Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11k14
(690 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17; Eukary... 345 5e-94
UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209; Eukar... 317 2e-85
UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genom... 285 9e-76
UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein; ... 251 1e-65
UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2; Dictyos... 217 2e-55
UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1; Tet... 209 4e-53
UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep: An... 194 1e-48
UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3; ... 192 7e-48
UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168, w... 190 4e-47
UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n... 176 4e-43
UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia asia... 150 3e-35
UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal ... 145 1e-33
UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lambl... 139 5e-32
UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal ... 129 5e-29
UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillar... 122 1e-26
UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4; ... 120 4e-26
UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1; Encepha... 120 4e-26
UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2; Euryar... 92 1e-17
UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6; Euryar... 88 2e-16
UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2; enviro... 84 3e-15
UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1; Methan... 82 1e-14
UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4; Pyroba... 81 2e-14
UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1; Archae... 80 4e-14
UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12; Archa... 77 5e-13
UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2; Halorubrum... 71 4e-11
UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilu... 70 5e-11
UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6; Methan... 69 1e-10
UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1; Metallosph... 68 2e-10
UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4; Haloba... 68 2e-10
UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n... 66 8e-10
UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus... 64 2e-09
UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1; Methanocor... 63 5e-09
UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured... 62 9e-09
UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiell... 60 5e-08
UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S r... 58 2e-07
UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960... 57 5e-07
UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 55 1e-06
UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2; Thermo... 55 2e-06
UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga... 54 2e-06
UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2; Thermoprot... 52 1e-05
UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole geno... 52 1e-05
UniRef50_Q74N14 Cluster: 30S ribosomal protein S3Ae; n=2; Nanoar... 39 0.13
UniRef50_Q87BL9 Cluster: DNA helicase; n=5; Xylella fastidiosa|R... 34 2.9
UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whol... 34 3.8
UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1; ... 33 5.0
UniRef50_Q119K9 Cluster: Putative uncharacterized protein precur... 33 6.6
UniRef50_A0YI31 Cluster: DNA mismatch repair protein; n=5; Cyano... 33 6.6
UniRef50_Q7R086 Cluster: GLP_56_8972_10474; n=1; Giardia lamblia... 33 6.6
UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular org... 33 8.7
UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1; Tet... 33 8.7
>UniRef50_P52813 Cluster: 40S ribosomal protein S3a; n=17;
Eukaryota|Rep: 40S ribosomal protein S3a - Anopheles
gambiae (African malaria mosquito)
Length = 269
Score = 345 bits (849), Expect = 5e-94
Identities = 163/217 (75%), Positives = 187/217 (86%)
Frame = +1
Query: 40 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 219
GK K + KKG KKK+VDPFTRKDWYDVKAP+MF RQVG TLVNRTQGTKIAS+GLK
Sbjct: 4 GKNKGVSKGGKKGSKKKVVDPFTRKDWYDVKAPNMFKNRQVGKTLVNRTQGTKIASDGLK 63
Query: 220 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 399
GRVFEVSLADLQ + DAERSFRKF+L+AE V GR+VL NFHGM LTTDKLR MVKKWQTL
Sbjct: 64 GRVFEVSLADLQNEPDAERSFRKFKLVAESVNGRDVLTNFHGMALTTDKLRSMVKKWQTL 123
Query: 400 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 579
IE ++DVKTTDG++LRVFCIGFT KDS+SQRKTCYAQH+Q++ IR KM II R++T+++
Sbjct: 124 IECSVDVKTTDGFMLRVFCIGFTIKDSMSQRKTCYAQHSQIKNIRAKMTAIIKREITSTD 183
Query: 580 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 690
L+ VV KL+PDSIAKDIEKAC +YPL DV IRKVKV
Sbjct: 184 LKGVVEKLLPDSIAKDIEKACQVVYPLHDVYIRKVKV 220
>UniRef50_P61247 Cluster: 40S ribosomal protein S3a; n=209;
Eukaryota|Rep: 40S ribosomal protein S3a - Homo sapiens
(Human)
Length = 264
Score = 317 bits (778), Expect = 2e-85
Identities = 152/217 (70%), Positives = 178/217 (82%)
Frame = +1
Query: 40 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 219
GK K + KKG KKK+VDPF++KDWYDVKAP+MF+ R +G TLV RTQGTKIAS+GLK
Sbjct: 4 GKNKRLTKGGKKGAKKKVVDPFSKKDWYDVKAPAMFNIRNIGKTLVTRTQGTKIASDGLK 63
Query: 220 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 399
GRVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHGMDLT DK+ MVKKWQT+
Sbjct: 64 GRVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGMDLTRDKMCSMVKKWQTM 120
Query: 400 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 579
IEA++DVKTTDGY+LR+FC+GFT K + RKT YAQH QVR IRKKM EI+TR+V ++
Sbjct: 121 IEAHVDVKTTDGYLLRLFCVGFTKKRNNQIRKTSYAQHQQVRQIRKKMMEIMTREVQTND 180
Query: 580 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 690
L+EVVNKLIPDSI KDIEKAC IYPL DV +RKVK+
Sbjct: 181 LKEVVNKLIPDSIGKDIEKACQSIYPLHDVFVRKVKM 217
