Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11k01
         (698 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0349 - 2614682-2614721,2614881-2614955,2615346-2615538,261...    31   1.2  
02_01_0707 - 5276963-5278396,5280163-5280248,5280634-5281011,528...    30   2.0  
12_01_0370 - 2835071-2835285,2835427-2836045                           29   2.7  
12_01_1115 - 11904334-11904500,11905196-11905196,11905356-119055...    29   4.7  
07_01_0049 + 382526-383031,383385-384000                               28   6.2  
01_05_0013 - 17156017-17157647,17157977-17158144,17160064-171601...    28   6.2  
01_01_0151 - 1346942-1347682                                           28   6.2  
01_06_0877 + 32662978-32663179,32663718-32663951,32664080-326641...    28   8.2  
01_01_0156 - 1364856-1365401                                           28   8.2  

>11_01_0349 -
           2614682-2614721,2614881-2614955,2615346-2615538,
           2615654-2616287
          Length = 313

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 10/18 (55%), Positives = 13/18 (72%)
 Frame = +1

Query: 310 QPTAWPWTVAIYRNGMFH 363
           QP +WPW VA+Y N  +H
Sbjct: 12  QPQSWPWGVAMYANFHYH 29


>02_01_0707 -
           5276963-5278396,5280163-5280248,5280634-5281011,
           5281453-5281690,5281787-5282052,5282148-5282526
          Length = 926

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 19/73 (26%), Positives = 30/73 (41%)
 Frame = +1

Query: 223 YWRNRNELNRPWYIRNMRSESRVVGGKPSQPTAWPWTVAIYRNGMFHCGGVIITQNWVIS 402
           Y+++  E+     +R    E R  G    +   W W     R+G+    GV+ T  WV S
Sbjct: 718 YYKSDEEVACDEEVRAWWEEVRTKGHADKKDEPW-WPAVDTRDGLI---GVLTTIMWVTS 773

Query: 403 AAHCVHKFWDHYY 441
             H    F  ++Y
Sbjct: 774 GHHAAVNFGQYHY 786


>12_01_0370 - 2835071-2835285,2835427-2836045
          Length = 277

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 10/17 (58%), Positives = 12/17 (70%)
 Frame = +1

Query: 313 PTAWPWTVAIYRNGMFH 363
           P AWPW VA+Y N  +H
Sbjct: 11  PQAWPWGVAMYTNLHYH 27


>12_01_1115 -
           11904334-11904500,11905196-11905196,11905356-11905508,
           11905559-11905969
          Length = 243

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 15/44 (34%), Positives = 18/44 (40%)
 Frame = +1

Query: 289 VVGGKPSQPTAWPWTVAIYRNGMFHCGGVIITQNWVISAAHCVH 420
           VV  +P+    WP T    R+G  HCG           AAH  H
Sbjct: 85  VVSQRPAHADPWPATTGGSRSGGVHCGRGFPATAASARAAHTPH 128


>07_01_0049 + 382526-383031,383385-384000
          Length = 373

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 15/32 (46%), Positives = 18/32 (56%)
 Frame = -1

Query: 695 PQPTAVQIVPGDGPHNQSGPAVSGPGKHIGRT 600
           P  TAVQ+V G GP + + P    PG H G T
Sbjct: 41  PGQTAVQVVNGTGPLHPAMP----PGSHFGDT 68


>01_05_0013 -
           17156017-17157647,17157977-17158144,17160064-17160113,
           17160796-17160833,17161102-17161212
          Length = 665

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +1

Query: 220 NYWRNRNELNRPWYIRNMRSESRVVGGKPSQPT 318
           N W+ R  ++ PW   N R +        SQPT
Sbjct: 82  NDWKARANVSIPWDASNQRQQQAAAANPTSQPT 114


>01_01_0151 - 1346942-1347682
          Length = 246

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = +1

Query: 619 PGPDTAGPDWLWGPSPGTICTAVGWG 696
           PGP     D  WG  PG +CT   WG
Sbjct: 159 PGPLIC-EDVYWGADPGPLCTPRPWG 183


>01_06_0877 +
           32662978-32663179,32663718-32663951,32664080-32664143,
           32664250-32664379,32664483-32664624,32664806-32665063,
           32665168-32665252,32665609-32665711,32666281-32666406,
           32666476-32666589,32666769-32666887,32666993-32667080,
           32667154-32667246,32667325-32667414,32667522-32667641,
           32667782-32667877
          Length = 687

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/46 (30%), Positives = 22/46 (47%)
 Frame = -2

Query: 568 LVETSHFSYRLVCNAGLQSHVLLDGFVLAVKTRNAEAYLLELHSSD 431
           + E+SH +YR   NA   S + L   +   KT N +   LE+   +
Sbjct: 92  MAESSHAAYRKAINAAYISSIFLKFIIENAKTDNWQELSLEIDKDE 137


>01_01_0156 - 1364856-1365401
          Length = 181

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 12/26 (46%), Positives = 12/26 (46%)
 Frame = +1

Query: 619 PGPDTAGPDWLWGPSPGTICTAVGWG 696
           PGP     D  WG  PG  CT   WG
Sbjct: 94  PGPLICS-DVYWGADPGPFCTPRPWG 118


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,423,503
Number of Sequences: 37544
Number of extensions: 439988
Number of successful extensions: 1195
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1160
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1195
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)