Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11k04
(746 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78015-4|CAB01436.2| 149|Caenorhabditis elegans Hypothetical pr... 37 0.013
U61958-3|AAB03180.2| 149|Caenorhabditis elegans Hypothetical pr... 36 0.040
AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical ... 35 0.053
Z69787-12|CAM84810.1| 234|Caenorhabditis elegans Hypothetical p... 33 0.28
Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical pr... 31 0.66
Z79755-13|CAB02114.1| 819|Caenorhabditis elegans Hypothetical p... 31 0.66
AF039716-5|AAB96740.1| 488|Caenorhabditis elegans Hypothetical ... 30 2.0
Z80220-4|CAB02307.2| 566|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF002198-7|AAF99935.1| 693|Caenorhabditis elegans Hypothetical ... 29 3.5
U58749-3|AAK18875.1| 202|Caenorhabditis elegans Hypothetical pr... 28 6.1
AF078784-3|AAY86249.1| 254|Caenorhabditis elegans Hypothetical ... 28 6.1
Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical pr... 28 8.1
L15313-1|AAA28202.1| 305|Caenorhabditis elegans Hypothetical pr... 28 8.1
>Z78015-4|CAB01436.2| 149|Caenorhabditis elegans Hypothetical
protein R02D5.7 protein.
Length = 149
Score = 37.1 bits (82), Expect = 0.013
Identities = 16/38 (42%), Positives = 21/38 (55%)
Frame = +1
Query: 586 KSLMSAENTPKKKYKRNNSDLSDERSFNNCNSATPDQL 699
KS SA++ K K++ D DE + NC TPDQL
Sbjct: 101 KSKKSAKSKKSSKSKKDKKDGEDENGYENCQDMTPDQL 138
>U61958-3|AAB03180.2| 149|Caenorhabditis elegans Hypothetical
protein C25A8.2 protein.
Length = 149
Score = 35.5 bits (78), Expect = 0.040
Identities = 15/38 (39%), Positives = 21/38 (55%)
Frame = +1
Query: 586 KSLMSAENTPKKKYKRNNSDLSDERSFNNCNSATPDQL 699
KS SA++ K K++ D +E + NC TPDQL
Sbjct: 101 KSKKSAKSKKSSKSKKDKKDGEEENGYENCQDMTPDQL 138
>AF047663-6|AAC04447.1| 368|Caenorhabditis elegans Hypothetical
protein W09G12.7 protein.
Length = 368
Score = 35.1 bits (77), Expect = 0.053
Identities = 22/79 (27%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 469 DQEQDALQNDDSNQFTEVIYV-EEKRNKSPKHGYLSAKTPKSLMSAENTPKKKYKRNNSD 645
+ D+ N DS++ ++ ++K+ KS K S+ + S S+++ KKK K++ D
Sbjct: 77 ESSDDSSDNSDSSESSDDDKKSKKKKKKSKKDSSDSSDSSDSSDSSDDGKKKKKKKSKKD 136
Query: 646 LSDERSFNNCNSATPDQLD 702
SD+ S ++ +S + D D
Sbjct: 137 SSDDSSDSSDSSDSSDSSD 155
>Z69787-12|CAM84810.1| 234|Caenorhabditis elegans Hypothetical
protein C44C10.9b protein.
Length = 234
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
Frame = +1
Query: 565 YLSAKTPKSLMSAENTPKKKYK--RNNSDLSDERSFNNCNSATPDQLDS 705
YL ++ K + +T KY RNN +L DE +F +TPD + S
Sbjct: 91 YLKSRPKKDANATSSTTGNKYSALRNNGELVDEYAFQEQKYSTPDDIYS 139
>Z97628-3|CAB10727.1| 819|Caenorhabditis elegans Hypothetical
protein F43G9.12 protein.
Length = 819
Score = 31.5 bits (68), Expect = 0.66
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 394 VREDRRGILSEARRQCGITFEIEGLDQEQDALQND-DSNQFTEVIYVEEKRNKSPKHGYL 570
+++D++ + E +RQ + E E L +E+ + D E + E+K+ K+ +H YL
Sbjct: 59 LKKDKKKV-EELKRQHKLEEEAEKLYKEEKIRKEALDKIVKKEKLSKEDKKTKNERHKYL 117
Query: 571 SAKTPKSLMSAENTPKKKYKRN 636
KS N+ +Y+ N
Sbjct: 118 DKYRDKSAKHISNSESYEYEEN 139
>Z79755-13|CAB02114.1| 819|Caenorhabditis elegans Hypothetical
protein F43G9.12 protein.
