDYEFARFRQQEQELTETLRATQDQMADLQEQLTGVE 381
Query: 459 SIEEICR-EIDDIFKSIDRLASATSTLRNRKP-DVVQCSISAGDLSFDDTIDQIDEEKID 632
I + E + + S++ L+ A+ LRN++ D + +S F++T+D++ +EK++
Sbjct: 382 KIRASLKSENESLSASVEELSVAS--LRNKQDADNSKTMLSEELARFEETVDKLRQEKLE 439
>Z79598-3|CAB01865.1| 680|Caenorhabditis elegans Hypothetical
protein C44H4.3 protein.
Length = 680
Score = 31.1 bits (67), Expect = 0.80
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +3
Query: 210 VDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIR 389
VD DE+ TEE+ E TT S TT A KKV + +LS+K + F+R
Sbjct: 521 VDDDEEGTEEEEEEVSTTEKSTTTTTTTT--EASKSKKVNMERFWRLSNKP-SGKSPFLR 577
Query: 390 NLQNNE 407
+ Q N+
Sbjct: 578 HSQGNK 583
>AJ242473-1|CAB43345.1| 680|Caenorhabditis elegans SYM-1 protein
protein.
Length = 680
Score = 31.1 bits (67), Expect = 0.80
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +3
Query: 210 VDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIR 389
VD DE+ TEE+ E TT S TT A KKV + +LS+K + F+R
Sbjct: 521 VDDDEEGTEEEEEEVSTTEKSTTTTTTTT--EASKSKKVNMERFWRLSNKP-SGKSPFLR 577
Query: 390 NLQNNE 407
+ Q N+
Sbjct: 578 HSQGNK 583
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Frame = +3
Query: 498 KSIDRLASATSTLRN-RKPDVVQCSISAGDLSFDDTIDQID--EEKIDQCIEEAFEEL 662
K +DR+ +T T+ N + ++ + + + +TID D EE +++ IEE F+E+
Sbjct: 166 KVMDRMRGSTMTMDNGMRKELEEALVDELAKNLGETIDNTDITEEDLEKLIEEGFDEV 223
>Z70308-9|CAA94346.2| 402|Caenorhabditis elegans Hypothetical
protein F49E11.7 protein.
Length = 402
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/76 (19%), Positives = 32/76 (42%), Gaps = 2/76 (2%)
Frame = +3
Query: 342 RQLSDKSIIDYNDFIRN--LQNNEANDQQFFFVNGQIISAVSIEEICREIDDIFKSIDRL 515
+ DK + D N+F++ N N +Q + +++ + E +DD I
Sbjct: 18 KMTDDKKMFDINEFLKRHLFVKNWVNYRQQSYTKYELMQLIESVEAALSVDDTLAKISPP 77
Query: 516 ASATSTLRNRKPDVVQ 563
+ + + PD+V+
Sbjct: 78 VTIVGDIHGQYPDLVR 93
>U56964-6|AAB54035.1| 848|Caenorhabditis elegans Hypothetical
protein F52E4.7 protein.
Length = 848
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +3
Query: 477 REIDDIFKS-IDRLASATSTLRNRKP-DVVQCSISAGDLSFDDTIDQIDEEKIDQCIEEA 650
R D+ F++ I+++ A S+ + K + S+ + + SF T +ID E + Q IE
Sbjct: 419 RLFDNFFETLINKVPKANSSEKKSKANESANISLRSDNQSFLSTSSEIDTEVLPQLIETV 478
Query: 651 FEELS 665
ELS
Sbjct: 479 LAELS 483
>D38541-1|BAA07544.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/70 (24%), Positives = 39/70 (55%)
Frame = +3
Query: 486 DDIFKSIDRLASATSTLRNRKPDVVQCSISAGDLSFDDTIDQIDEEKIDQCIEEAFEELS 665
DD+ K+ + L++ATS L ++ V + L+ T+ + + E+ ++ ++ A E+L
Sbjct: 55 DDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLE 114
Query: 666 GSFTSVCQNE 695
+ +V ++E
Sbjct: 115 EATHNVDESE 124
>D38540-1|BAA07543.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/70 (24%), Positives = 39/70 (55%)
Frame = +3
Query: 486 DDIFKSIDRLASATSTLRNRKPDVVQCSISAGDLSFDDTIDQIDEEKIDQCIEEAFEELS 665
DD+ K+ + L++ATS L ++ V + L+ T+ + + E+ ++ ++ A E+L
Sbjct: 55 DDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLE 114
Query: 666 GSFTSVCQNE 695
+ +V ++E
Sbjct: 115 EATHNVDESE 124
>D38539-2|BAA07541.1| 284|Caenorhabditis elegans CeTMII protein.