>UniRef50_A7NWS5 Cluster: Chromosome chr5 scaffold_2, whole genome
shotgun sequence; n=3; core eudicotyledons|Rep:
Chromosome chr5 scaffold_2, whole genome shotgun sequence
- Vitis vinifera (Grape)
Length = 656
Score = 285 bits (698), Expect = 9e-76
Identities = 140/217 (64%), Positives = 169/217 (77%)
Frame = +1
Query: 40 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 219
GK K + KKG KKK DPF +KDWYD+KAPS+F R VG TLV+RTQGTKIASEGLK
Sbjct: 399 GKNKRISKG-KKGGKKKAADPFAKKDWYDIKAPSVFEVRNVGKTLVSRTQGTKIASEGLK 457
Query: 220 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 399
RVFE+SLADLQAD D +++RK RL AE VQGRNVL NF GMD TTDKLR +V+KWQTL
Sbjct: 458 HRVFEISLADLQADED--QAYRKIRLRAEDVQGRNVLTNFWGMDFTTDKLRSLVRKWQTL 515
Query: 400 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 579
IEA++DVKTTD Y LR+FCI FT K +KTCYAQ +Q+R IR+KM EI+T T+ +
Sbjct: 516 IEAHVDVKTTDNYTLRLFCIAFTKKRVNQNKKTCYAQSSQIRQIRRKMREIMTNMATSCD 575
Query: 580 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 690
L+E+V K IP+SI ++IEKA IYPL++V IRKVK+
Sbjct: 576 LKELVKKFIPESIGREIEKATSSIYPLQNVYIRKVKI 612
>UniRef50_Q5EMY6 Cluster: 40S ribosomal protein S1-like protein;
n=9; Dikarya|Rep: 40S ribosomal protein S1-like protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 256
Score = 251 bits (615), Expect = 1e-65
Identities = 123/217 (56%), Positives = 160/217 (73%)
Frame = +1
Query: 40 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 219
GK K + KKG+KKK DPF RKDWY +KAP+ F+ R VG TLVNR+ G K A++ LK
Sbjct: 4 GKNKRLSKG-KKGLKKKTQDPFARKDWYGIKAPAPFNIRDVGKTLVNRSSGMKNANDALK 62
Query: 220 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 399
GR+FEVSLADLQ D D +FRK +L + VQG+N L NFHG+D T+DKLR +V+KWQ+L
Sbjct: 63 GRIFEVSLADLQKDED--HAFRKIKLRVDEVQGKNCLTNFHGLDFTSDKLRSLVRKWQSL 120
Query: 400 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 579
IEAN+ VKTTD Y+LR+F I T + +KT YA +Q+RAIR+KM EII R+ +
Sbjct: 121 IEANVTVKTTDDYLLRLFAIAVTKRRPNQIKKTTYAASSQIRAIRRKMTEIIQREASTCT 180
Query: 580 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 690
L+++ NKLIP+ I ++IEKA GIYPL++V IRKVK+
Sbjct: 181 LQQLTNKLIPEVIGREIEKATQGIYPLQNVHIRKVKL 217
>UniRef50_Q54ZW5 Cluster: 40S ribosomal protein S3A; n=2;
Dictyostelium discoideum|Rep: 40S ribosomal protein S3A
- Dictyostelium discoideum AX4
Length = 273
Score = 217 bits (531), Expect = 2e-55
Identities = 121/227 (53%), Positives = 158/227 (69%), Gaps = 20/227 (8%)
Frame = +1
Query: 70 KKGVKK--KIVDPFTRKDWYDVKAPSMFSK----RQVGTTLVNRTQGTKIASEGLKGRVF 231
KKG KK K VDPFTRK+WY V+AP+ F K +VG T VNRTQGTK+AS+GLKGRV+
Sbjct: 6 KKGSKKGGKKVDPFTRKEWYVVRAPTQFFKSPADNKVGFTPVNRTQGTKLASDGLKGRVY 65
Query: 232 EVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEAN 411
EVSLAD++ D + FRK +L AE V+GRNVL NF+GMDLT+DKLR ++ KW TLIE
Sbjct: 66 EVSLADMK--DDESQVFRKIKLRAEEVEGRNVLTNFYGMDLTSDKLRSLIHKWSTLIECF 123
Query: 412 IDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREV 591
+DVKTTDGY LRVF I FT K ++KT YA+ ++V+AIRKKM +I+T V++++L+ V
Sbjct: 124 VDVKTTDGYFLRVFAICFTKKGESQKKKTSYAKTSRVKAIRKKMVDILTETVSSNDLKTV 183
Query: 592 VNKLI--------------PDSIAKDIEKACHGIYPLRDVCIRKVKV 690
V+ LI ++A+ I I+P+ +V IRKVKV
Sbjct: 184 VDYLIGVSLNGVTTNASGFAPTLAEKIRIEGSSIFPIHNVFIRKVKV 230
>UniRef50_Q23DE3 Cluster: Ribosomal S3Ae family protein; n=1;
Tetrahymena thermophila SB210|Rep: Ribosomal S3Ae family
protein - Tetrahymena thermophila SB210
Length = 265
Score = 209 bits (511), Expect = 4e-53
Identities = 100/210 (47%), Positives = 141/210 (67%), Gaps = 3/210 (1%)
Frame = +1
Query: 70 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 249
KKG KK+ +DP +RK+WYD +AP FS + G TLV ++ G +IASE +KGRV E +LAD
Sbjct: 15 KKGAKKRTIDPLSRKEWYDFRAPIPFSSKSFGKTLVTKSSGNRIASEEIKGRVVESTLAD 74
Query: 250 LQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTT 429
L+ D ++++RK +L+ + V GRN +F+G+D+T D+L M++KWQTLIEA +D KT
Sbjct: 75 LK-DNSNDKAWRKVKLVIDEVDGRNAKTSFYGLDITRDRLCSMIRKWQTLIEARVDCKTN 133
Query: 430 DGYVLRVFCIGFTNKDSL---SQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 600
DGY++RVF + FT K S S TCYA+ +QVRAIR+K+ IT + + E
Sbjct: 134 DGYIIRVFTLAFTKKTSAGKQSSTSTCYAKSSQVRAIRRKINTFITNEAAKLGIAEFSKN 193
Query: 601 LIPDSIAKDIEKACHGIYPLRDVCIRKVKV 690
LI + K IEK I+PL+++ IRKVKV
Sbjct: 194 LIGEDYTKKIEKETKNIFPLQNITIRKVKV 223
>UniRef50_Q9U4U0 Cluster: Antigen; n=10; Trypanosomatidae|Rep:
Antigen - Leishmania major
Length = 264
Score = 194 bits (474), Expect = 1e-48
Identities = 88/217 (40%), Positives = 141/217 (64%)
Frame = +1
Query: 40 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK 219
GK K + K+G + K + RK+WYDV AP+ F KRQ T+ N+TQGT+IA++ L+
Sbjct: 4 GKNKRISKGGKRGKRGKAQETMARKEWYDVVAPANFEKRQFAKTICNKTQGTRIAADVLR 63
Query: 220 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 399
GRVFE +LADL E ++RK R + VQGRN+L FH M++TTDK+ +++KW T
Sbjct: 64 GRVFEANLADLNQSAGEEEAYRKVRFTVQEVQGRNLLTQFHSMEVTTDKMANLLRKWCTT 123
Query: 400 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 579
+E ++VKT DGY +R+F + FT + Q + CYA+ V+ +R ++ ++I R ++ +
Sbjct: 124 METTVEVKTADGYTMRLFVVAFTKPQANQQSRNCYAKQRLVKWLRMRITKMIKRRLSKVQ 183
Query: 580 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 690
++E V+ L + ++ + + C+ I PLR++ IRKV+V
Sbjct: 184 IKEAVSLLTRNVLSDALVRRCNPILPLRELRIRKVRV 220
>UniRef50_UPI000049A095 Cluster: 40S ribosomal protein S3a; n=3;
Entamoeba histolytica HM-1:IMSS|Rep: 40S ribosomal
protein S3a - Entamoeba histolytica HM-1:IMSS
Length = 257
Score = 192 bits (468), Expect = 7e-48
Identities = 97/199 (48%), Positives = 136/199 (68%), Gaps = 1/199 (0%)
Frame = +1
Query: 37 SGKIKACRRA-VKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEG 213
+GK K + VKKG K+KI +PF++K+WY+VK P F +R VG +VN+T GT+IASE
Sbjct: 3 TGKNKKYKAGNVKKGSKRKIAEPFSKKEWYNVKVPKNFKRRTVGQIVVNKTAGTRIASEQ 62
Query: 214 LKGRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQ 393
LKGRV EV+LADL + KF+ E V G++ L FHG+ LTTDKLR +VKKW
Sbjct: 63 LKGRVVEVNLADLMENEKFGAYNYKFK--CEDVNGKDCLMIFHGLKLTTDKLRSIVKKWC 120
