Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11k01
         (698 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like p...    77   9e-15
U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like p...    68   6e-12
U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like pr...    44   1e-04
AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like...    34   0.085
Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical pr...    33   0.26 
Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical pr...    29   2.4  
U29377-2|AAA68713.4|  627|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U29377-1|AAZ94294.1|  773|Caenorhabditis elegans Hypothetical pr...    29   3.2  
Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical pr...    28   5.6  
U39848-2|AAT81211.1|  279|Caenorhabditis elegans Hypothetical pr...    27   9.8  
AC024831-7|AAY86310.1|  711|Caenorhabditis elegans Hypothetical ...    27   9.8  

>U29380-14|AAA68746.2|  293|Caenorhabditis elegans Trypsin-like
           protease protein 1 protein.
          Length = 293

 Score = 77.4 bits (182), Expect = 9e-15
 Identities = 49/142 (34%), Positives = 68/142 (47%), Gaps = 3/142 (2%)
 Frame = +1

Query: 280 ESRVVGGKPSQPTAWPWTVAIY-RNGMFHCGGVIITQNWVISAAHCVHK-FWDHYYEVQA 453
           + R++GG  S P +WPWTV +  R G   CGG +I  N+V++AAHC  K      Y V+ 
Sbjct: 55  DHRLIGGSESSPHSWPWTVQLLSRLGHHRCGGSLIDPNFVLTAAHCFAKDRRPTSYSVRV 114

Query: 454 GMLRRFSFSPQEQNHQVTHVIVNQHYKQD-DMKNDLSLLRVEPIIQFSRWVRPICLPGPD 630
           G  R  S SP    H+VT V ++  Y        D +++R+ P +  S   RPICLP   
Sbjct: 115 GGHRSGSGSP----HRVTAVSIHPWYNIGFPSSYDFAIMRIHPPVNTSTTARPICLPSLP 170

Query: 631 TAGPDWLWGPSPGTICTAVGWG 696
                         +C   GWG
Sbjct: 171 AV---------ENRLCVVTGWG 183


>U58751-11|AAB00662.1|  265|Caenorhabditis elegans Trypsin-like
           protease protein 2 protein.
          Length = 265

 Score = 68.1 bits (159), Expect = 6e-12
 Identities = 46/142 (32%), Positives = 68/142 (47%), Gaps = 4/142 (2%)
 Frame = +1

Query: 283 SRVVGGKPSQPTAWPWTVAIYRNG--MFHCGGVIITQNWVISAAHCVHKFWD-HYYEVQA 453
           +RVVGG  + P A+PWT A+        HCG  I+ +  +I+AAHC  +      YEV  
Sbjct: 25  ARVVGGFETVPGAFPWTAALRNKATKAHHCGASILDKTHLITAAHCFEEDERVSSYEVVV 84

Query: 454 GMLRRFSFSPQEQNHQVTHVIVNQHYKQDDMKNDLSLLRVE-PIIQFSRWVRPICLPGPD 630
           G          EQ   +  +     YK D   +D+++L +  P I+F+ + +PICLP  D
Sbjct: 85  GDWDNNQTDGNEQIFYLQRIHFYPLYK-DIFSHDIAILEIPYPGIEFNEYAQPICLPSKD 143

Query: 631 TAGPDWLWGPSPGTICTAVGWG 696
                  +  +PG  C   GWG
Sbjct: 144 -------FVYTPGRQCVVSGWG 158


>U70848-2|AAB09110.4|  313|Caenorhabditis elegans Trypsin-like
           protease protein 3 protein.
          Length = 313

 Score = 43.6 bits (98), Expect = 1e-04
 Identities = 29/119 (24%), Positives = 55/119 (46%), Gaps = 3/119 (2%)
 Frame = +1

Query: 286 RVVGGKPSQPTA-WPWTVAIYR-NGM-FHCGGVIITQNWVISAAHCVHKFWDHYYEVQAG 456
           R++GG      A W   +  Y  NG    CG  +I   W+++AAHC  +      + ++ 
Sbjct: 37  RIIGGNSIDDGANWMAKLVSYGDNGQGILCGATVIDDFWLVTAAHCALQL-----QTRSF 91

Query: 457 MLRRFSFSPQEQNHQVTHVIVNQHYKQDDMKNDLSLLRVEPIIQFSRWVRPICLPGPDT 633
           +  R   + +E++  V    ++  Y      ND++LLR+   +     ++P+CL   D+
Sbjct: 92  VYVREPKNNRERSFSVKEAYIHSGYNNQTADNDIALLRISSDLS-KLGIKPVCLVHDDS 149


>AF003384-12|AAB54236.2|  331|Caenorhabditis elegans Trypsin-like
           protease protein 5 protein.
          Length = 331

 Score = 34.3 bits (75), Expect = 0.085
 Identities = 21/48 (43%), Positives = 24/48 (50%), Gaps = 6/48 (12%)
 Frame = +1

Query: 298 GKPSQPTAW-PWTVAIY---RNGMFH--CGGVIITQNWVISAAHCVHK 423
           G    PT   PW V I    R G F   CGG +IT   V++AAHC  K
Sbjct: 34  GNTGNPTHLAPWAVQIRVKARKGDFEVICGGTLITLKHVLTAAHCFQK 81


>Z92832-5|CAB07374.2|  292|Caenorhabditis elegans Hypothetical
           protein F31D4.6 protein.
          Length = 292

 Score = 32.7 bits (71), Expect = 0.26
 Identities = 18/48 (37%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
 Frame = +1

Query: 493 NHQVTHVIVNQHYKQDD-MK-NDLSLLRVEPIIQFSRWVRPICLPGPD 630
           +++V  V+V+  +   + +K +D +++ VE  I FS  VRPICLP P+
Sbjct: 122 HNKVRAVLVDGEFASSNCLKGHDWAIVEVEKRIHFSENVRPICLPRPN 169



 Score = 28.7 bits (61), Expect = 4.2
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 322 WPWTVAIYRNGMFHCGGVIITQNWVISAAH 411
           +PW V+   +G+   GG II+   +I+AAH
Sbjct: 28  FPWAVSFTVDGVNRLGGSIISPYHIITAAH 57


>Z78013-9|CAB01420.2|  297|Caenorhabditis elegans Hypothetical
           protein F15B9.5 protein.
          Length = 297

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +1

Query: 364 CGGVIITQNWVISAAHCV 417
           CGGV+I  + VI++AHCV
Sbjct: 46  CGGVLIAPSIVITSAHCV 63


>U29377-2|AAA68713.4|  627|Caenorhabditis elegans Hypothetical
           protein K05F1.6b protein.
          Length = 627

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +2

Query: 359 FIVVELLSLKTGLYLLRIAYINFG 430
           FI+V +LS+ +G Y+L +A++ FG
Sbjct: 416 FIIVAMLSMVSGHYMLALAFMYFG 439


>U29377-1|AAZ94294.1|  773|Caenorhabditis elegans Hypothetical
           protein K05F1.6a protein.
          Length = 773

 Score = 29.1 bits (62), Expect = 3.2
 Identities = 11/24 (45%), Positives = 19/24 (79%)
 Frame = +2

Query: 359 FIVVELLSLKTGLYLLRIAYINFG 430
           FI+V +LS+ +G Y+L +A++ FG
Sbjct: 562 FIIVAMLSMVSGHYMLALAFMYFG 585


>Z83217-4|CAB05683.2| 1178|Caenorhabditis elegans Hypothetical
           protein C10C6.6 protein.
          Length = 1178

 Score = 28.3 bits (60), Expect = 5.6
 Identities = 12/42 (28%), Positives = 20/42 (47%)
 Frame = +1

Query: 550 NDLSLLRVEPIIQFSRWVRPICLPGPDTAGPDWLWGPSPGTI 675
           N L+   V  +++F++   P  +      G DW+W    GTI
Sbjct: 703 NPLTACHVSKVLKFTKKSLPTLVLDEPADGVDWMWKSVDGTI 744


>U39848-2|AAT81211.1|  279|Caenorhabditis elegans Hypothetical
           protein B0286.6 protein.
          Length = 279

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = +1

Query: 550 NDLSLLRVEPIIQFSRWVRPICLP 621
           ND+++  +E  I+FS+ + P CLP
Sbjct: 121 NDIAVFELEEPIEFSKDIFPACLP 144


>AC024831-7|AAY86310.1|  711|Caenorhabditis elegans Hypothetical
           protein Y55F3C.9 protein.
          Length = 711

 Score = 27.5 bits (58), Expect = 9.8
 Identities = 15/50 (30%), Positives = 23/50 (46%)
 Frame = +1

Query: 355 MFHCGGVIITQNWVISAAHCVHKFWDHYYEVQAGMLRRFSFSPQEQNHQV 504
           +FHCGGVII    + + A     +W    E + G+L  F       +H +
Sbjct: 141 LFHCGGVIILLAALFNTA---IPYWIREQERKEGLLFHFESYYNRSHHMI 187


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,421,583
Number of Sequences: 27780
Number of extensions: 391606
Number of successful extensions: 968
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 923
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)