Length = 284
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/70 (24%), Positives = 39/70 (55%)
Frame = +3
Query: 486 DDIFKSIDRLASATSTLRNRKPDVVQCSISAGDLSFDDTIDQIDEEKIDQCIEEAFEELS 665
DD+ K+ + L++ATS L ++ V + L+ T+ + + E+ ++ ++ A E+L
Sbjct: 55 DDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLE 114
Query: 666 GSFTSVCQNE 695
+ +V ++E
Sbjct: 115 EATHNVDESE 124
>D38539-1|BAA07540.1| 284|Caenorhabditis elegans CeTMI protein.
Length = 284
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/70 (24%), Positives = 39/70 (55%)
Frame = +3
Query: 486 DDIFKSIDRLASATSTLRNRKPDVVQCSISAGDLSFDDTIDQIDEEKIDQCIEEAFEELS 665
DD+ K+ + L++ATS L ++ V + L+ T+ + + E+ ++ ++ A E+L
Sbjct: 55 DDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLE 114
Query: 666 GSFTSVCQNE 695
+ +V ++E
Sbjct: 115 EATHNVDESE 124
>AL132877-4|CAC70112.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1d protein.
Length = 284
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/70 (24%), Positives = 39/70 (55%)
Frame = +3
Query: 486 DDIFKSIDRLASATSTLRNRKPDVVQCSISAGDLSFDDTIDQIDEEKIDQCIEEAFEELS 665
DD+ K+ + L++ATS L ++ V + L+ T+ + + E+ ++ ++ A E+L
Sbjct: 55 DDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLE 114
Query: 666 GSFTSVCQNE 695
+ +V ++E
Sbjct: 115 EATHNVDESE 124
>AL132877-1|CAC70114.1| 284|Caenorhabditis elegans Hypothetical
protein Y105E8B.1a protein.
Length = 284
Score = 29.1 bits (62), Expect = 3.2
Identities = 17/70 (24%), Positives = 39/70 (55%)
Frame = +3
Query: 486 DDIFKSIDRLASATSTLRNRKPDVVQCSISAGDLSFDDTIDQIDEEKIDQCIEEAFEELS 665
DD+ K+ + L++ATS L ++ V + L+ T+ + + E+ ++ ++ A E+L
Sbjct: 55 DDLDKAQEDLSAATSKLEEKEKTVQEAEAEVASLNRRMTLLEEELERAEERLKIATEKLE 114
Query: 666 GSFTSVCQNE 695
+ +V ++E
Sbjct: 115 EATHNVDESE 124
>AC025726-11|AAY43987.1| 294|Caenorhabditis elegans Hypothetical
protein Y71G12B.31 protein.
Length = 294
Score = 29.1 bits (62), Expect = 3.2
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -2
Query: 551 RLTVPQGACSRSQSVNRFEDIVNFSAYFFD*DSGDYL 441
RLT +R + NR+ DIV + + D+GDY+
Sbjct: 26 RLTRSTDRATRHAAANRYSDIVPYDHTLVELDTGDYI 62
>U97010-1|AAB52322.1| 334|Caenorhabditis elegans Hypothetical
protein W08A12.4 protein.
Length = 334
Score = 28.7 bits (61), Expect = 4.3
Identities = 29/111 (26%), Positives = 52/111 (46%), Gaps = 3/111 (2%)
Frame = +3
Query: 168 RNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQL--LKKVRRKVA 341
+NEQ +LEE + ++ DR ++E A+ TM + T S L LK+ K
Sbjct: 66 QNEQEARLEELRRSAKIENDRKNREDELAIETMKFENSQRNTEVYSPYLDSLKEKSLKQD 125
Query: 342 RQLSDKSIIDYNDFI-RNLQNNEANDQQFFFVNGQIISAVSIEEICREIDD 491
Q + I N+ + R L+ +A ++ + Q I EE C+++++
Sbjct: 126 EQFRNNKIRFKNEEMDRTLKYQQAQEEH--TLRRQKIDE-EFEEKCQKLNE 173
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 28.7 bits (61), Expect = 4.3
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +3
Query: 162 LLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAM 257
L++++ W++L E WK V + EED EP +
Sbjct: 3308 LIKDKSWLELSERWKTV-----QDEEDQEPVL 3334
>U40955-5|AAA81753.1| 263|Caenorhabditis elegans Hypothetical
protein F48B9.8 protein.
Length = 263
Score = 28.7 bits (61), Expect = 4.3
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = -2
Query: 503 RFEDIVNFSAYFFD*DSGDYLA-VYKEKLLIVRLVILEIAYKIIIVDNRFIR*LSRDFSS 327
RF+++ + D S + LA ++E L +VR E A + I +++ LSR FS+
Sbjct: 6 RFQEVYGQRSEEKDYGSMENLANAHREYLKVVRRQNREAALRRIDQSMQYVEHLSRSFSA 65
Query: 326 HFFQQ 312
FQQ
Sbjct: 66 ETFQQ 70
>Z70212-1|CAA94162.1| 406|Caenorhabditis elegans Hypothetical
protein R04D3.2 protein.
