Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11k18
(705 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g65490.1 68418.m08236 expressed protein similar to unknown pr... 37 0.011
At5g18420.1 68418.m02168 expressed protein non-consensus GC dono... 31 0.98
At1g02580.1 68414.m00209 maternal embryogenesis control protein ... 30 1.7
At5g07940.1 68418.m00920 expressed protein 29 2.3
At1g08550.1 68414.m00948 violaxanthin de-epoxidase precursor, pu... 29 2.3
At5g28960.1 68418.m03583 hypothetical protein 29 4.0
At5g18420.3 68418.m02170 expressed protein non-consensus GC dono... 29 4.0
At5g18420.2 68418.m02169 expressed protein non-consensus GC dono... 29 4.0
At3g02200.2 68416.m00199 proteasome family protein contains Pfam... 29 4.0
At3g02200.1 68416.m00198 proteasome family protein contains Pfam... 29 4.0
At4g21323.1 68417.m03080 subtilase family protein contains simil... 28 5.2
At3g31930.1 68416.m04041 hypothetical protein 28 5.2
At2g35800.1 68415.m04396 mitochondrial substrate carrier family ... 28 6.9
At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearl... 28 6.9
At1g12260.1 68414.m01418 no apical meristem (NAM) family protein... 28 6.9
At4g27280.1 68417.m03915 calcium-binding EF hand family protein ... 27 9.2
At3g61960.1 68416.m06959 protein kinase family protein contains ... 27 9.2
At3g58340.1 68416.m06503 meprin and TRAF homology domain-contain... 27 9.2
>At5g65490.1 68418.m08236 expressed protein similar to unknown
protein (dbj BAA75199.1)
Length = 643
Score = 37.1 bits (82), Expect = 0.011
Identities = 35/164 (21%), Positives = 73/164 (44%), Gaps = 8/164 (4%)
Frame = +3
Query: 192 EEDWKPVDL---DEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKS 362
E+D+K ++ D D D E + ++L K+ F +++ +K + K ++ S
Sbjct: 392 EDDFKGQEVPASDNDSWLYDGEDELNSVLQERQ-KEMEFYNSKKERKNKGKEKQEAGSSS 450
Query: 363 IIDYNDFIRNLQNNEANDQQFF-----FVNGQIISAVSIEEICREIDDIFKSIDRLASAT 527
+ N+F +L + + QQF + ++ +E+ ++D K I+ + +
Sbjct: 451 DANMNNF--DLGDISKSMQQFMHKVSSYKGAEVPENRDFKEVSIDVDRFMKDIESMLGSQ 508
Query: 528 STLRNRKPDVVQCSISAGDLSFDDTIDQIDEEKIDQCIEEAFEE 659
D S+ D+ FDD D + E+ ++ +E+FEE
Sbjct: 509 GRDEQADDDSDGSEGSSMDMDFDDVEDDSEGEESNEDAKESFEE 552
>At5g18420.1 68418.m02168 expressed protein non-consensus GC donor
splice site at exon 1, unknown (C40) protein, Homo
sapiens, EMBL:AF103798
Length = 441
Score = 30.7 bits (66), Expect = 0.98
Identities = 12/43 (27%), Positives = 23/43 (53%)
Frame = +1
Query: 292 LHLILRSC*KKCEEKSRDSYLINRLSTIMILYAISRITRRTIN 420
+ + + +C CE +D Y+ NRL ++ ++ S I + IN
Sbjct: 366 IRMYITNCISSCENAKQDKYMQNRLVRLVCVFLQSLIRNKIIN 408
>At1g02580.1 68414.m00209 maternal embryogenesis control protein /
MEDEA (MEA) nearly identical to MEDEA GB:AAC39446
GI:3089625 from [Arabidopsis thaliana]; contains Pfam
profile PF00856: SET domain
Length = 689
Score = 29.9 bits (64), Expect = 1.7
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Frame = +3
Query: 273 ALDLKKTTFDSAQLLKKVRRKVARQLSDKS-IIDYNDFIRNLQNNEANDQQFF 428
+LDL KTT Q+ KKV RK +R + KS + Y + L+ + + +F+
Sbjct: 392 SLDLNKTTQRHNQVTKKVSRKSSRSVRKKSRLRKYARYPPALKKTTSGEAKFY 444
>At5g07940.1 68418.m00920 expressed protein
Length = 1526
Score = 29.5 bits (63), Expect = 2.3
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Frame = +3
Query: 183 MKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKK---VRR----KVA 341
M+LE PV+ D ++ + ++ ML L ++ TF+ QLLK+ V++ ++
Sbjct: 148 MRLEMGESPVNYDFFGGQQQSNTQLSGMLQPLPRQQMTFNDMQLLKQQVMVKQMHEYQMQ 207
Query: 342 RQLSDKSI--IDYNDFIRNLQNNE-ANDQQFFFVNG 440
+QL + + N RN N A+D Q +NG
Sbjct: 208 QQLQKQQLEARQLNSLNRNAVNGSCASDTQSRMING 243
>At1g08550.1 68414.m00948 violaxanthin de-epoxidase precursor,
putative (AVDE1) similar to EST gb|N37612
Length = 462
Score = 29.5 bits (63), Expect = 2.3
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +3
Query: 540 NRKPDVVQCSISAGDLSFDDTIDQIDE 620
N +PD +C I GDL + +D+ +E
Sbjct: 151 NNRPDETECQIKCGDLFENSVVDEFNE 177
>At5g28960.1 68418.m03583 hypothetical protein
Length = 457
Score = 28.7 bits (61), Expect = 4.0
Identities = 26/86 (30%), Positives = 43/86 (50%)
Frame = +3
Query: 117 VNVRMGTKLLDLETILLRNEQWMKLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTT 296
V+VRMG K ++ L E++M L D +DR E N+ ++T + + K
Sbjct: 322 VHVRMGDKACEMRVAAL--EEYMHL------ADRIKDRFPELNKIWLSTEMKEVVDKSKD 373
Query: 297 FDSAQLLKKVRRKVARQLSDKSIIDY 374
+D + +VARQ+ +KSI +Y
Sbjct: 374 YDHWRFYYT---EVARQVGNKSIAEY 396
>At5g18420.3 68418.m02170 expressed protein non-consensus GC donor
splice site at exon 1, unknown (C40) protein, Homo
sapiens, EMBL:AF103798
Length = 439
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 292 LHLILRSC*KKCEE-KSRDSYLINRLSTIMILYAISRITRRTIN 420
+ + + +C CE K +D Y+ NRL ++ ++ S I + IN
Sbjct: 363 IRMYITNCISSCENAKQQDKYMQNRLVRLVCVFLQSLIRNKIIN 406
>At5g18420.2 68418.m02169 expressed protein non-consensus GC donor
splice site at exon 1, unknown (C40) protein, Homo
sapiens, EMBL:AF103798
Length = 442
Score = 28.7 bits (61), Expect = 4.0
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Frame = +1
Query: 292 LHLILRSC*KKCEE-KSRDSYLINRLSTIMILYAISRITRRTIN 420
+ + + +C CE K +D Y+ NRL ++ ++ S I + IN
Sbjct: 366 IRMYITNCISSCENAKQQDKYMQNRLVRLVCVFLQSLIRNKIIN 409
>At3g02200.2 68416.m00199 proteasome family protein contains Pfam
domain, PF01399: PCI domain
Length = 417
Score = 28.7 bits (61), Expect = 4.0
Identities = 24/93 (25%), Positives = 43/93 (46%)
Frame = +3
Query: 231 TEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQNNEA 410
+E+D E T + S + K+ +++K + KVA+Q SDK+ + + NL N
Sbjct: 72 SEKDLECTYTIICSIVKNAKSPEQVLEMVKAIASKVAQQPSDKASLRLK-ILFNLYNLVD 130
Query: 411 NDQQFFFVNGQIISAVSIEEICREIDDIFKSID 509
+ F V + ++ ++ I FK ID
Sbjct: 131 HPYARFQVYMKALTLAVDGKVTEYIVSSFKKID 163
>At3g02200.1 68416.m00198 proteasome family protein contains Pfam
domain, PF01399: PCI domain
Length = 364
Score = 28.7 bits (61), Expect = 4.0
Identities = 24/93 (25%), Positives = 43/93 (46%)
Frame = +3
Query: 231 TEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQNNEA 410
+E+D E T + S + K+ +++K + KVA+Q SDK+ + + NL N
Sbjct: 72 SEKDLECTYTIICSIVKNAKSPEQVLEMVKAIASKVAQQPSDKASLRLK-ILFNLYNLVD 130
Query: 411 NDQQFFFVNGQIISAVSIEEICREIDDIFKSID 509
+ F V + ++ ++ I FK ID
Sbjct: 131 HPYARFQVYMKALTLAVDGKVTEYIVSSFKKID 163
>At4g21323.1 68417.m03080 subtilase family protein contains
similarity to subtilase; SP1 GI:9957714 from [Oryza
sativa]
Length = 803
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +3
Query: 501 SIDRLASATSTLRNRKPDVVQCSISAGDLSFDDTIDQIDEEKIDQ 635
++DR S TL N K + Q + ++SF D I D +DQ
Sbjct: 399 TLDRSFSTLITLENNKTYLGQSLYTGPEISFTDVICTGDHSNVDQ 443
>At3g31930.1 68416.m04041 hypothetical protein
Length = 164
Score = 28.3 bits (60), Expect = 5.2
Identities = 19/79 (24%), Positives = 34/79 (43%)
Frame = +3
Query: 192 EEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIID 371
++ W +D+ +D E A LD K+ + LK ++ + +D+ I +
Sbjct: 84 DDVWPGIDIVMIEDADDLERASNRSHLILDTKRCSNSKKICLKPIKLEKLNGKNDEEIGN 143
Query: 372 YNDFIRNLQNNEANDQQFF 428
D + NNEAN+ F
Sbjct: 144 KEDEEKTGVNNEANENTNF 162
>At2g35800.1 68415.m04396 mitochondrial substrate carrier family
protein contains INTERPRO:IPR001993 Mitochondrial
substrate carrier family, INTERPRO:IPR002048
calcium-binding EF-hand domain
Length = 823
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/66 (28%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +3
Query: 489 DIFKSI--DRLASATSTLRNRKPDVVQCSISAGDLSFDDTIDQIDEEKIDQCIEEAFEEL 662
D+ KS LASA ST D ++ + A LSF + I ++ E + + +
Sbjct: 540 DVLKSALAGGLASALSTSLMHPIDTIKTRVQASTLSFPEVIAKLPEIGVRGVYRGSIPAI 599
Query: 663 SGSFTS 680
G F+S
Sbjct: 600 LGQFSS 605
>At1g55860.1 68414.m06406 ubiquitin-protein ligase 1 (UPL1) nearly
identical to ubiquitin-protein ligase 1 [Arabidopsis
thaliana] GI:7108521; E3, HECT-domain protein family;
similar to GI:7108521, GB:AAF36454 from [Arabidopsis
thaliana]
Length = 3891
Score = 27.9 bits (59), Expect = 6.9
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 186 KLEEDWKPVDLDEDRTEEDNEPAMTTMLSALDLKKTTFD 302
KLE+ KPVD+ ++ E EP + +++A LK D
Sbjct: 1586 KLEDTEKPVDVPQEEA-EPKEPPVDEVIAASQLKLVQLD 1623
>At1g12260.1 68414.m01418 no apical meristem (NAM) family protein
similar to NAC2 (GI:6456751) [Arabidopsis thaliana];
contains Pfam PF02365 : No apical meristem (NAM) protein
Length = 395
Score = 27.9 bits (59), Expect = 6.9
Identities = 19/75 (25%), Positives = 35/75 (46%)
Frame = +3
Query: 465 EEICREIDDIFKSIDRLASATSTLRNRKPDVVQCSISAGDLSFDDTIDQIDEEKIDQCIE 644
E++ ++ D ++ +D+ + S L N + SI + Q+DEEK +
Sbjct: 319 EQVMDQVTD-WRVLDKFVA--SQLSNEEAATASASIQNNAKDTSNAEYQVDEEKDPKRAS 375
Query: 645 EAFEELSGSFTSVCQ 689
+ EE + S +S CQ
Sbjct: 376 DMGEEYTASTSSSCQ 390
>At4g27280.1 68417.m03915 calcium-binding EF hand family protein
similar to EF-hand Ca2+-binding protein CCD1 [Triticum
aestivum] GI:9255753; contains INTERPRO:IPR002048
calcium-binding EF-hand domain
Length = 130
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = +3
Query: 495 FKSIDRLASATSTLRNRKPDVVQCSISAGDLSFDDTIDQID 617
F+S+ R A+A L + + V+C I GD D ++Q++
Sbjct: 56 FESLRRNAAAVLGLGDLTDEDVRCMIKEGDFDCDGALNQME 96
>At3g61960.1 68416.m06959 protein kinase family protein contains
eukaryotic protein kinase domain, INTERPRO:IPR000719
Length = 626
Score = 27.5 bits (58), Expect = 9.2
Identities = 16/52 (30%), Positives = 26/52 (50%)
Frame = +3
Query: 270 SALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQNNEANDQQF 425
S L++ D L KVR + +++S S ID+ + IR + E D+ F
Sbjct: 32 SGLEVAVKEIDKKLLSPKVRDNLLKEISILSTIDHPNIIRFYEAIETGDRIF 83
>At3g58340.1 68416.m06503 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein similar to
ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 325
Score = 27.5 bits (58), Expect = 9.2
Identities = 20/72 (27%), Positives = 34/72 (47%)
Frame = +3
Query: 264 MLSALDLKKTTFDSAQLLKKVRRKVARQLSDKSIIDYNDFIRNLQNNEANDQQFFFVNGQ 443
++ LD + S+ L+ K + +VA+Q+ K II ND I Q ++ VNG
Sbjct: 136 VIGTLDESEEIIKSSDLINKTQ-EVAQQV--KEIIQPNDLINKTQEVAQQVKESIDVNGF 192
Query: 444 IISAVSIEEICR 479
+ +E + R
Sbjct: 193 QVLPSQVESVRR 204
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,492,532
Number of Sequences: 28952
Number of extensions: 222904
Number of successful extensions: 835
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 808
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 834
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1516419560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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