Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11k06
         (638 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan oxyge...    27   0.17 
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    27   0.17 
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    27   0.17 
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   2.8  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    22   5.0  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   8.7  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   8.7  

>AY052394-1|AAL15468.1|  228|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 228

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = -3

Query: 594 SIIYQWRYNHLLKL-RLLHSKQ 532
           S+I +WRYNH+L + R++ S Q
Sbjct: 140 SLITKWRYNHVLMVQRMIGSSQ 161


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = -3

Query: 594 SIIYQWRYNHLLKL-RLLHSKQ 532
           S+I +WRYNH+L + R++ S Q
Sbjct: 300 SLITKWRYNHVLMVQRMIGSSQ 321


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 26.6 bits (56), Expect = 0.17
 Identities = 11/22 (50%), Positives = 17/22 (77%), Gaps = 1/22 (4%)
 Frame = -3

Query: 594 SIIYQWRYNHLLKL-RLLHSKQ 532
           S+I +WRYNH+L + R++ S Q
Sbjct: 300 SLITKWRYNHVLMVQRMIGSSQ 321


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
 Frame = -1

Query: 572 ITTY*N*DYCTVNR-QKY----SALHWSATIMEY*SCYHCRL 462
           +TTY   DYCTV R Q++    S  H+        +  HC L
Sbjct: 499 VTTYLMFDYCTVLRVQRFNNYQSLAHYLRVFFTVFNVVHCYL 540


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 102 IILKC*YLIHVYVFTFTYSYLN 37
           II+ C    +  VF+F Y Y N
Sbjct: 257 IIIGCLIQFNTIVFSFCYCYYN 278



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = -3

Query: 102 IILKC*YLIHVYVFTFTYSYLNMPDRFVGIL 10
           II+ C    +  VF F Y Y ++  R +  L
Sbjct: 538 IIIGCLIQFNTIVFAFCYCYYSISIRPISTL 568


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/34 (23%), Positives = 16/34 (47%)
 Frame = -2

Query: 136 YVFILKSQCNTHNS*MLIFNTCVRIYFYLFLLKH 35
           Y+ +  +Q     + + +   CV + F L+ L H
Sbjct: 237 YIILTNNQAKYCTTLIGLIKNCVIVIFELYYLSH 270


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/37 (21%), Positives = 16/37 (43%)
 Frame = -3

Query: 234 VHQENCTLESIRCNTFETTPLIIILLKFQPCLLMYLF 124
           VH E C L  +  + +     + +L  F  C+  + +
Sbjct: 217 VHNELCNLCQVANSIYGFQNFLFVLSTFSICITQFYY 253


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,701
Number of Sequences: 336
Number of extensions: 3800
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 16501678
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)