Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11k14
         (690 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.0  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.0  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    23   3.1  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    23   3.1  
AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical pro...    23   3.1  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    23   3.1  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    23   3.1  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   4.1  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    21   9.5  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           21   9.5  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -1

Query: 90  LLLNTFFYRPSTGLYFSRPPCS-NTNLR 10
           +L N   + P     FSR PCS N NL+
Sbjct: 189 MLTNAVCFVPGVVAMFSRKPCSINENLK 216


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 24.2 bits (50), Expect = 1.0
 Identities = 12/28 (42%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
 Frame = -1

Query: 90  LLLNTFFYRPSTGLYFSRPPCS-NTNLR 10
           +L N   + P     FSR PCS N NL+
Sbjct: 189 MLTNAVCFVPGVVAMFSRKPCSINENLK 216


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 9/22 (40%), Positives = 10/22 (45%)
 Frame = -3

Query: 688 LSPFGCKHRAEGRCHGRPSRCP 623
           L P+    R   RCHG    CP
Sbjct: 336 LWPYTMYFRMPHRCHGNLQSCP 357


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/10 (80%), Positives = 9/10 (90%)
 Frame = +2

Query: 374 GWLKNGRLSS 403
           GWLK G+LSS
Sbjct: 124 GWLKKGKLSS 133


>AM712903-1|CAN84642.1|  148|Tribolium castaneum hypothetical
           protein protein.
          Length = 148

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -1

Query: 81  NTFFYRPSTGLYFSRPPCSNTNLRKA 4
           NT F   S  + F +  CSN+ LRKA
Sbjct: 45  NTDFSFGSKTIDFRKIQCSNSPLRKA 70


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -1

Query: 213 SFRSNFRSLGTVDKRGADLPLAEHRRSLDIVP-IFASEWVDNLLLNTF 73
           S  S+  SL  + K  A LP+ +H R   +VP ++ + +   L L +F
Sbjct: 2   SLYSSINSLVLISKIFALLPVKKHHRLEKLVPCVYLTSFSVVLSLGSF 49


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -3

Query: 484 SRSPYW*NQCRRHVERIHRLSSHQC 410
           +  P+  ++CR    R H L  H+C
Sbjct: 243 NEKPFECDKCRGRFRRRHHLVHHKC 267


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 627 HREGLPWHLPSARCLHPKGES 689
           HRE + W + + R ++ +GES
Sbjct: 290 HREDVRWVMIALRQMYDRGES 310


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 494 LRWLKESLLVKPMQKTRRTYPSVVFTSMLASMR 396
           ++W K++ L       R+T P+ V T+    +R
Sbjct: 286 MKWKKDNKLPNTKNVRRKTNPAGVTTTTKGKVR 318


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = -2

Query: 494 LRWLKESLLVKPMQKTRRTYPSVVFTSMLASMR 396
           ++W K++ L       R+T P+ V T+    +R
Sbjct: 286 MKWKKDNKLPNTKNVRRKTNPAGVTTTTKGKVR 318


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,518
Number of Sequences: 336
Number of extensions: 3746
Number of successful extensions: 10
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)