Length = 819
Score = 31.5 bits (68), Expect = 0.66
Identities = 21/82 (25%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +1
Query: 394 VREDRRGILSEARRQCGITFEIEGLDQEQDALQND-DSNQFTEVIYVEEKRNKSPKHGYL 570
+++D++ + E +RQ + E E L +E+ + D E + E+K+ K+ +H YL
Sbjct: 59 LKKDKKKV-EELKRQHKLEEEAEKLYKEEKIRKEALDKIVKKEKLSKEDKKTKNERHKYL 117
Query: 571 SAKTPKSLMSAENTPKKKYKRN 636
KS N+ +Y+ N
Sbjct: 118 DKYRDKSAKHISNSESYEYEEN 139
>AF039716-5|AAB96740.1| 488|Caenorhabditis elegans Hypothetical
protein W03G9.5 protein.
Length = 488
Score = 29.9 bits (64), Expect = 2.0
Identities = 29/105 (27%), Positives = 44/105 (41%), Gaps = 7/105 (6%)
Frame = +1
Query: 391 NVREDRRGILSEARRQCGITFEIEGLDQEQDALQNDDSNQF-------TEVIYVEEKRNK 549
NV ++ R I E G T E EGL+ QD +D N F + +K
Sbjct: 337 NVPQNERNITMEEIIAAGKTTEEEGLNTAQDDTIVEDENGFLGKQEAKPATPSARSETSK 396
Query: 550 SPKHGYLSAKTPKSLMSAENTPKKKYKRNNSDLSDERSFNNCNSA 684
K Y+ A+TP S E +K +K+ + + E+ N +A
Sbjct: 397 KVKRRYI-ARTP-SAHKIEQI-EKNWKKKEEEANKEKLLKNARAA 438
>Z80220-4|CAB02307.2| 566|Caenorhabditis elegans Hypothetical
protein T08G11.4 protein.
Length = 566
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +1
Query: 421 SEARRQCGITFEIEGLDQEQDALQNDDSNQFTEVI 525
+E +QC + I +DQ +D L+N D Q T+ +
Sbjct: 155 NELTKQCEVMKPIYPIDQHKDILENPDYQQITKTM 189
>AF002198-7|AAF99935.1| 693|Caenorhabditis elegans Hypothetical
protein F35F10.10 protein.
Length = 693
Score = 29.1 bits (62), Expect = 3.5
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = +1
Query: 538 KRNKSPKHGYLSAKTPKSLMSAENTPK 618
++NK KHG L+ +T + + ENTPK
Sbjct: 57 EKNKESKHGSLANQTSANNATEENTPK 83
>U58749-3|AAK18875.1| 202|Caenorhabditis elegans Hypothetical
protein B0496.4 protein.
Length = 202
Score = 28.3 bits (60), Expect = 6.1
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = +1
Query: 463 GLDQEQDALQNDDSNQFTEVIYVEEKRNKSPKHGYLSAKTPKSLMSAENTPKKKYKRNNS 642
G D DAL N N+ E + K +S + L A+T + + ++ K+Y NNS
Sbjct: 108 GKDPAIDALMNKYLNKSKENLDEGRKSRESSRAQELLARTNREMSPTIDSLMKRYGNNNS 167
>AF078784-3|AAY86249.1| 254|Caenorhabditis elegans Hypothetical
protein H34I24.3 protein.
Length = 254
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/44 (31%), Positives = 26/44 (59%)
Frame = +1
Query: 448 TFEIEGLDQEQDALQNDDSNQFTEVIYVEEKRNKSPKHGYLSAK 579
TF I G++++QD+ Q+ E I+ E+K + + K+ L+ K
Sbjct: 176 TFLINGMEEKQDSDQSSIKRPSHENIHEEQKIHSTAKNPLLTTK 219
>Z75533-1|CAA99815.1| 423|Caenorhabditis elegans Hypothetical
protein C54G4.2 protein.
Length = 423
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +1
Query: 520 VIYVEEKRNKSPK--HGYLSAKTPKSLMSAENTPKKKYKRNNSD 645
V+YVEE++ KS K H L+ K K +M ++ + K + D
Sbjct: 129 VVYVEEEKEKSEKKFHMILAQKFFKRMMESQKSMKNPSLKKRDD 172
>L15313-1|AAA28202.1| 305|Caenorhabditis elegans Hypothetical
protein ZK353.4 protein.
Length = 305
Score = 27.9 bits (59), Expect = 8.1
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 472 QEQDALQNDDSNQFTEVIYVEEKRNKSPKHGYLSAKTPKSLMSAENTPKKKYKRNNSDLS 651
Q ++ + DD ++ T ++EK K PK A+ PK + +TPK + + +
Sbjct: 97 QSPESTEQDDFSKTTVDETIKEKSEKQPK---TCAQKPKVPIPKASTPKTEKLVSKEPST 153
Query: 652 DERSFNN 672
+E S N
Sbjct: 154 EELSVKN 160
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,543,289
Number of Sequences: 27780
Number of extensions: 304159
Number of successful extensions: 948
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 912
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 948
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -