Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11k01
         (698 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    54   1e-09
L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.          23   2.1  
AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine beta-sy...    23   2.8  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   6.4  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    21   8.5  
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    21   8.5  
AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.           21   8.5  
AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.           21   8.5  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 54.0 bits (124), Expect = 1e-09
 Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 12/128 (9%)
 Frame = +1

Query: 274 RSESRVVGGKPSQPTAWPWTVAI---YRNGMFHCGGVIITQNWVISAAHCVHKFWDHYYE 444
           ++ SR+VGG  +    +P    I   Y  GM  CG  II++ +V++AAHC+    D    
Sbjct: 156 KNPSRIVGGTNTGINEFPMMAGIKRTYEPGMI-CGATIISKRYVLTAAHCII---DENTT 211

Query: 445 VQAGMLRRFSFSPQEQN-----HQVTHVIVNQHY---KQDDMK-NDLSLLRVEPIIQFSR 597
             A ++    +S + +      H +  VI++  Y   ++DD + ND++LL+ E  I+F  
Sbjct: 212 KLAIVVGEHDWSSKTETNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGD 271

Query: 598 WVRPICLP 621
            V P CLP
Sbjct: 272 KVGPACLP 279


>L10433-1|AAA27732.1|  149|Apis mellifera transposase protein.
          Length = 149

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
 Frame = +3

Query: 282 KPSGWWKT--KSTHGLAMDGSHIQKRHVSLWWSY 377
           K   WW    +     +  G H +K  +S+WW Y
Sbjct: 41  KRKRWWSRPREPAQTTSKAGIHRKKVLLSVWWDY 74


>AB244761-1|BAE66603.1|  504|Apis mellifera cystathionine
           beta-synthase protein.
          Length = 504

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +3

Query: 3   LLQLFRRLRHLPRSAMWHSSPKHVTATER 89
           L  L  ++   P  A WHS   H++  ++
Sbjct: 140 LYALGAKIIRTPTEASWHSPEAHISVAQK 168


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +3

Query: 333 GSHIQKRHVSLWWSY 377
           G H +K  +S+WW Y
Sbjct: 182 GIHRKKVLLSVWWDY 196


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = +1

Query: 151 PYPFMFFGNRQKRSLVYHNYDLL 219
           PYP +FF    +R  +++  +L+
Sbjct: 221 PYPDIFFNITLRRKTLFYTVNLI 243


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 10/30 (33%), Positives = 17/30 (56%)
 Frame = -3

Query: 399 YNPVLSDNNSTTMKHAVSVYGYRPWPSRGL 310
           Y  V+++ N+T+MK  V ++       RGL
Sbjct: 485 YTIVINNRNNTSMKGTVRIFIGPKEDERGL 514


>AM158085-1|CAJ43389.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 361 HCGGVIITQNWVISAAH 411
           HC GVI   N VI   H
Sbjct: 85  HCAGVITALNNVIDFLH 101


>AM158084-1|CAJ43388.1|  171|Apis mellifera globin 1 protein.
          Length = 171

 Score = 21.4 bits (43), Expect = 8.5
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +1

Query: 361 HCGGVIITQNWVISAAH 411
           HC GVI   N VI   H
Sbjct: 85  HCAGVITALNNVIDFLH 101


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 216,013
Number of Sequences: 438
Number of extensions: 5112
Number of successful extensions: 13
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)