Length = 406
Score = 28.3 bits (60), Expect = 5.7
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +3
Query: 219 DEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQ 398
+ED E++++P MT S + + FD K R AR+ ++K+ D D ++
Sbjct: 312 NEDNEEDESKPRMTNRRSRNEDEDDFFDDEDDSKPQRNPKARRGNEKN-FDNADSYDEVE 370
Query: 399 NNEAND 416
N++ D
Sbjct: 371 NDDDYD 376
>U80845-4|ABB51197.1| 287|Caenorhabditis elegans Hypothetical
protein C24A8.6 protein.
Length = 287
Score = 28.3 bits (60), Expect = 5.7
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 5/76 (6%)
Frame = +3
Query: 492 IFKSIDRLASATSTLRNRK-----PDVVQCSISAGDLSFDDTIDQIDEEKIDQCIEEAFE 656
I KS R S+ + NRK P++V IS +S + D CI +
Sbjct: 176 IVKSPLRKTSSAGPMNNRKISMQKPEIVIDEISPNRISISAGGNTTFRRSSDDCIRRSSS 235
Query: 657 ELSGSFTSVCQNENSQ 704
E+ G T Q+ N +
Sbjct: 236 EIIGGITLPSQSSNDK 251
>U41547-1|AAA83192.2| 489|Caenorhabditis elegans Glutamate receptor
family (ampa)protein 8 protein.
Length = 489
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 243 NEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQNNEAN 413
N+ + LS + L K + S K+R V R + K I DY ++ + NE N
Sbjct: 323 NDGILPVYLS-IPLVKNSIYSPYFSTKIREMVERGFTQKWIADYRSYVAMQKINECN 378
>U13876-5|AAA21176.2| 449|Caenorhabditis elegans Mammalian bystin
(adhesion protein)related protein 1 protein.
Length = 449
Score = 28.3 bits (60), Expect = 5.7
Identities = 26/106 (24%), Positives = 45/106 (42%)
Frame = +3
Query: 345 QLSDKSIIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSIEEICREIDDIFKSIDRLASA 524
QL + D +R Q + D Q +S+ + E +++ + SA
Sbjct: 22 QLEAGKVAKQRDELREKQKRKREDSQTDEFVPDSLSSKILNEARKQLLEEALERQETESA 81
Query: 525 TSTLRNRKPDVVQCSISAGDLSFDDTIDQIDEEKIDQCIEEAFEEL 662
TS++ R+ + ++GD S DD D +EE+ D E+ EL
Sbjct: 82 TSSVPKRQRGAWLGADASGDKSDDD--DDDNEEEDDNGFEDQVVEL 125
>AF318612-1|AAK01100.1| 406|Caenorhabditis elegans ionotropic
glutamate receptor GLR-8 protein.
Length = 406
Score = 28.3 bits (60), Expect = 5.7
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 243 NEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQNNEAN 413
N+ + LS + L K + S K+R V R + K I DY ++ + NE N
Sbjct: 315 NDGILPVYLS-IPLVKNSIYSPYFSTKIREMVERGFTQKWIADYRSYVAMQKINECN 370
>U50193-9|AAA91253.2| 1332|Caenorhabditis elegans Hypothetical protein
ZK328.7a protein.
Length = 1332
Score = 27.9 bits (59), Expect = 7.5
Identities = 23/94 (24%), Positives = 40/94 (42%), Gaps = 2/94 (2%)
Frame = +1
Query: 157 PSCSVTSNG*NSKKTGSRWTWMKTGQRKTTNQL*R--QCSALWT*RKLHLILRSC*KKCE 330
P C VT +G N + R+ W Q + R +A W + L+ ++ C
Sbjct: 1027 PRC-VTESGYNVCR--GRFEWYTGDQNEALRYYSRTKDSAAGWREKALYYMIDICLNPDN 1083
Query: 331 EKSRDSYLINRLSTIMILYAISRITRRTINSFSL 432
E D + T I+Y +S + ++ +NS +L
Sbjct: 1084 EIIIDENSVENPETTKIIYLVSELWKKLVNSKNL 1117
>Z81074-11|CAB03045.2| 562|Caenorhabditis elegans Hypothetical
protein F32B6.10 protein.
Length = 562
Score = 27.5 bits (58), Expect = 9.9
Identities = 23/94 (24%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Frame = +3
Query: 150 LETILLRN-EQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKV 326
++ + + N E+ KL +WK D+D ++ N+ MLS + + T + Q K
Sbjct: 395 IDEVKINNPEKCSKLASEWKNPDVDVFQSASKNQKGSKMMLS-YEFRLTGKNEEQTGKNE 453
Query: 327 RRKVARQLS-DKSIIDYNDFIRNLQNNEANDQQF 425
+ +K+ Y + L+ N+ N QQF
Sbjct: 454 EKMNEYAYRWEKARERYRQRMLRLKLNDRNKQQF 487
>Z68105-5|CAA92123.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 324 VRRKVARQLSDKSIIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSI-EEICREI 485
+ R++A++ +++ D +R NNE ND+ + V+ ++ + I ++CR +
Sbjct: 529 ISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDPIPTKMCRTV 583
>Z49912-1|CAA90140.1| 588|Caenorhabditis elegans Hypothetical
protein T24F1.2 protein.
Length = 588
Score = 27.5 bits (58), Expect = 9.9
Identities = 24/103 (23%), Positives = 43/103 (41%), Gaps = 3/103 (2%)
Frame = +3
Query: 216 LDEDRTEEDNEPAMTTMLSALDL-KKTTFDSAQLLKKVRRKVARQLSDKSIIDY--NDFI 386
+DEDR E+ E + L + T L++ ++K + L K + + +
Sbjct: 131 IDEDRWNEELEDYRYKLERMYQLCPRCTIQVHGKLEEDKKKYSYLLKVKYKLKHAIGSTL 190
Query: 387 RNLQNNEANDQQFFFVNGQIISAVSIEEICREIDDIFKSIDRL 515
R + NN+ ++FFF G A+ + I +ID L
Sbjct: 191 REVMNNQKRSRRFFFAGGSTCEALHFGCLISSIILFLANIDFL 233
>U88167-3|AAB42224.2| 363|Caenorhabditis elegans Hypothetical
protein D2092.4 protein.
Length = 363
Score = 27.5 bits (58), Expect = 9.9
Identities = 9/23 (39%), Positives = 18/23 (78%)
Frame = +3
Query: 594 DDTIDQIDEEKIDQCIEEAFEEL 662
D++ID +DE++ID+ + +A + L
Sbjct: 74 DNSIDDVDEDRIDEILRDASKNL 96
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 27.5 bits (58), Expect = 9.9
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Frame = +3
Query: 216 LDEDRTEE---DNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFI 386
LD D + D E + ++L+ +D+ K + + +VRR + ++L D SI + +DF
Sbjct: 1466 LDRDAMSQELRDRETRVLSLLNEVDIMKEHLEESD---RVRRSLQQELQD-SISNKDDFG 1521
Query: 387 RNLQNNE 407
+N+ E
Sbjct: 1522 KNVHELE 1528
>U41264-6|AAA82426.1| 437|Caenorhabditis elegans Hypothetical
protein F10E7.10 protein.
Length = 437
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -2
Query: 215 VHRLPVFFEFHPLLVTEQD 159
+ RL +F + HPL VTE D
Sbjct: 92 IRRLCIFVQLHPLFVTESD 110
>AL032657-15|CAA21734.1| 788|Caenorhabditis elegans Hypothetical
protein Y47H9C.5a protein.
Length = 788
Score = 27.5 bits (58), Expect = 9.9
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +3
Query: 144 LDLETILLRNEQWMKLEEDWKP 209
L E + L +E W L EDW+P
Sbjct: 218 LKSEVLHLNSENWKALSEDWEP 239
>AL009066-1|CAA15625.2| 729|Caenorhabditis elegans Hypothetical
protein F13E6.2 protein.
Length = 729
Score = 27.5 bits (58), Expect = 9.9
Identities = 13/55 (23%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Frame = +3
Query: 324 VRRKVARQLSDKSIIDYNDFIRNLQNNEANDQQFFFVNGQIISAVSI-EEICREI 485
+ R++A++ +++ D +R NNE ND+ + V+ ++ + I ++CR +
Sbjct: 529 ISRRIAQKYDGFTMLSMGDILRKKINNEKNDEMWDKVSKKMNNGDPIPTKMCRTV 583
>AF016452-17|AAB66021.1| 1152|Caenorhabditis elegans Hypothetical
protein T05H4.3 protein.
Length = 1152
Score = 27.5 bits (58), Expect = 9.9
Identities = 16/68 (23%), Positives = 31/68 (45%)
Frame = +3
Query: 171 NEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQL 350
NEQ KL + +D+ E+R + EPA T++ + + + + +L + R
Sbjct: 535 NEQLKKLNDMNIKLDVKEERHRRNEEPAETSIEAVSNQQSKIRKVSDVLANISNLTGRAC 594
Query: 351 SDKSIIDY 374
+K D+
Sbjct: 595 DEKLPFDW 602
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,571,653
Number of Sequences: 27780
Number of extensions: 250390
Number of successful extensions: 1025
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1018
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1634564590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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