Query: 394 TLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTN 573
TLIE ++DVKTTDG+++R+FCIGFT++ S +KT YA+ Q++ IRK M +IT++ +
Sbjct: 121 TLIETSVDVKTTDGHLIRIFCIGFTSRKSNQIKKTSYAKSAQIKKIRKIMNNLITKEAAS 180
Query: 574 SELREVVNKLIPDSIAKDI 630
EL + V+ L + K +
Sbjct: 181 RELTQFVDYLKKTNFQKKL 199
>UniRef50_A0CCR3 Cluster: Chromosome undetermined scaffold_168,
whole genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_168,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 291
Score = 190 bits (462), Expect = 4e-47
Identities = 89/207 (42%), Positives = 141/207 (68%)
Frame = +1
Query: 70 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 249
KKG +KK +DP RK+W+++ AP F+ G T +N++ GT +A+E +KGRV E SLAD
Sbjct: 12 KKG-QKKTIDPLARKEWFELTAPVPFAAGGFGYTCINKSAGTVVATEAIKGRVVEASLAD 70
Query: 250 LQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTT 429
LQ +D + ++RK +LI + V+G +F+G+D T DK+ M+KK QTLIE ++ ++
Sbjct: 71 LQGQSD-QMAWRKVKLIIDDVEGTRCRTSFYGLDSTKDKIFGMIKKRQTLIETQVEARSQ 129
Query: 430 DGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP 609
DGY+LR+F I FT QRKT YAQ +Q++ IRKK+ EI+ ++V+ + +++
Sbjct: 130 DGYILRIFVIAFTKSIKNQQRKTTYAQRSQIKDIRKKIVEIVLKEVSKKSITQLLGFFNQ 189
Query: 610 DSIAKDIEKACHGIYPLRDVCIRKVKV 690
+S+AK+I KA I+PL+++ +RKVK+
Sbjct: 190 ESLAKEIGKATRTIFPLQNITLRKVKL 216
>UniRef50_UPI00005042B8 Cluster: UPI00005042B8 related cluster; n=1;
Rattus norvegicus|Rep: UPI00005042B8 UniRef100 entry -
Rattus norvegicus
Length = 237
Score = 176 bits (429), Expect = 4e-43
Identities = 99/206 (48%), Positives = 134/206 (65%), Gaps = 1/206 (0%)
Frame = +1
Query: 76 GVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 255
G ++K +KD YDVKA +MF+ R +G T V R Q TK+ S GL G VFE SLA LQ
Sbjct: 1 GARRKTARRAKKKDRYDVKALTMFNVRNIGKTQVLRKQETKMVSVGLNGLVFEASLASLQ 60
Query: 256 ADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDG 435
D + RKF+LI E ++G+N L N +GMDLT DK V KWQ ++EA+ DVKT D
Sbjct: 61 ND---KVVVRKFKLITEDMRGKNGLTNSYGMDLTWDKRCNKVIKWQ-MVEAHADVKTADY 116
Query: 436 YVLRVFCIGF-TNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPD 612
Y+L +FC+G+ TN + R+ AQ+ QV I +I+ D ++L+EV+NKL+PD
Sbjct: 117 YLLCLFCVGYTTNVTTRYARQLVCAQYQQVHQIWLITIQIM--DQRRTDLKEVLNKLVPD 174
Query: 613 SIAKDIEKACHGIYPLRDVCIRKVKV 690
++ KD+EKAC IYPL DV +RKVK+
Sbjct: 175 NVGKDVEKACQFIYPLHDVFVRKVKI 200
>UniRef50_A3F4R3 Cluster: Ribosomal protein S3a; n=1; Taenia
asiatica|Rep: Ribosomal protein S3a - Taenia asiatica
(Asian tapeworm)
Length = 183
Score = 150 bits (364), Expect = 3e-35
Identities = 73/137 (53%), Positives = 93/137 (67%)
Frame = +1
Query: 280 FRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCI 459
FRKF+L E VQGR+ L NFHGMDLT DKL MV KWQ+ IEA++DVKTTDGY LR F I
Sbjct: 7 FRKFKLQVEDVQGRHCLTNFHGMDLTHDKLCGMVLKWQSTIEAHVDVKTTDGYTLRFFVI 66
Query: 460 GFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKA 639
FT K Q+ YAQ T+++ +R ++ E++ R+V +L+ VV KLIPDSI +D
Sbjct: 67 AFTKKQE-DQKSHAYAQTTRIKKLRAEIVEVVQREVARCDLKSVVQKLIPDSIGQDAMNE 125
Query: 640 CHGIYPLRDVCIRKVKV 690
I+PL +RKVKV
Sbjct: 126 ASSIFPLSGALVRKVKV 142
>UniRef50_UPI000041A636 Cluster: PREDICTED: similar to ribosomal
protein S3a isoform 5; n=18; Eutheria|Rep: PREDICTED:
similar to ribosomal protein S3a isoform 5 - Homo
sapiens
Length = 211
Score = 145 bits (351), Expect = 1e-33
Identities = 76/130 (58%), Positives = 94/130 (72%)
Frame = +1
Query: 43 KIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKG 222
K K + KKG KKK+VDPF++KDWYDV AP+MF+ R +G TLV RTQGTKIAS+ G
Sbjct: 5 KNKRLTKGGKKGAKKKVVDPFSKKDWYDVNAPAMFNIRNIGKTLVTRTQGTKIASD---G 61
Query: 223 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 402
RVFEVSLADLQ D E +FRKF+LI E VQG+N L NFHG+DLT+DK+ ++K I
Sbjct: 62 RVFEVSLADLQND---EVAFRKFKLITEDVQGKNCLTNFHGVDLTSDKITSQIRKKMMEI 118
Query: 403 EANIDVKTTD 432
+V+T D
Sbjct: 119 MTR-EVQTND 127
Score = 84.6 bits (200), Expect = 2e-15
Identities = 38/54 (70%), Positives = 46/54 (85%)
Frame = +1
Query: 529 IRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 690
IRKKM EI+TR+V ++L+EVVNKLIPDSI KD+EKAC IYPL DV +RKVK+
Sbjct: 111 IRKKMMEIMTREVQTNDLKEVVNKLIPDSIGKDVEKACQSIYPLHDVFVRKVKM 164
>UniRef50_Q7QT21 Cluster: GLP_675_17761_17015; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_675_17761_17015 - Giardia lamblia
ATCC 50803
Length = 248
Score = 139 bits (337), Expect = 5e-32
Identities = 73/207 (35%), Positives = 114/207 (55%)
Frame = +1
Query: 70 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 249
KK ++K DP+ +K+WY V AP+ F R +G T V +T G ++A++ + RV+EV+L D
Sbjct: 11 KKITQRKNPDPYLKKEWYPVIAPAHFKSRHIGQTPVTKTAGLRVATDVINHRVYEVNLGD 70
Query: 250 LQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTT 429
L + KF L + V L NFHGMD+T K + +K I+ +D+ TT
Sbjct: 71 LNPGAEDLNGNTKFYLQTQLVSDGKCLTNFHGMDITRHKYGSLFRKGCDCIDVFMDIPTT 130
Query: 430 DGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP 609
DGY+LRVF I FT++ +RK C+ + +R +R + E + ++ + +V KL
Sbjct: 131 DGYLLRVFVIAFTDRFRFQRRKNCHVKGRVIRMMRAGIYETLHNELGKVSIPVLVTKLSN 190
Query: 610 DSIAKDIEKACHGIYPLRDVCIRKVKV 690
+ + +A I RDV IR+VKV
Sbjct: 191 FEVNAKLTEALQKITMCRDVMIRRVKV 217
>UniRef50_UPI00015608D3 Cluster: PREDICTED: similar to ribosomal
protein S3a; n=1; Equus caballus|Rep: PREDICTED: similar
to ribosomal protein S3a - Equus caballus
Length = 153
Score = 129 bits (312), Expect = 5e-29
Identities = 64/101 (63%), Positives = 77/101 (76%)
Frame = +1
Query: 61 RAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVS 240
R+ KKG KKK VD ++KDWYD+KAP+MF+ R +G TLV RTQGTKIAS+GLKG VFE+S
Sbjct: 11 RSSKKGAKKKAVDQISKKDWYDMKAPAMFNIRNIGKTLVTRTQGTKIASDGLKGGVFEMS 70
Query: 241 LADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTD 363
LADLQ D E +FRKF+LI E VQG+ L NF M L+ D
Sbjct: 71 LADLQND---EVAFRKFKLITEDVQGKRCLINFRSMGLSCD 108
>UniRef50_Q9AW90 Cluster: 40S ribosomal Protein S3a; n=1; Guillardia
theta|Rep: 40S ribosomal Protein S3a - Guillardia theta
(Cryptomonas phi)
Length = 219
Score = 122 bits (293), Expect = 1e-26
Identities = 64/202 (31%), Positives = 111/202 (54%)
Frame = +1
Query: 85 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 264
KK D +R++ V AP +F + +G TL+ + + + ++++VSLAD+
Sbjct: 15 KKNQDVNSRQELIKVYAPDIFDSKLIGKTLIKKRNPAD-ENSSVDNKIYQVSLADILGKE 73
Query: 265 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 444
E S F + + FHG+ LT DK+ ++KKW TLIE ++ KT DGY L
Sbjct: 74 --EFSSINFNFKSLKIFNNECFTKFHGLTLTRDKICSLIKKWHTLIEVEVNFKTKDGYFL 131
Query: 445 RVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAK 624
++F I + K + KT Y +Q RA+R+++ +II ++ N ++++ ++++ I +
Sbjct: 132 KLFLIAQSKKPKNMKSKTVYINSSQKRALRRRITDIIIKEGINMDIKDFIHRIYSLKIYE 191
Query: 625 DIEKACHGIYPLRDVCIRKVKV 690
IE C I+P+ V IRK+KV
Sbjct: 192 KIEINCSKIFPIHQVNIRKIKV 213
>UniRef50_A2FDS0 Cluster: Ribosomal protein S3Ae, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein S3Ae,
putative - Trichomonas vaginalis G3
Length = 247
Score = 120 bits (288), Expect = 4e-26
Identities = 70/214 (32%), Positives = 114/214 (53%), Gaps = 1/214 (0%)
Frame = +1
Query: 52 ACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFS-KRQVGTTLVNRTQGTKIASEGLKGRV 228
A ++ K KK D F +K+W V P+ F+ KR +G T+ N+ ++ + + RV
Sbjct: 3 ASKQQRPKTSKKIKQDSFIKKEWRHVLVPAYFTGKRDIGVTVSNKCARGRVPMDYVNNRV 62
Query: 229 FEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEA 408
+E+S AD+ D +R IA G V F GM LT DKL +++K++T+I+A
Sbjct: 63 WELSHADMVNDLSHAYRLFSWRSIAA---GSEVYTQFAGMRLTHDKLDSIMRKYRTMIDA 119
Query: 409 NIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELRE 588
++D KT DG++LR+F IGFT K + S + YA + R +R M + +T + + +
Sbjct: 120 SVDAKTADGFILRLFTIGFTKKLANSHKNHTYANSHKARQVRDVMIKALTDACEANGVEQ 179
Query: 589 VVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 690
+ + + I +I + C I + V I KVKV
Sbjct: 180 LCKDFVDEKIENEIVEKCKQICQIESVYITKVKV 213
>UniRef50_Q8SS05 Cluster: 40S RIBOSOMAL PROTEIN S3A; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN S3A
- Encephalitozoon cuniculi
Length = 189
Score = 120 bits (288), Expect = 4e-26
Identities = 59/156 (37%), Positives = 96/156 (61%)
Frame = +1
Query: 220 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 399
GR ++V+ ADL + D RKF ++G + F GM+LT+DK + M+KKW TL
Sbjct: 15 GRRYDVNQADLTGNNDV--GHRKFIFKIGDIKGSECVGFFDGMELTSDKHKAMIKKWHTL 72
Query: 400 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 579
IEA D+ DG V RVF +G T + +KTCY +H+ + IRK M ++I +++ +
Sbjct: 73 IEAQKDIVAKDGSVFRVFVMGVTRRHPGYVKKTCYVKHSDEKKIRKIMFDVIEEELSGCD 132
Query: 580 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVK 687
+++++ KL +++ K IE+ I+PL++ C+RKVK
Sbjct: 133 VQKIMKKLANETVGKRIEELGSEIFPLQNCCVRKVK 168
>UniRef50_Q0W2K9 Cluster: 30S ribosomal protein S3AE; n=2;
Euryarchaeota|Rep: 30S ribosomal protein S3AE -
Uncultured methanogenic archaeon RC-I
Length = 225
Score = 91.9 bits (218), Expect = 1e-17
Identities = 65/198 (32%), Positives = 101/198 (51%)
Frame = +1
Query: 88 KIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 267
K VD F K+WY V AP+ F++ +G TL + G I GRV E +L D+ D
Sbjct: 7 KKVDAFRAKNWYQVIAPAEFNRANIGETLAD-DPGKMI------GRVMESTLGDVTGDWT 59
Query: 268 AERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLR 447
+ FR+ E + G + +F G +LT D +R +VK+ + I+AN+ V T DG+ +R
Sbjct: 60 KQNIKMIFRI--EEIGGNSAYTSFLGHELTRDYMRSLVKRRTSKIDANVVVTTKDGFKVR 117
Query: 448 VFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKD 627
V I T K A+ +Q+ +IR+ M ++ + E +N+++ +A +
Sbjct: 118 VKPIVLTVK---------RARTSQIESIRQIMINVVNKRGAELGFTEFINEVVTGKVASE 168
Query: 628 IEKACHGIYPLRDVCIRK 681
I K IYPLR V I K
Sbjct: 169 IYKNTKNIYPLRRVEIGK 186
>UniRef50_Q8Q0F2 Cluster: 30S ribosomal protein S3Ae; n=6;
Euryarchaeota|Rep: 30S ribosomal protein S3Ae -
Methanosarcina mazei (Methanosarcina frisia)
Length = 204
Score = 87.8 bits (208), Expect = 2e-16
Identities = 64/207 (30%), Positives = 110/207 (53%)
Frame = +1
Query: 70 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 249
+K V++K+ D + K+WY+++AP+ ++ VGTT+ L GR E ++ +
Sbjct: 3 RKKVQRKL-DGWKSKEWYNIEAPAYLNRVIVGTTMAGDPSL-------LVGRNVETTVGE 54
Query: 250 LQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTT 429
L D ++ K L V G + G +LTTD +R +VK+ + I+AN+DV+T
Sbjct: 55 LT--NDMTKNNTKVILRVNNVVGDIATTDLMGHELTTDYVRSIVKRQTSRIDANVDVRTK 112
Query: 430 DGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP 609
DG+V+RV FT K A+ +Q++AIR+ M +I+ + + ++ + + I
Sbjct: 113 DGFVIRVKPTCFTIK---------RARSSQMQAIREMMVDIVKKRASETDFETFMQEAIL 163
Query: 610 DSIAKDIEKACHGIYPLRDVCIRKVKV 690
++ I + IYPLR V IRK +V
Sbjct: 164 GRLSAAIYRQAKFIYPLRRVEIRKTQV 190
>UniRef50_Q3SAA8 Cluster: SSU ribosomal protein S3AE; n=2;
environmental samples|Rep: SSU ribosomal protein S3AE -
uncultured euryarchaeote Alv-FOS1
Length = 227
Score = 84.2 bits (199), Expect = 3e-15
Identities = 61/206 (29%), Positives = 99/206 (48%)
Frame = +1
Query: 73 KGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADL 252
+ +K+ D + K WY + P FS +++G T + K+ GRV E +L DL
Sbjct: 7 RAASRKVRDKWRSKVWYTIITPETFSSKEIGMTPADDPD--KVI-----GRVAESTLYDL 59
Query: 253 QADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTD 432
+ F++ VQG N F G D+TTD +R M+++ ++ I+ +V+T+D
Sbjct: 60 SGNFKKMHVKLYFKI--NRVQGTNAYTRFIGHDMTTDYIRRMIRRRRSRIDMIFNVETSD 117
Query: 433 GYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPD 612
GY +RV + ++ S KT IRKK+ E +T E V +I D
Sbjct: 118 GYRMRVKVLTVPDRRIKSSIKT---------EIRKKIQEYLTEKARAMTFSEYVKYIISD 168
Query: 613 SIAKDIEKACHGIYPLRDVCIRKVKV 690
+++ K IYP+R + IRK +V
Sbjct: 169 DAPRELSKELKVIYPVRRIEIRKSEV 194
>UniRef50_Q8TVD1 Cluster: 30S ribosomal protein S3Ae; n=1;
Methanopyrus kandleri|Rep: 30S ribosomal protein S3Ae -
Methanopyrus kandleri
Length = 211
Score = 82.2 bits (194), Expect = 1e-14
Identities = 64/202 (31%), Positives = 97/202 (48%), Gaps = 4/202 (1%)
Frame = +1
Query: 97 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAER 276
D + K WY + AP MF +VG T + E + GRV E +L D+ D
Sbjct: 4 DKWKDKVWYTILAPDMFDNVEVGETPADDP-------EKVIGRVLETTLGDVLDDITKHH 56
Query: 277 SFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFC 456
FR+ V+G F G L D +R +V++ + I+ IDV T DGY +RV
Sbjct: 57 IKVFFRIYD--VEGTTAYSKFEGHRLMRDYVRSLVRRGTSRIDGVIDVVTKDGYKVRVAG 114
Query: 457 IGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLI----PDSIAK 624
+ FT T A+ +Q RAIRK+M ++I + + E + + + +SI +
Sbjct: 115 LAFT---------TRRAKTSQQRAIRKEMFKVIEENAKECDFDEFIRRCLSISEEESIPE 165
Query: 625 DIEKACHGIYPLRDVCIRKVKV 690
I++A IYP+R IRK +V
Sbjct: 166 QIKEAGRKIYPIRQAEIRKTEV 187
>UniRef50_Q8ZT21 Cluster: 30S ribosomal protein S3Ae; n=4;
Pyrobaculum|Rep: 30S ribosomal protein S3Ae -
Pyrobaculum aerophilum
Length = 221
Score = 81.4 bits (192), Expect = 2e-14
Identities = 63/216 (29%), Positives = 101/216 (46%)
Frame = +1
Query: 43 KIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKG 222
K KA + K + K+ DP+ K W+ V APS + N Q L
Sbjct: 4 KQKAVAKQEKVAISKR--DPWALKKWFSVYAPSYLGGVFLAEVPANEAQK-------LLM 54
Query: 223 RVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLI 402
R EVSL D+ D KF++ V+G L F G++LT D +R +V+K + +
Sbjct: 55 RTLEVSLYDITKDISHLPIKLKFQI--HRVEGLKALTRFKGLELTRDYIRSLVRKGTSKV 112
Query: 403 EANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSEL 582
A +VKT DG V+R+ +G T + +K+ A+RKKM E + + +
Sbjct: 113 TAITEVKTKDGMVMRIAVLGITTHRIGTAQKS---------AMRKKMIETLVKKAAELDS 163
Query: 583 REVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 690
+ + +++ ++A D+ I P+R V I K+KV
Sbjct: 164 GQFLKEILEGTLAADLFIVAKKIAPMRKVEIAKIKV 199
>UniRef50_O27964 Cluster: 30S ribosomal protein S3Ae; n=1;
Archaeoglobus fulgidus|Rep: 30S ribosomal protein S3Ae -
Archaeoglobus fulgidus
Length = 211
Score = 80.2 bits (189), Expect = 4e-14
Identities = 57/201 (28%), Positives = 98/201 (48%)
Frame = +1
Query: 88 KIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTD 267
++ D +T K W+ + AP F ++G T + +K+ GR E +LA+L D
Sbjct: 9 RVKDKWTLKKWFTLIAPEYFGMAELGETPAD--DASKVV-----GRTVETTLAELTNDYS 61
Query: 268 AERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLR 447
+ +++K V G N F +LT + L + ++ + IE +DV T DGY LR
Sbjct: 62 NQNTYKKLIFKVYRVAGDNAYTKFWRFELTREYLNSLTRRRTSKIEDIVDVTTADGYKLR 121
Query: 448 VFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKD 627
V + FT + + KT +Q RAIR M +I+ ++ + + + + + +
Sbjct: 122 VKSVVFT----VRRCKT-----SQKRAIRAIMRQIVVEKASSLNFVQFLQECVLGKVPAE 172
Query: 628 IEKACHGIYPLRDVCIRKVKV 690
I K IYP+R V IRK+++
Sbjct: 173 IYKNAKKIYPIRRVEIRKIEL 193
>UniRef50_Q9YCV8 Cluster: 30S ribosomal protein S3Ae; n=12;
Archaea|Rep: 30S ribosomal protein S3Ae - Aeropyrum
pernix
Length = 214
Score = 76.6 bits (180), Expect = 5e-13
Identities = 63/208 (30%), Positives = 100/208 (48%), Gaps = 4/208 (1%)
Frame = +1
Query: 79 VKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQA 258
V+ I D + K W+ V AP +F + +GTT + + L GRV E +L D+
Sbjct: 2 VRGGIRDTWRLKKWFKVVAPPLFGETVLGTTPADDP-------DKLIGRVMETTLFDITG 54
Query: 259 DTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGY 438
D F+++ V+G F G +L D +R + ++ + + +V T DGY
Sbjct: 55 DYSYVHVKMYFQVVR--VEGDTAYTRFKGHELLRDYIRGLTRRKSSKVTGIFNVWTKDGY 112
Query: 439 VLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLI---- 606
LRV + FT R+ C + +Q AIRK M EI+ + S L E++ ++
Sbjct: 113 GLRVTAMAFT-------RQRC--KTSQKSAIRKVMQEIVEQKARESTLDELIQLMVFSDH 163
Query: 607 PDSIAKDIEKACHGIYPLRDVCIRKVKV 690
S+A I+++ IYPLR V I K K+
Sbjct: 164 EGSLAYLIDESARKIYPLRKVEIAKSKL 191
>UniRef50_A7D401 Cluster: Ribosomal protein S3Ae; n=2;
Halorubrum|Rep: Ribosomal protein S3Ae - Halorubrum
lacusprofundi ATCC 49239
Length = 215
Score = 70.5 bits (165), Expect = 4e-11
Identities = 53/192 (27%), Positives = 89/192 (46%)
Frame = +1
Query: 109 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRK 288
+K WY V AP F ++++G TL + + GR +L +L D+ A +
Sbjct: 12 QKRWYSVLAPEQFDRQELGETLAEEP-------DQVVGRTITTTLGELTGDSGANNTKLT 64
Query: 289 FRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 468
F++ V F +LT D LR +V++ + +EA+I V TTD Y +RV + T
Sbjct: 65 FKITD--VGSDTAYTEFIKYELTRDYLRSLVRRGASKVEASITVLTTDDYRIRVQPVALT 122
Query: 469 NKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHG 648
K A +Q +AIR+ M + + + V+ ++ +++ I
Sbjct: 123 TKK---------ADRSQEKAIRRVMIDKVHAAAEDRTFESFVDAIVEGNLSSAIYGDAKL 173
Query: 649 IYPLRDVCIRKV 684
IYPLR V I+K+
Sbjct: 174 IYPLRRVEIQKL 185
>UniRef50_A1RXX5 Cluster: Ribosomal protein S3Ae; n=1; Thermofilum
pendens Hrk 5|Rep: Ribosomal protein S3Ae - Thermofilum
pendens (strain Hrk 5)
Length = 207
Score = 70.1 bits (164), Expect = 5e-11
Identities = 54/203 (26%), Positives = 98/203 (48%)
Frame = +1
Query: 82 KKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 261
+ K D ++ K W V AP F +G L+ + K GR EVS D+ D
Sbjct: 4 RAKTKDKWSMKKWIKVLAPKAFGFANLG--LIPADEPEKAL-----GRTVEVSFYDITKD 56
Query: 262 TDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYV 441
KF+++ V L M++T D +R +V++ + ++A +DV+T DG
Sbjct: 57 VSQLHIKLKFQIVK--VDDGIALTQLKLMEMTRDYIRSLVRRGTSRVDAILDVQTKDGVK 114
Query: 442 LRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIA 621
+RV + T +S+ KT +Q +AIR+ M +II+ + + + + + ++A
Sbjct: 115 MRVMALAVT----VSRIKT-----SQKKAIRRIMFDIISEKAASLDFDTFIQQAVIGTMA 165
Query: 622 KDIEKACHGIYPLRDVCIRKVKV 690
+++ IYP++ V + K+KV
Sbjct: 166 TEMQMQAKKIYPIKKVEVYKIKV 188
>UniRef50_Q6LZG0 Cluster: 30S ribosomal protein S3Ae; n=6;
Methanococcales|Rep: 30S ribosomal protein S3Ae -
Methanococcus maripaludis
Length = 225
Score = 68.5 bits (160), Expect = 1e-10
Identities = 55/203 (27%), Positives = 90/203 (44%)
Frame = +1
Query: 82 KKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 261
K+ D + K WYD+ P F +G T N L GR+ E+SL DL +
Sbjct: 12 KRVAKDTWKSKVWYDIYTPQSFGGDVIGQTPANDPAN-------LIGRISEISLRDLTNE 64
Query: 262 TDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYV 441
+ F++ + V G N F G D T + L+ V++ ++ I A ++V+T DG+
Sbjct: 65 HSKHMTRMYFKV--DGVSGNNATSQFVGHDTTREYLKSQVRRRRSKINAIVEVRTKDGFK 122
Query: 442 LRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIA 621
+RV + T + KT IR +M +II + E V+ ++ +
Sbjct: 123 VRVKALVLTAVRARDHHKT---------EIRVRMEQIIKEMAKETPFAEFVHAMLMGGLG 173
Query: 622 KDIEKACHGIYPLRDVCIRKVKV 690
I C ++PL+ V I K +V
Sbjct: 174 SKIYGDCKKMFPLKRVEIFKSEV 196
>UniRef50_A4YCU2 Cluster: Ribosomal protein S3Ae; n=1;
Metallosphaera sedula DSM 5348|Rep: Ribosomal protein
S3Ae - Metallosphaera sedula DSM 5348
Length = 216
Score = 68.1 bits (159), Expect = 2e-10
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 1/211 (0%)
Frame = +1
Query: 61 RAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVS 240
R+ KG + D + K W+ + +P +F + +G+T T GR E +
Sbjct: 4 RSGAKGSAGALKDKWKMKKWFSIYSPKVFGEVSLGSTPAFDVSQTM-------GRKVETT 56
Query: 241 LADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDV 420
L DL D F+++ +G + F G +L+ D +R +V++ + I +D+
Sbjct: 57 LYDLTGDFSTVYVHLYFKVVRN--EGERLFTEFAGHELSRDYVRSLVRRKSSKINKVVDI 114
Query: 421 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQH-TQVRAIRKKMCEIITRDVTNSELREVVN 597
T DG+ LRV + T Y H Q IRK M +++ + E V
Sbjct: 115 TTKDGFTLRVKTLAL----------TAYRVHREQATTIRKIMEDVVKKTAEGKTFDEFVQ 164
Query: 598 KLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 690
++I ++A +I I PLR I K KV
Sbjct: 165 EMIFGNLANNIFNEAKKIAPLRKAEIEKSKV 195
>UniRef50_Q5V296 Cluster: 30S ribosomal protein S3Ae; n=4;
Halobacteriaceae|Rep: 30S ribosomal protein S3Ae -
Haloarcula marismortui (Halobacterium marismortui)
Length = 213
Score = 68.1 bits (159), Expect = 2e-10
Identities = 49/191 (25%), Positives = 87/191 (45%)
Frame = +1
Query: 109 RKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRK 288
+K WY V+AP F + +G T + + GR E +L +L D +
Sbjct: 12 QKRWYTVQAPEQFDREVLGKTPAEEP-------DKVLGRTIETTLGELTNDASENNTKLT 64
Query: 289 FRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 468
F++ V + F +LT D LR +V++ + +EA I V TTD Y +++ + T
Sbjct: 65 FKI--NEVASDSAYTEFIRHELTRDYLRSLVRRGSSKVEAYITVLTTDDYRVQIQPVAVT 122
Query: 469 NKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHG 648
K A +Q +AIR+ M +++ + ++++ ++ ++ I
Sbjct: 123 TKK---------ADASQEKAIRRTMIDLVRETAEDHTFEQLIDSVVEGRLSSAIYGEAKD 173
Query: 649 IYPLRDVCIRK 681
IYPLR V I+K
Sbjct: 174 IYPLRRVEIKK 184
>UniRef50_A5UKY8 Cluster: Small subunit ribosomal protein S3Ae; n=2;
Methanobacteriaceae|Rep: Small subunit ribosomal protein
S3Ae - Methanobrevibacter smithii (strain PS / ATCC
35061 / DSM 861)
Length = 193
Score = 66.1 bits (154), Expect = 8e-10
Identities = 50/207 (24%), Positives = 94/207 (45%)
Frame = +1
Query: 70 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 249
K ++++ D + K WY +K P F +++G T + L GR EV++ +
Sbjct: 3 KAKARRRVRDTWKEKSWYTIKTPVNFEDKEIGETPARDP-------DYLIGRGVEVTMRE 55
Query: 250 LQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTT 429
L D + + K R + V G F G TTD +R M+++ + I+A+ VKT
Sbjct: 56 LSGDFS--KQYIKLRFEIDNVAGDVANTKFTGHKTTTDYVRSMIRRGTSRIDASSVVKTK 113
Query: 430 DGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP 609
D +++ + T T A+ +Q + +R+ + +++ E++ ++
Sbjct: 114 DDRKVKLHVLAVT---------TRRAKSSQQKYMRQVINDLLAETAAEKSFDELIKLVVN 164
Query: 610 DSIAKDIEKACHGIYPLRDVCIRKVKV 690
+A ++ IYPL+ V I K KV
Sbjct: 165 GKLASEVYHNAKKIYPLKRVEIIKSKV 191
>UniRef50_A7IAJ1 Cluster: Ribosomal protein S3Ae; n=1; Candidatus
Methanoregula boonei 6A8|Rep: Ribosomal protein S3Ae -
Methanoregula boonei (strain 6A8)
Length = 201
Score = 64.5 bits (150), Expect = 2e-09
Identities = 55/207 (26%), Positives = 92/207 (44%)
Frame = +1
Query: 70 KKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLAD 249
KK + V+ + K W+ V P K +G T+ + E +KGR+ + +L +
Sbjct: 3 KKKQAGRRVEGWKAKSWFKVYTPDNLGKAYIGDTIASEV-------ETVKGRIMQATLGE 55
Query: 250 LQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTT 429
+ D + F+ IAE V G F G ++T D LR +VK+ + I+ ++ V T
Sbjct: 56 ITNDYAKQHIKMSFK-IAE-VTGDAAYTEFVGHEVTRDYLRSLVKRRSSRIDCHVQVVTK 113
Query: 430 DGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIP 609
D +R+ ++S A Q A+R + + +L +VN ++
Sbjct: 114 DNKKVRL---------TISCYTFARANIAQEHALRNAITAGLVAQAQAWDLNTLVNGVVS 164
Query: 610 DSIAKDIEKACHGIYPLRDVCIRKVKV 690
I+KD+ K +YP R V I K KV
Sbjct: 165 GEISKDLFKLVKTLYPTRRVEIIKSKV 191
>UniRef50_A2SQ57 Cluster: Ribosomal protein S3Ae; n=1;
Methanocorpusculum labreanum Z|Rep: Ribosomal protein
S3Ae - Methanocorpusculum labreanum (strain ATCC 43576 /
DSM 4855 / Z)
Length = 206
Score = 63.3 bits (147), Expect = 5e-09
Identities = 52/207 (25%), Positives = 95/207 (45%), Gaps = 1/207 (0%)
Frame = +1
Query: 64 AVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSL 243
A KK + V+ + K+WY V AP K+ +G + + E + GRV VSL
Sbjct: 2 ARKKQSGGRKVEGWKAKNWYKVHAPEFLGKQFIGEIISSNP-------ENVPGRVLTVSL 54
Query: 244 ADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVK 423
+L D + F+++ V G F+G ++T + +R MVKK + +++ I V
Sbjct: 55 GELIQDYSKQNVRASFKIMN--VAGDAAYTQFNGHEMTKEFVRAMVKKRASRVDSTITVT 112
Query: 424 TTDG-YVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 600
L+V FT +A+ +QV+ +R KM +++ ++ V+
Sbjct: 113 PLGSTRELQVTITAFTIN---------HARLSQVQELRAKMVKVVEDSAKEADFESFVSA 163
Query: 601 LIPDSIAKDIEKACHGIYPLRDVCIRK 681
++ ++K + C I+P+R + I K
Sbjct: 164 MLKGELSKKMFAECKPIFPVRRIEIIK 190
>UniRef50_A4GI78 Cluster: Ribosomal protein S3AE; n=1; uncultured
marine bacterium HF10_29C11|Rep: Ribosomal protein S3AE
- uncultured marine bacterium HF10_29C11
Length = 322
Score = 62.5 bits (145), Expect = 9e-09
Identities = 51/207 (24%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
Frame = +1
Query: 64 AVKKGVKKKIVDPFTRKDWYDVKAPSM-FSKRQVGTTLVNRTQGTKIASEGLKGRVFEVS 240
A + +K D + K WY ++AP ++ + +G T+ + E + GR++E++
Sbjct: 10 AKARAAARKQRDKWKTKRWYTIRAPRHPWNYQNIGETIGE-------SDEHIIGRIYEMT 62
Query: 241 LADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDV 420
+ D +FR ++E V G++ L F G T+ +R +++++ I+ IDV
Sbjct: 63 QQEFNGDFTKMHVMLRFR-VSETV-GQDALTTFVGHHHQTNHIRRQIRRYRGKIDDVIDV 120
Query: 421 KTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNK 600
T DGY++R+ + T K Q + ++IR K +++ V + +
Sbjct: 121 VTEDGYLVRIKPLIITQK---------RVQTSVKQSIRAKTRDVLLGYVAKTTYDALQVA 171
Query: 601 LIPDSIAKDIEKACHGIYPLRDVCIRK 681
++ S+ +I+ IYP R V IRK
Sbjct: 172 MLDGSLETEIQNQIKTIYPCRSVVIRK 198
>UniRef50_Q3LW71 Cluster: Ribosomal protein S3a; n=1; Bigelowiella
natans|Rep: Ribosomal protein S3a - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 215
Score = 60.1 bits (139), Expect = 5e-08
Identities = 44/193 (22%), Positives = 87/193 (45%), Gaps = 1/193 (0%)
Frame = +1
Query: 112 KDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADTDAERSFRKF 291
K+W V AP +F + +G + N+ + + R EVSL++L D S+ K
Sbjct: 25 KEWKIVIAPKIFEYKIIGYIINNKYTNNSGRLKEISKRNLEVSLSELINDYS---SYYKI 81
Query: 292 RLIAEYVQGRNVL-CNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFT 468
+ Y + + F+G L+ D + MV K L+E +I + T V+ +F + +T
Sbjct: 82 IKLQPYTMNKMFIRTTFNGFRLSYDFIFSMVLKPTKLVEFSIKINTLKKKVVEIFVL-YT 140
Query: 469 NKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEKACHG 648
+L Y + +++R I ++ I + + N + + D I I++
Sbjct: 141 ITKNLHSNSITYGKRSRIRKINRESILCIKKMLENKPIDFIYKICCSDVIGNSIKRRSKR 200
Query: 649 IYPLRDVCIRKVK 687
+ P+++ I ++K
Sbjct: 201 VIPIKNFIISRIK 213
>UniRef50_A4D1I1 Cluster: Similar to ribosomal protein S3a; 40S
ribosomal protein S3a; v-fos transformation effector
protein 1; n=2; Eutheria|Rep: Similar to ribosomal
protein S3a; 40S ribosomal protein S3a; v-fos
transformation effector protein 1 - Homo sapiens (Human)
Length = 119
Score = 58.0 bits (134), Expect = 2e-07
Identities = 24/44 (54%), Positives = 32/44 (72%)
Frame = +1
Query: 40 GKIKACRRAVKKGVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTT 171
GK K + KKG KKK++D F++KDWYDVKA +MF+ R +G T
Sbjct: 4 GKNKCFMKGSKKGAKKKVIDQFSKKDWYDVKALAMFNIRNIGKT 47
>UniRef50_A6NFQ6 Cluster: Uncharacterized protein ENSP00000341960;
n=40; Coelomata|Rep: Uncharacterized protein
ENSP00000341960 - Homo sapiens (Human)
Length = 79
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/32 (78%), Positives = 27/32 (84%)
Frame = +1
Query: 595 NKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 690
NKLIPDSI KDIEKAC IYPL DV +RKVK+
Sbjct: 1 NKLIPDSIGKDIEKACQSIYPLHDVFVRKVKM 32
>UniRef50_Q978Z2 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasma|Rep: 30S ribosomal protein S3Ae -
Thermoplasma volcanium
Length = 215
Score = 55.2 bits (127), Expect = 1e-06
Identities = 51/200 (25%), Positives = 85/200 (42%)
Frame = +1
Query: 82 KKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 261
+KK + + K WY V+AP ++V L S + RV EV +++L +
Sbjct: 7 QKKGKEKWKEKVWYTVEAPPYLGSKEVSVALGED-------SNSMVNRVVEVPISELTGN 59
Query: 262 TDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYV 441
FR+ +G F G + D +R +V++ + I+ DVKT+D +
Sbjct: 60 FKKSNEKALFRITN--CEGTKCKTIFIGHYIGDDYIRRLVRRRKERIDIIEDVKTSDNSI 117
Query: 442 LRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIA 621
+ V + T+ + +K IRK + + I + E V LI D I
Sbjct: 118 ITVKIVVVTDGKVTNTKKF---------QIRKVLTDFILNKGLSLPYSEFVRYLIGDDIY 168
Query: 622 KDIEKACHGIYPLRDVCIRK 681
D+ A IYPL+ + +RK
Sbjct: 169 NDMISATKDIYPLKKIEVRK 188
>UniRef50_Q6KYU3 Cluster: 30S ribosomal protein S3Ae; n=2;
Thermoplasmatales|Rep: 30S ribosomal protein S3Ae -
Picrophilus torridus
Length = 209
Score = 54.8 bits (126), Expect = 2e-06
Identities = 50/199 (25%), Positives = 85/199 (42%), Gaps = 1/199 (0%)
Frame = +1
Query: 97 DPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLK-GRVFEVSLADLQADTDAE 273
D + K WY + APS +R++ + A L GR EV ++D +
Sbjct: 11 DKWKEKTWYTIVAPSFLGEREIALS--------PAADPSLMIGRKVEVPVSDFTGNFRKS 62
Query: 274 RSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVF 453
+ FR+ + G+ F G ++ D +R MV++ + I+ + KT DGY L V
Sbjct: 63 STMVIFRV--KECTGKRCTTEFIGHKVSDDTIRRMVRRRKERIDIIMPSKTKDGYRL-VI 119
Query: 454 CIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIE 633
I + L+ K +R K+ I + L E+ +I D++ DI
Sbjct: 120 KIVLVSDSKLTANKR--------GEVRSKIIGFINERCGSMTLPELAQYIIGDNVYNDIV 171
Query: 634 KACHGIYPLRDVCIRKVKV 690
+YP++ + IRK +V
Sbjct: 172 DTLKDVYPIKKIEIRKSEV 190
>UniRef50_A3H9G4 Cluster: Ribosomal protein S3Ae; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S3Ae -
Caldivirga maquilingensis IC-167
Length = 221
Score = 54.4 bits (125), Expect = 2e-06
Identities = 47/157 (29%), Positives = 68/157 (43%)
Frame = +1
Query: 220 GRVFEVSLADLQADTDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTL 399
GR E +L DL D +FR+ V L F+GM+LT D +R +V++ +
Sbjct: 50 GRNVETTLYDLTKDLSHINVKLRFRVNG--VDDGRALTQFNGMELTRDYVRNLVRRGSSK 107
Query: 400 IEANIDVKTTDGYVLRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSE 579
+ DV T DG LR+ + T T T IRK + + + + S+
Sbjct: 108 VMVIKDVTTKDGGKLRMEVLAIT---------TYRCTRTHKHLIRKSIMDRLDKVGQESD 158
Query: 580 LREVVNKLIPDSIAKDIEKACHGIYPLRDVCIRKVKV 690
+V I I D+ IYPLR V I K+KV
Sbjct: 159 FDSLVRDSIMGKIQVDLFNVAKKIYPLRKVEIIKIKV 195
>UniRef50_A0RTS7 Cluster: Ribosomal protein S3AE; n=2;
Thermoprotei|Rep: Ribosomal protein S3AE - Cenarchaeum
symbiosum
Length = 203
Score = 52.4 bits (120), Expect = 1e-05
Identities = 48/203 (23%), Positives = 88/203 (43%)
Frame = +1
Query: 82 KKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQAD 261
K K+ D + K W + AP F+ V V T + KGRV EV+L D+
Sbjct: 5 KIKVKDKWRDKRWITIHAPDSFNS--VPAARVPITD-----DKHAKGRVIEVTLFDILKG 57
Query: 262 TDAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYV 441
+ +++ + I + V + F + + + LR +V++ + + +DVKT+DGYV
Sbjct: 58 DPQQNNYKIYFQI-DKVSEESATSIFKRYEYSKEYLRSLVRRGSSKVNYIVDVKTSDGYV 116
Query: 442 LRVFCIGFTNKDSLSQRKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIA 621
R+ + T + + +K A+R + ++I V + + V I
Sbjct: 117 FRLKVLALTYRHLNTSKK---------HALRLIIRDVIENTVPQMNIDQFVQAACYGKIN 167
Query: 622 KDIEKACHGIYPLRDVCIRKVKV 690
DI + +R + + KVK+
Sbjct: 168 SDILSRAKKLVKVRHMGLEKVKL 190
>UniRef50_A7QAT4 Cluster: Chromosome chr5 scaffold_72, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr5 scaffold_72, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 168
Score = 52.0 bits (119), Expect = 1e-05
Identities = 30/83 (36%), Positives = 49/83 (59%)
Frame = -1
Query: 318 SLHIFGD*SEFAERPFRVSVSL*ISQGNFENSSLQSFRSNFRSLGTVDKRGADLPLAEHR 139
SLH+ G S+ + + L ISQGN ++S L+ FR + S + +K A++ AE R
Sbjct: 61 SLHVLGSQSDLPVG--MILIVLNISQGNLKHSVLEPFRGDLGSQSSANKGFANISDAEDR 118
Query: 138 RSLDIVPIFASEWVDNLLLNTFF 70
R L+++P+ S+ V LLL++ F
Sbjct: 119 RRLNVIPVLLSKRVGCLLLSSLF 141
>UniRef50_Q74N14 Cluster: 30S ribosomal protein S3Ae; n=2;
Nanoarchaeum equitans|Rep: 30S ribosomal protein S3Ae -
Nanoarchaeum equitans
Length = 198
Score = 38.7 bits (86), Expect = 0.13
Identities = 47/200 (23%), Positives = 90/200 (45%), Gaps = 1/200 (0%)
Frame = +1
Query: 85 KKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQADT 264
KK D + RK W+ +KAP++F++ ++G T + E + GR E+++A + +
Sbjct: 5 KKYAD-WKRKIWFTIKAPAIFNEVELGETPAYK-------PEQVIGRRVELNMALVTNNY 56
Query: 265 DAERSFRKFRLIAEYVQGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVL 444
+ F++ V+G G+ + ++ V+ + I + +K D ++
Sbjct: 57 QLQNYKGIFKITK--VEGTTAKTELEGIKMYESIIQKWVEPGRDKITDSFVIKDKDNRLV 114
Query: 445 RVFCIGFTNKDSLSQRKTCYAQHTQVRAI-RKKMCEIITRDVTNSELREVVNKLIPDSIA 621
RV + TN R+ Q T +R I R E+ + + +++NK IP+ +
Sbjct: 115 RVKPVLITN------RRLHRKQGTAIRNIWRNYFVELGKKLSFEDMVMKILNKEIPEQLK 168
Query: 622 KDIEKACHGIYPLRDVCIRK 681
I+K IYP IR+
Sbjct: 169 IQIKK----IYPPLFFAIRQ 184
>UniRef50_Q87BL9 Cluster: DNA helicase; n=5; Xylella fastidiosa|Rep:
DNA helicase - Xylella fastidiosa (strain Temecula1 /
ATCC 700964)
Length = 1190
Score = 34.3 bits (75), Expect = 2.9
Identities = 22/82 (26%), Positives = 32/82 (39%)
Frame = +1
Query: 76 GVKKKIVDPFTRKDWYDVKAPSMFSKRQVGTTLVNRTQGTKIASEGLKGRVFEVSLADLQ 255
G++++ D W + + + Q T + A GL +VSLAD
Sbjct: 548 GMQRQCDDRLQEHSWAVTRGEKVLHEEQCHITTWQAALAKESALTGLMEAAGQVSLADCD 607
Query: 256 ADTDAERSFRKFRLIAEYVQGR 321
A D FR F L Y +GR
Sbjct: 608 ALADTSIRFRIFLLTTHYWEGR 629
>UniRef50_Q4SVA9 Cluster: Chromosome undetermined SCAF13769, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF13769, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 556
Score = 33.9 bits (74), Expect = 3.8
Identities = 19/55 (34%), Positives = 33/55 (60%)
Frame = -2
Query: 416 SMLASMRVCHFLTIHLSLSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSASVSAC 252
S+L S+ +C L++ +SLS+ S+ + +LRPC ++ ++L LS VS C
Sbjct: 389 SVLVSLSLCLSLSVLVSLSLSSSLSLSVPVSLRPCLSLSVLVSL--SLSVPVSLC 441
>UniRef50_Q4P2U9 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 3702
Score = 33.5 bits (73), Expect = 5.0
Identities = 27/106 (25%), Positives = 52/106 (49%)
Frame = +1
Query: 313 QGRNVLCNFHGMDLTTDKLRWMVKKWQTLIEANIDVKTTDGYVLRVFCIGFTNKDSLSQR 492
Q ++ CN G+D+ D+++ V + +ID D VF G D+L R
Sbjct: 517 QAFDLFCNARGLDVLVDRIKAEVNR-------DIDDGAADRMSDSVF--GEPGPDNLYGR 567
Query: 493 KTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDI 630
+ + + + +R++ K + +++ T LR +VN +PDS+ + I
Sbjct: 568 LS-FGRASLLRSMFKTITQMMASTGTGDGLRNLVNTSLPDSLKRII 612
>UniRef50_Q119K9 Cluster: Putative uncharacterized protein precursor;
n=1; Trichodesmium erythraeum IMS101|Rep: Putative
uncharacterized protein precursor - Trichodesmium
erythraeum (strain IMS101)
Length = 2322
Score = 33.1 bits (72), Expect = 6.6
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = -1
Query: 567 DVACNDFTHFLSDCSDLSVLGVARLALAQGVLIGET 460
+V NDF LSD ++S LG+A +A G+LI T
Sbjct: 2048 EVGLNDFQLMLSDRLEMSFLGIANFQVAGGLLINGT 2083
>UniRef50_A0YI31 Cluster: DNA mismatch repair protein; n=5;
Cyanobacteria|Rep: DNA mismatch repair protein - Lyngbya
sp. PCC 8106
Length = 563
Score = 33.1 bits (72), Expect = 6.6
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Frame = -2
Query: 365 LSVVRSMPWKLQSTLRPCTYSAINLNLRKDLSAS--VSACRSARETSKTLPFNPSEAIFV 192
L VR++P ++ + C + I L+L KDL A+ +ACRSA L + +
Sbjct: 463 LWAVRTVP-EMLAQREDCHDALIELSLGKDLQAAQVATACRSAIRNGTPLSLTEMQTLLE 521
Query: 191 PWVR 180
WVR
Sbjct: 522 QWVR 525
>UniRef50_Q7R086 Cluster: GLP_56_8972_10474; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_56_8972_10474 - Giardia lamblia ATCC
50803
Length = 500
Score = 33.1 bits (72), Expect = 6.6
Identities = 29/91 (31%), Positives = 47/91 (51%), Gaps = 1/91 (1%)
Frame = -2
Query: 311 TYSAINLNLRKDLSASVSACRSARETSKTLPFNPSEAIFVPWVRLTSVVPTCLLLNIDGA 132
T SA +N ++ L+ +S CR +++LP N S I +P R ++ T L + G+
Sbjct: 332 TNSADIMN-KEPLAVCISLCRP----NQSLPNNLSNVISIPVCR--NLKYTTNLSRVLGS 384
Query: 131 L-TSYQSLRVNGSTIFFLTPFFTALRQAFIF 42
+ ++Q LR NG+ IF+ AFIF
Sbjct: 385 IHATFQELRSNGTVIFYSGQDCQVALAAFIF 415
>UniRef50_Q0KDB8 Cluster: L-Amino-acid oxidase; n=3; cellular
organisms|Rep: L-Amino-acid oxidase - Ralstonia eutropha
(strain ATCC 17699 / H16 / DSM 428 / Stanier
337)(Cupriavidus necator (strain ATCC 17699 / H16 / DSM
428 / Stanier337))
Length = 434
Score = 32.7 bits (71), Expect = 8.7
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 347 WTSQPISSGGWL--KNGRLSSKPTLM*RQPMDTFYVSSALVSPI 472
W + P S GGW+ + G L+ LM RQP + + A ++PI
Sbjct: 363 WANDPFSKGGWMHHRPGNLTQAAPLM-RQPHGRIHFAGADIAPI 405
>UniRef50_Q22Y97 Cluster: TPR Domain containing protein; n=1;
Tetrahymena thermophila SB210|Rep: TPR Domain containing
protein - Tetrahymena thermophila SB210
Length = 553
Score = 32.7 bits (71), Expect = 8.7
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 490 RKTCYAQHTQVRAIRKKMCEIITRDVTNSELREVVNKLIPDSIAKDIEK 636
R CY + Q++ + + D TNSE+ +VNKL +SI K +K
Sbjct: 496 RAKCYVEMKQMQEAIEDYIQCYKLDPTNSEVGVIVNKLKQESILKKKDK 544
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 720,357,387
Number of Sequences: 1657284
Number of extensions: 15118934
Number of successful extensions: 45783
Number of sequences better than 10.0: 50
Number of HSP's better than 10.0 without gapping: 44051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 45737
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -