Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11j24
(602 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 144 3e-35
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 131 4e-31
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 108 3e-24
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 107 5e-24
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 107 5e-24
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 107 5e-24
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 91 6e-19
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 91 6e-19
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 91 6e-19
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 68 6e-12
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 68 6e-12
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 68 6e-12
AC024793-5|AAF60689.1| 79|Caenorhabditis elegans Hypothetical ... 51 6e-07
U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene... 47 1e-05
U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprote... 47 1e-05
Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical pr... 46 2e-05
DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding p... 46 2e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 44 6e-05
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 44 6e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 44 6e-05
U97193-2|AAB52444.1| 137|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF106588-2|AAC78488.1| 137|Caenorhabditis elegans Hypothetical ... 42 3e-04
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 42 4e-04
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 42 4e-04
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 42 4e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 41 6e-04
AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger t... 41 8e-04
U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle orienta... 40 0.001
AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein. 40 0.001
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 40 0.001
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 40 0.002
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 39 0.003
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 38 0.006
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 38 0.006
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 38 0.006
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 38 0.006
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 37 0.010
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 37 0.010
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 37 0.010
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 37 0.010
U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna b... 37 0.010
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 37 0.010
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 37 0.010
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 37 0.010
Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical pr... 37 0.013
U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein. 37 0.013
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 36 0.017
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 36 0.017
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 36 0.017
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 36 0.017
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 36 0.017
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 36 0.017
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 36 0.017
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 36 0.017
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 36 0.017
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 36 0.017
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 36 0.022
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 36 0.022
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 36 0.022
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 36 0.029
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 35 0.039
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 35 0.051
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 35 0.051
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 35 0.051
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 35 0.051
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 34 0.068
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 34 0.068
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 34 0.068
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 34 0.090
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 34 0.090
Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical pr... 33 0.12
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 33 0.12
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 33 0.16
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 33 0.21
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 32 0.27
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 32 0.27
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 32 0.36
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 32 0.36
Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical pr... 31 0.63
Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical p... 31 0.63
Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical pr... 31 0.63
X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein. 31 0.63
X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein. 31 0.63
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 31 0.63
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 31 0.63
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 31 0.63
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 31 0.84
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 31 0.84
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 31 0.84
AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical... 30 1.1
AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical... 30 1.1
AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding p... 30 1.1
AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding p... 30 1.1
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 30 1.1
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 30 1.5
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 30 1.5
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 30 1.5
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 29 1.9
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 29 1.9
U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna b... 29 1.9
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 29 1.9
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 29 1.9
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 29 1.9
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 29 1.9
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z50176-3|CAA90540.1| 196|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 28 4.5
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 28 4.5
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 28 5.9
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 28 5.9
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 28 5.9
Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical pr... 27 7.8
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 27 7.8
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 27 7.8
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 27 7.8
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 144 bits (350), Expect = 3e-35
Identities = 68/149 (45%), Positives = 103/149 (69%), Gaps = 6/149 (4%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLG 351
RVY+G LP +RD+E FF+G+G++ D+++KNG+GFV+F+D RDADDAV++LNGKEL G
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIMKNGFGFVDFQDQRDADDAVHDLNGKELCG 62
Query: 352 ERVVVE-PARGI----DRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVENLSSR 516
ERV++E P R + +RS +R + P T +RL+++NLS+R
Sbjct: 63 ERVILEFPRRKVGYNEERSGSGFRGREPTFRKGGERQFSNRYSRPCSTRFRLVIDNLSTR 122
Query: 517 ISWQDLKDYMRQAG-EVTYADAHKQHRNE 600
SWQD+KD++R+ G E TY++AHK++ N+
Sbjct: 123 YSWQDIKDHIRKLGIEPTYSEAHKRNVNQ 151
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 131 bits (316), Expect = 4e-31
Identities = 74/164 (45%), Positives = 103/164 (62%), Gaps = 22/164 (13%)
Frame = +1
Query: 163 VGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKE 342
+ +R+Y+G L V E+D+E FF+G+G+IRD+L+KNG+GFVEF+D RDA+DAV++LNGKE
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 343 LLGERVVVEPARGIDRSADR--YRRGDR----------HXXXXXXXXXXXXXXPPTR--- 477
L GERV+++ ++ DR + G R PP R
Sbjct: 61 LGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESR 120
Query: 478 ------TEYRLIVENLSSRISWQDLKDYMRQAG-EVTYADAHKQ 588
T +R++VENLSSRISWQDLKD +R+ G E TYA+AHK+
Sbjct: 121 YGRPYSTRHRVVVENLSSRISWQDLKDQVRRQGVEPTYAEAHKR 164
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 108 bits (259), Expect = 3e-24
Identities = 66/144 (45%), Positives = 82/144 (56%), Gaps = 9/144 (6%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYG----FVEFEDYRDADDAVYELNGK 339
+VYVG LP VRE+++E F +GRI+ + IK+G G FVEFED+RDA+DAV +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 340 ELLGERVVVEPARGIDRSADRYRR----GD-RHXXXXXXXXXXXXXXPPTRTEYRLIVEN 504
E G R+ VE RG+ R GD R P RT YR+IVE
Sbjct: 70 EFDGRRIRVEFTRGVGPRGPSGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVEG 129
Query: 505 LSSRISWQDLKDYMRQAGEVTYAD 576
L SWQDLKD+MR AG+V YAD
Sbjct: 130 LPPTGSWQDLKDHMRDAGDVCYAD 153
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 157 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRI--RDILIKNGYGFVEFEDYRDADDAVYEL 330
+ G RV V GLP +DL+ + G + D+ ++G G VEF Y D AV +L
Sbjct: 119 RRTGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVA-RDGTGVVEFTRYEDVKYAVRKL 177
Query: 331 N 333
+
Sbjct: 178 D 178
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 107 bits (258), Expect = 5e-24
Identities = 63/150 (42%), Positives = 88/150 (58%), Gaps = 21/150 (14%)
Frame = +1
Query: 163 VGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKE 342
+ +R+Y+G L V E+D+E FF+G+G+IRD+L+KNG+GFVEF+D RDA+DAV++LNGKE
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 343 LLGERVVVEPARGIDRSADR--YRRGDR----------HXXXXXXXXXXXXXXPPTR--- 477
L GERV+++ ++ DR + G R PP R
Sbjct: 61 LGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESR 120
Query: 478 ------TEYRLIVENLSSRISWQDLKDYMR 549
T +R++VENLSSRISWQ K R
Sbjct: 121 YGRPYSTRHRVVVENLSSRISWQVCKTKRR 150
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 107 bits (258), Expect = 5e-24
Identities = 62/146 (42%), Positives = 87/146 (59%), Gaps = 21/146 (14%)
Frame = +1
Query: 163 VGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKE 342
+ +R+Y+G L V E+D+E FF+G+G+IRD+L+KNG+GFVEF+D RDA+DAV++LNGKE
Sbjct: 1 MAARIYIGRLTSRVSEKDIEHFFRGYGQIRDVLLKNGFGFVEFDDKRDAEDAVHDLNGKE 60
Query: 343 LLGERVVVEPARGIDRSADR--YRRGDR----------HXXXXXXXXXXXXXXPPTR--- 477
L GERV+++ ++ DR + G R PP R
Sbjct: 61 LGGERVILDYSKPRGGGGDRGGFGGGGRGGARVSSYSGGGGGGRDRFDRYDRGPPRRESR 120
Query: 478 ------TEYRLIVENLSSRISWQDLK 537
T +R++VENLSSRISWQ K
Sbjct: 121 YGRPYSTRHRVVVENLSSRISWQQEK 146
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 107 bits (258), Expect = 5e-24
Identities = 66/144 (45%), Positives = 82/144 (56%), Gaps = 9/144 (6%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYG----FVEFEDYRDADDAVYELNGK 339
+VYVG LP VRE+++E F +GRI+ + IK+G G FVEFED+RDA+DAV +G
Sbjct: 10 KVYVGNLPGDVREKEVEDIFHKYGRIKYVDIKSGRGPAFAFVEFEDHRDAEDAVRARDGY 69
Query: 340 ELLGERVVVEPARGIDRSADRYRR----GD-RHXXXXXXXXXXXXXXPPTRTEYRLIVEN 504
E G R+ VE RG+ R GD R P RT YR+IVE
Sbjct: 70 EFDGRRIRVEFTRGVGPRGPGGRPLQDGGDHRGGDFRGGRGGGRGGGPQRRTGYRVIVEG 129
Query: 505 LSSRISWQDLKDYMRQAGEVTYAD 576
L SWQDLKD+MR AG+V YAD
Sbjct: 130 LPPTGSWQDLKDHMRDAGDVCYAD 153
Score = 29.5 bits (63), Expect = 1.9
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = +1
Query: 157 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRI--RDILIKNGYGFVEFEDYRDADDAVYEL 330
+ G RV V GLP +DL+ + G + D+ ++G G VEF Y D AV +L
Sbjct: 119 RRTGYRVIVEGLPPTGSWQDLKDHMRDAGDVCYADVA-RDGTGVVEFTRYEDVKYAVRKL 177
Query: 331 N 333
+
Sbjct: 178 D 178
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 91.1 bits (216), Expect = 6e-19
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLG 351
R+Y+G +P+ RERD+E+F KG+G+I +I +K G+ FV+FED RDA+DA ++L+GK + G
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEG 62
Query: 352 E--RVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTR 477
R+VVE ARG R DR+ G R PP R
Sbjct: 63 SSMRLVVEMARGKPRGNDRH--GSRSPRRRSRSPRRRSRTPPRR 104
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 91.1 bits (216), Expect = 6e-19
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLG 351
R+Y+G +P+ RERD+E+F KG+G+I +I +K G+ FV+FED RDA+DA ++L+GK + G
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEG 62
Query: 352 E--RVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTR 477
R+VVE ARG R DR+ G R PP R
Sbjct: 63 SSMRLVVEMARGKPRGNDRH--GSRSPRRRSRSPRRRSRTPPRR 104
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 91.1 bits (216), Expect = 6e-19
Identities = 46/104 (44%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLG 351
R+Y+G +P+ RERD+E+F KG+G+I +I +K G+ FV+FED RDA+DA ++L+GK + G
Sbjct: 3 RLYLGKIPYNARERDVERFLKGYGKINNISMKYGFAFVDFEDSRDAEDACHDLDGKTMEG 62
Query: 352 E--RVVVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTR 477
R+VVE ARG R DR+ G R PP R
Sbjct: 63 SSMRLVVEMARGKPRGNDRH--GSRSPRRRSRSPRRRSRTPPRR 104
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 67.7 bits (158), Expect = 6e-12
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN---GYGFVEFEDYRDADDAVYELNGK 339
++VYVGGLP ++LE+ F FGRIR + + G+ FVE++D RDA+DAV L+G
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 340 ELLGERVVVEPARG 381
+ G R VE + G
Sbjct: 63 RICGVRARVELSTG 76
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 67.7 bits (158), Expect = 6e-12
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN---GYGFVEFEDYRDADDAVYELNGK 339
++VYVGGLP ++LE+ F FGRIR + + G+ FVE++D RDA+DAV L+G
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 340 ELLGERVVVEPARG 381
+ G R VE + G
Sbjct: 63 RICGVRARVELSTG 76
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 67.7 bits (158), Expect = 6e-12
Identities = 33/74 (44%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN---GYGFVEFEDYRDADDAVYELNGK 339
++VYVGGLP ++LE+ F FGRIR + + G+ FVE++D RDA+DAV L+G
Sbjct: 3 AKVYVGGLPSDATSQELEEIFDRFGRIRKVWVARRPPGFAFVEYDDVRDAEDAVRALDGS 62
Query: 340 ELLGERVVVEPARG 381
+ G R VE + G
Sbjct: 63 RICGVRARVELSTG 76
>AC024793-5|AAF60689.1| 79|Caenorhabditis elegans Hypothetical
protein Y48G1BL.4 protein.
Length = 79
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN--GYGFVEFEDYRDADDAVYELNGKEL 345
RVY+G P +RD E FF +G++ D ++KN G G +F+D DADD + + + L
Sbjct: 3 RVYIGRFPNRASDRDAEHFFCDYGKLPDAIMKNVFGVGCKDFQDQSDADDIICDEQTRIL 62
Query: 346 LGERV 360
L E++
Sbjct: 63 LVEKL 67
>U41531-7|AAA83161.2| 415|Caenorhabditis elegans Feminizing gene on
x protein 1 protein.
Length = 415
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYELN 333
R++V +PF R+ DL+ F+ FG + D+ I G+GFV E +DA+ A EL+
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELH 213
Query: 334 GKELLGERVVVEPA 375
G + G ++ V A
Sbjct: 214 GSMIEGRKIEVNCA 227
>U14946-1|AAA67723.1| 415|Caenorhabditis elegans ribonucleoprotein
protein.
Length = 415
Score = 46.8 bits (106), Expect = 1e-05
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 6/74 (8%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYELN 333
R++V +PF R+ DL+ F+ FG + D+ I G+GFV E +DA+ A EL+
Sbjct: 154 RLHVSNIPFRFRDPDLKTMFEKFGVVSDVEIIFNERGSKGFGFVTMERPQDAERARQELH 213
Query: 334 GKELLGERVVVEPA 375
G + G ++ V A
Sbjct: 214 GSMIEGRKIEVNCA 227
>Z36238-3|CAA85276.1| 404|Caenorhabditis elegans Hypothetical
protein R74.5a protein.
Length = 404
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYELN 333
R++V +PF RE DL F+ G + D+ I G+GFV ++ DAD A E N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160
Query: 334 GKELLGERVVVEPA 375
G + G RV V A
Sbjct: 161 GTTIEGRRVEVNLA 174
>DQ485531-1|ABF22491.1| 404|Caenorhabditis elegans RNA-binding
protein ASD-1 protein.
Length = 404
Score = 46.0 bits (104), Expect = 2e-05
Identities = 28/74 (37%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYELN 333
R++V +PF RE DL F+ G + D+ I G+GFV ++ DAD A E N
Sbjct: 101 RLHVSNIPFKYREPDLTAMFEKVGPVVDVEIIFNERGSKGFGFVTMQNPDDADRARAEFN 160
Query: 334 GKELLGERVVVEPA 375
G + G RV V A
Sbjct: 161 GTTIEGRRVEVNLA 174
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 44.4 bits (100), Expect = 6e-05
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 8/77 (10%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKN--------GYGFVEFEDYRDADDAVYEL 330
V+VG + + V E + F G + I + + GYGF+EF D + A+ A+ L
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAEVAIRNL 79
Query: 331 NGKELLGERVVVEPARG 381
NG EL G + V+ A G
Sbjct: 80 NGYELSGRILRVDSAAG 96
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 44.4 bits (100), Expect = 6e-05
Identities = 26/75 (34%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 330
VYVG PF E +L FF G+I ++ I G+ F+EF + A AV ++
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQM 66
Query: 331 NGKELLGERVVVEPA 375
NG E G + V A
Sbjct: 67 NGAEFNGRPLRVNLA 81
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 44.4 bits (100), Expect = 6e-05
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Frame = +1
Query: 157 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--KNGYGFVEFEDYRDADDAVYEL 330
K + VYVG + + DL F +G I ++ I Y FV +E A A+ E+
Sbjct: 233 KADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIFKTQRYAFVRYEKKECATKAIMEM 292
Query: 331 NGKELLGERV 360
NGKE+ G +V
Sbjct: 293 NGKEMAGNQV 302
Score = 37.5 bits (83), Expect = 0.007
Identities = 26/71 (36%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGR------IRDILIKN--GYGFVEFEDYRDADDAVYEL 330
V+VG L V L+ F FG IRD+ + GYGFV F + ++A++A+ +
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIAGM 196
Query: 331 NGKELLGERVV 363
NGK +G+R V
Sbjct: 197 NGK-WIGKRAV 206
>U97193-2|AAB52444.1| 137|Caenorhabditis elegans Hypothetical
protein C06A5.5 protein.
Length = 137
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYR-DADDAVYELNGKELL 348
RVY+G P + D E FF G+ ++ D ++KN +G YR DADD +++ + LL
Sbjct: 3 RVYIGRFPNRASDHDAEHFFCGYEKLPDAIMKNIFGV----GYRSDADDIIFDEQRRILL 58
Query: 349 GER 357
E+
Sbjct: 59 VEK 61
>AF106588-2|AAC78488.1| 137|Caenorhabditis elegans Hypothetical
protein Y76G2A.1 protein.
Length = 137
Score = 41.9 bits (94), Expect = 3e-04
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYR-DADDAVYELNGKELL 348
RVY+G P + D E FF G+ ++ D ++KN +G YR DADD +++ + LL
Sbjct: 3 RVYIGRFPNRASDHDAEHFFCGYEKLPDAIMKNIFGV----GYRSDADDIIFDEQRRILL 58
Query: 349 GER 357
E+
Sbjct: 59 VEK 61
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 41.5 bits (93), Expect = 4e-04
Identities = 27/81 (33%), Positives = 37/81 (45%), Gaps = 8/81 (9%)
Frame = +1
Query: 160 MVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADD 315
M G VYVG PF E DL +F G + ++ I G+ FVEF + A
Sbjct: 1 MSGFSVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQR 60
Query: 316 AVYELNGKELLGERVVVEPAR 378
AV + NG + G + V A+
Sbjct: 61 AVDQFNGVDFNGRALRVNLAQ 81
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Frame = +1
Query: 154 WKMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKN------GYGFVEFEDYRDAD 312
++++ +R++VGG P E +L + F+ F ++D+ ++K+ GYGF+ FE D
Sbjct: 61 YELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFET-EDQA 119
Query: 313 DAVYELNGKEL 345
+ + +L K+L
Sbjct: 120 EEIRKLTPKQL 130
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 41.5 bits (93), Expect = 4e-04
Identities = 21/71 (29%), Positives = 42/71 (59%), Gaps = 7/71 (9%)
Frame = +1
Query: 154 WKMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKN------GYGFVEFEDYRDAD 312
++++ +R++VGG P E +L + F+ F ++D+ ++K+ GYGF+ FE D
Sbjct: 62 YELIPNRIFVGGFPTSTTETELREHFEKFFAVKDVKMVKSLDGQSKGYGFITFET-EDQA 120
Query: 313 DAVYELNGKEL 345
+ + +L K+L
Sbjct: 121 EEIRKLTPKQL 131
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 41.1 bits (92), Expect = 6e-04
Identities = 26/65 (40%), Positives = 35/65 (53%), Gaps = 8/65 (12%)
Frame = +1
Query: 166 GSRVYVGGLPFGVRERDLEKFFKGFGRI--RDILIKN------GYGFVEFEDYRDADDAV 321
GS +YV G+P + +LE F+ FG+I IL N G GFV F+ +AD A+
Sbjct: 127 GSNLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAI 186
Query: 322 YELNG 336
LNG
Sbjct: 187 KTLNG 191
Score = 31.9 bits (69), Expect = 0.36
Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKN-------GYGFVEFEDYRDADDAVY 324
+ + + LP G+ + ++ F G I L+++ GYGFV + DA AV
Sbjct: 42 TNLIINYLPQGMTQEEVRSLFTSIGEIESCKLVRDKVTGQSLGYGFVNYVREEDALRAVS 101
Query: 325 ELNGKELLGERVVVEPAR 378
NG L + + V AR
Sbjct: 102 SFNGLRLQNKTIKVSYAR 119
Score = 30.7 bits (66), Expect = 0.84
Identities = 15/41 (36%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +1
Query: 247 IRDILIK-NGYGFVEFEDYRDADDAVYELNGKELLGERVVV 366
+RD+ + GY FV +Y +A +A+ LNG L G+ + V
Sbjct: 406 LRDLTQQCKGYAFVSMSNYTEAYNAMLSLNGTNLAGKTLQV 446
>AF098993-1|AAC67471.2| 367|Caenorhabditis elegans Zinc finger
transcription factorfamily protein 4 protein.
Length = 367
Score = 40.7 bits (91), Expect = 8e-04
Identities = 20/62 (32%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Frame = +1
Query: 160 MVGSRVYVGGLPFGVRERD-LEKFFKGFGRIRDI--LIKNGYGFVEFEDYRDADDAVYEL 330
M+ +RV++G + + RD + + F+ FG+I + + G+GFV+F + AD++ L
Sbjct: 80 MIRARVFIGNIARAIITRDDIIELFRPFGKIIAVNYFAQQGFGFVQFNEAGSADESCRSL 139
Query: 331 NG 336
NG
Sbjct: 140 NG 141
>U55363-5|AAA97963.1| 351|Caenorhabditis elegans Spindle
orientation defective protein4 protein.
Length = 351
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYEL 330
+R+YV +PF RE+DL F +GR+ + I G+GFV + + A L
Sbjct: 51 NRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAAL 110
Query: 331 NGKELLGERVVVEPA 375
+ + G + V A
Sbjct: 111 HESHVQGRIIEVRRA 125
>AB052819-1|BAC65239.1| 351|Caenorhabditis elegans PIP-1 protein.
Length = 351
Score = 40.3 bits (90), Expect = 0.001
Identities = 22/75 (29%), Positives = 35/75 (46%), Gaps = 6/75 (8%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILI------KNGYGFVEFEDYRDADDAVYEL 330
+R+YV +PF RE+DL F +GR+ + I G+GFV + + A L
Sbjct: 51 NRIYVSNIPFSFREQDLAAMFFAYGRVLSVEIVTNDRGSKGFGFVTLDSIESCEKARAAL 110
Query: 331 NGKELLGERVVVEPA 375
+ + G + V A
Sbjct: 111 HESHVQGRIIEVRRA 125
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 39.9 bits (89), Expect = 0.001
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = +1
Query: 166 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 321
G VYVG +P+ E ++ +F G + ++ I G+ FVEF + A AV
Sbjct: 5 GFSVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAV 64
Query: 322 YELNGKELLGERVVVEPA 375
+LNG G + V A
Sbjct: 65 EQLNGVAFNGRNLRVNYA 82
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 39.5 bits (88), Expect = 0.002
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 8/63 (12%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVY 324
++++VGGLP+ ++ L ++F+ FG I + ++ GYGFV +D A+ A
Sbjct: 35 TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACK 94
Query: 325 ELN 333
+ N
Sbjct: 95 DPN 97
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 38.7 bits (86), Expect = 0.003
Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVYEL 330
+YVGG V E+ L F FG + I I G+GFVEF+ DA A+ +
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAIDNM 72
Query: 331 NGKELLGERVVVEPAR 378
N EL G+ + V AR
Sbjct: 73 NESELFGKTIRVNFAR 88
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/76 (26%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKN-------GYGFVEFEDYRDADDAVYELN 333
++VG + + E L + F+ +G+I+ + + + GY F+E+ D + A + +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTMVHDEAGKPRGYAFIEYSDKAEMHTAYKKAD 165
Query: 334 GKELLGERVVVEPARG 381
G ++ G+R+VV+ RG
Sbjct: 166 GIKVDGKRLVVDYERG 181
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDI--------LIKNGYGFVEFEDYRDADDA 318
+V+VGGLP E+DL F+ FG++ DI + + F+ FE+ AD A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 37.9 bits (84), Expect = 0.006
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDI--------LIKNGYGFVEFEDYRDADDA 318
+V+VGGLP E+DL F+ FG++ DI + + F+ FE+ AD A
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 37.9 bits (84), Expect = 0.006
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK----NGYGFVEFEDYRDADDAVYELNG 336
S V+V G+ + + +L ++ FG I D +++ +GYGFV F+ +A + E++G
Sbjct: 96 SNVFVRGISRDMPDTEL---YQAFGGITDGVVQCHVADGYGFVLFDTRANAQKKIVEMDG 152
Query: 337 KELLGERVVVEPAR 378
K L G+ + V AR
Sbjct: 153 KTLNGKLISVSWAR 166
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/73 (28%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVYEL 330
V+V + E D+ F +G+I++I + GY VE+E ++A++A+ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 331 NGKELLGERVVVE 369
N +LLG+ V V+
Sbjct: 117 NDTDLLGQNVKVD 129
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK-------NGYGFVEFEDYRDADDAVYE 327
+++++GGLP + E +++ FG ++ + GY F E+ D D A+
Sbjct: 291 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 350
Query: 328 LNGKELLGERVVVEPA 375
LNG +L +++VV+ A
Sbjct: 351 LNGMQLGDKQLVVQLA 366
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 37.1 bits (82), Expect = 0.010
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +1
Query: 181 VGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYELNG 336
+ L + DL + F+ +G I D+ I G+GFV F + RDA+ A+ +G
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82
Query: 337 KELLGERVVVEPARGIDRSADRYRRGDR 420
K + G + V A+ DR +D RG R
Sbjct: 83 KLVDGRELRVTLAK-YDRPSD--ERGGR 107
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 37.1 bits (82), Expect = 0.010
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Frame = +1
Query: 181 VGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYELNG 336
+ L + DL + F+ +G I D+ I G+GFV F + RDA+ A+ +G
Sbjct: 23 IDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDRTDG 82
Query: 337 KELLGERVVVEPARGIDRSADRYRRGDR 420
K + G + V A+ DR +D RG R
Sbjct: 83 KLVDGRELRVTLAK-YDRPSD--ERGGR 107
>U00052-10|AAK21429.2| 289|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 5 protein.
Length = 289
Score = 37.1 bits (82), Expect = 0.010
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 9/79 (11%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDI---------LIKNGYGFVEFEDYRDADDAVY 324
RV + L V + LE+ F +G I+++ + GYG+VE+++ DA+ ++
Sbjct: 134 RVVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIK 193
Query: 325 ELNGKELLGERVVVEPARG 381
++G ++ G V VE G
Sbjct: 194 HMDGGQIDGMAVHVEMTIG 212
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK-------NGYGFVEFEDYRDADDAVYE 327
+++++GGLP + E +++ FG ++ + GY F E+ D D A+
Sbjct: 291 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 350
Query: 328 LNGKELLGERVVVEPA 375
LNG +L +++VV+ A
Sbjct: 351 LNGMQLGDKQLVVQLA 366
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK-------NGYGFVEFEDYRDADDAVYE 327
+++++GGLP + E +++ FG ++ + GY F E+ D D A+
Sbjct: 266 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 325
Query: 328 LNGKELLGERVVVEPA 375
LNG +L +++VV+ A
Sbjct: 326 LNGMQLGDKQLVVQLA 341
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 37.1 bits (82), Expect = 0.010
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 7/76 (9%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK-------NGYGFVEFEDYRDADDAVYE 327
+++++GGLP + E +++ FG ++ + GY F E+ D D A+
Sbjct: 269 NKIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNSKGYAFAEYLDPTLTDQAIAG 328
Query: 328 LNGKELLGERVVVEPA 375
LNG +L +++VV+ A
Sbjct: 329 LNGMQLGDKQLVVQLA 344
>Z78019-5|CAB01455.1| 305|Caenorhabditis elegans Hypothetical
protein ZK863.7 protein.
Length = 305
Score = 36.7 bits (81), Expect = 0.013
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELL 348
S+++VG LP V L++ F+ F ++ + I Y FV E+ D D + L G +
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEE-DDVDPIITRLTGYTID 61
Query: 349 GERVVVE 369
G+ V ++
Sbjct: 62 GKVVNIK 68
>U21302-2|AAA92287.1| 305|Caenorhabditis elegans RNP-1 protein.
Length = 305
Score = 36.7 bits (81), Expect = 0.013
Identities = 20/67 (29%), Positives = 35/67 (52%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELL 348
S+++VG LP V L++ F+ F ++ + I Y FV E+ D D + L G +
Sbjct: 3 SKLFVGNLPDNVDSNKLKQVFQPFCKVTECDIVKNYAFVHIEE-DDVDPIITRLTGYTID 61
Query: 349 GERVVVE 369
G+ V ++
Sbjct: 62 GKVVNIK 68
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 36.3 bits (80), Expect = 0.017
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRI------RDILIKN--GYGFVEFEDYRDADDAVYEL 330
+YVGGL V E L + G + +D + N G+GFVEF DAD A+ L
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 331 NGKELLGERVVVEPARGIDRSAD 399
N +L G+ + V A +++ D
Sbjct: 75 NMIKLYGKPIKVNKASAHEKNMD 97
Score = 36.3 bits (80), Expect = 0.017
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +1
Query: 163 VGSRVYVGGLPFGVRERDLEKFFKGFGRI-------RDI--LIKNGYGFVEFEDYRDADD 315
VG+ ++VG L V E+ L F FG I RD+ G+ F+ F + +D
Sbjct: 98 VGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDT 157
Query: 316 AVYELNGKELLGERVVVEPARGIDRSADRY 405
A+ +NG+ L + V A D +R+
Sbjct: 158 ALEAMNGQFLCNRAITVSYAFKRDSKGERH 187
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 330
V+VG L V + L + F+ FG + D + GYGFV + +A+ A+ ++
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 331 NGKELLGERVV 363
NG + LG R +
Sbjct: 84 NG-QWLGRRTI 93
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 330
V+VG L V + L + F+ FG + D + GYGFV + +A+ A+ ++
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 331 NGKELLGERVV 363
NG + LG R +
Sbjct: 94 NG-QWLGRRTI 103
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 330
V+VG L V + L + F+ FG + D + GYGFV + +A+ A+ ++
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 331 NGKELLGERVV 363
NG + LG R +
Sbjct: 197 NG-QWLGRRTI 206
Score = 31.1 bits (67), Expect = 0.63
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRI-RDILIKNG----YGFVEFEDYRDADDAVYELNGK 339
+YVG L V E + F G + + +I +G Y FVEF D+ A A+ +N +
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDGSNDPYAFVEFSDHGQASQALQTMNKR 107
Query: 340 ELLGERVVV 366
LL + V
Sbjct: 108 LLLDREMKV 116
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 36.3 bits (80), Expect = 0.017
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 8/71 (11%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 330
V+VG L V + L + F+ FG + D + GYGFV + +A+ A+ ++
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 331 NGKELLGERVV 363
NG + LG R +
Sbjct: 165 NG-QWLGRRTI 174
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 36.3 bits (80), Expect = 0.017
Identities = 28/83 (33%), Positives = 41/83 (49%), Gaps = 8/83 (9%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRI------RDILIKN--GYGFVEFEDYRDADDAVYEL 330
+YVGGL V E L + G + +D + N G+GFVEF DAD A+ L
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 331 NGKELLGERVVVEPARGIDRSAD 399
N +L G+ + V A +++ D
Sbjct: 85 NMIKLYGKPIKVNKASAHEKNMD 107
Score = 36.3 bits (80), Expect = 0.017
Identities = 26/90 (28%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Frame = +1
Query: 163 VGSRVYVGGLPFGVRERDLEKFFKGFGRI-------RDI--LIKNGYGFVEFEDYRDADD 315
VG+ ++VG L V E+ L F FG I RD+ G+ F+ F + +D
Sbjct: 108 VGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDT 167
Query: 316 AVYELNGKELLGERVVVEPARGIDRSADRY 405
A+ +NG+ L + V A D +R+
Sbjct: 168 ALEAMNGQFLCNRAITVSYAFKRDSKGERH 197
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 36.3 bits (80), Expect = 0.017
Identities = 20/68 (29%), Positives = 31/68 (45%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGE 354
+Y+ + V E L + FK + + + Y F+ F + D A+ E NGKEL G
Sbjct: 379 LYIRNIKEAVTEEKLNELFKEYASLDRVKKVKDYAFIHFNERDDCLKAMEEWNGKELEGT 438
Query: 355 RVVVEPAR 378
V A+
Sbjct: 439 VVEASLAK 446
Score = 31.1 bits (67), Expect = 0.63
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 8/68 (11%)
Frame = +1
Query: 166 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 321
G +YVG +P V E L F+ G+I D+ + GY FV + + DA A
Sbjct: 199 GHEIYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAA 258
Query: 322 YELNGKEL 345
+G E+
Sbjct: 259 KTYDGHEI 266
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 36.3 bits (80), Expect = 0.017
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 166 GSRVYVGGLPFGVRERD-LEKFFKGFGRIRDILI---KNGYGFVEFEDYRDADDAVYELN 333
G ++ + G+ GV D L +F+ FG + + I G GFV +ED AD + +
Sbjct: 146 GCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNS 205
Query: 334 GKELLGERVV 363
G+ ++ ER +
Sbjct: 206 GRHIVNERKI 215
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 36.3 bits (80), Expect = 0.017
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 166 GSRVYVGGLPFGVRERD-LEKFFKGFGRIRDILI---KNGYGFVEFEDYRDADDAVYELN 333
G ++ + G+ GV D L +F+ FG + + I G GFV +ED AD + +
Sbjct: 166 GCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNS 225
Query: 334 GKELLGERVV 363
G+ ++ ER +
Sbjct: 226 GRHIVNERKI 235
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 36.3 bits (80), Expect = 0.017
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 4/70 (5%)
Frame = +1
Query: 166 GSRVYVGGLPFGVRERD-LEKFFKGFGRIRDILI---KNGYGFVEFEDYRDADDAVYELN 333
G ++ + G+ GV D L +F+ FG + + I G GFV +ED AD + +
Sbjct: 167 GCKLLLNGITNGVHSVDSLRVYFETFGTLDQVEILGQPRGLGFVIYEDKESADRCLAHNS 226
Query: 334 GKELLGERVV 363
G+ ++ ER +
Sbjct: 227 GRHIVNERKI 236
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 35.9 bits (79), Expect = 0.022
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = +1
Query: 157 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI-------KNGYGFVEFEDYRDADD 315
K G +YV L V + L+K F+ +G I + G+GFV FE +A
Sbjct: 253 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATS 312
Query: 316 AVYELNGKELLGERVVVEPA-RGIDRSA 396
AV E+N K + + + V A R DR A
Sbjct: 313 AVTEMNSKMVCSKPLYVAIAQRKEDRRA 340
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 35.9 bits (79), Expect = 0.022
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = +1
Query: 157 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI-------KNGYGFVEFEDYRDADD 315
K G +YV L V + L+K F+ +G I + G+GFV FE +A
Sbjct: 250 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATS 309
Query: 316 AVYELNGKELLGERVVVEPA-RGIDRSA 396
AV E+N K + + + V A R DR A
Sbjct: 310 AVTEMNSKMVCSKPLYVAIAQRKEDRRA 337
Score = 34.3 bits (75), Expect = 0.068
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 271 GYGFVEFEDYRDADDAVYELNGKELLGERVVV 366
GYGFV FE A +A+ ++NG L G++V V
Sbjct: 98 GYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 129
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 35.9 bits (79), Expect = 0.022
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Frame = +1
Query: 157 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI-------KNGYGFVEFEDYRDADD 315
K G +YV L V + L+K F+ +G I + G+GFV FE +A
Sbjct: 313 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATS 372
Query: 316 AVYELNGKELLGERVVVEPA-RGIDRSA 396
AV E+N K + + + V A R DR A
Sbjct: 373 AVTEMNSKMVCSKPLYVAIAQRKEDRRA 400
Score = 34.3 bits (75), Expect = 0.068
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 271 GYGFVEFEDYRDADDAVYELNGKELLGERVVV 366
GYGFV FE A +A+ ++NG L G++V V
Sbjct: 161 GYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 35.5 bits (78), Expect = 0.029
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 14/94 (14%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDL-----------EKFFKGFGRIRDILIKN---GYGFVEFEDYRDA 309
+VYVG +PF E++L E F G I+ I + G+ FV F+ A
Sbjct: 18 QVYVGNMPFDATEKELNNDALTIYDAIEAVFSVMGPIKSIWMAKRPPGFAFVTFKRTVHA 77
Query: 310 DDAVYELNGKELLGERVVVEPARGIDRSADRYRR 411
DAV LNGK++ VE +D D RR
Sbjct: 78 FDAVKYLNGKKICDLEAKVEMCE-VDFKEDLRRR 110
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 35.1 bits (77), Expect = 0.039
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDI-LIK-NGYGFVEFEDYRDADDAVYELNGKELL 348
VYVG + + E ++ + F FG I ++ K GY FV+FE A A+ ++N ++
Sbjct: 258 VYVGNIA-NLGEDEIRRAFDRFGPINEVRTFKIQGYAFVKFETKESAARAIVQMNNADIG 316
Query: 349 GERV 360
G+ V
Sbjct: 317 GQIV 320
Score = 33.9 bits (74), Expect = 0.090
Identities = 28/90 (31%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 330
V+VG L + L + F FG + + I GYGFV + DA+ A+ E+
Sbjct: 134 VFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRREDAERAIDEM 193
Query: 331 NGKELLGERVVVEPARGIDRSADRYRRGDR 420
NG LG R + D R GDR
Sbjct: 194 NG-AWLGRRTIRTNWATRKPDEDGERGGDR 222
Score = 30.3 bits (65), Expect = 1.1
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 262 IKNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 366
+ + Y FVEF D+ A A+ NG+ELL + + V
Sbjct: 76 LNDPYAFVEFSDHNQATLALQSHNGRELLEKEMHV 110
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 34.7 bits (76), Expect = 0.051
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = +1
Query: 157 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI-------KNGYGFVEFEDYRDADD 315
K G +YV L V + L+K F+ +G I + G+GFV FE +A
Sbjct: 313 KYQGVNLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDENGRSKGFGFVCFEKPEEATS 372
Query: 316 AVYELNGKELLGERVVV 366
AV E+N K + + + V
Sbjct: 373 AVTEMNSKMVCSKPLYV 389
Score = 34.3 bits (75), Expect = 0.068
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 271 GYGFVEFEDYRDADDAVYELNGKELLGERVVV 366
GYGFV FE A +A+ ++NG L G++V V
Sbjct: 161 GYGFVHFETEEAAQNAIQKVNGMLLAGKKVFV 192
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 34.7 bits (76), Expect = 0.051
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVY 324
SR+YVG + F +RE L + F FG I+ I + + FVE+E A A
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 325 ELNGKELLGERVVV 366
+NG+ L G + V
Sbjct: 162 SMNGQMLGGRNLKV 175
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYE 327
RVYV + + E DL+ F+ FG I + G+G++EF + +A+
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 328 LNGKELLGE 354
+N +L G+
Sbjct: 268 MNMFDLGGQ 276
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 34.7 bits (76), Expect = 0.051
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVY 324
SR+YVG + F +RE L + F FG I+ I + + FVE+E A A
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 325 ELNGKELLGERVVV 366
+NG+ L G + V
Sbjct: 162 SMNGQMLGGRNLKV 175
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYE 327
RVYV + + E DL+ F+ FG I + G+G++EF + +A+
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 328 LNGKELLGE 354
+N +L G+
Sbjct: 268 MNMFDLGGQ 276
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 34.7 bits (76), Expect = 0.051
Identities = 25/74 (33%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Frame = +1
Query: 169 SRVYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVY 324
SR+YVG + F +RE L + F FG I+ I + + FVE+E A A
Sbjct: 102 SRIYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQE 161
Query: 325 ELNGKELLGERVVV 366
+NG+ L G + V
Sbjct: 162 SMNGQMLGGRNLKV 175
Score = 30.3 bits (65), Expect = 1.1
Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 8/69 (11%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYE 327
RVYV + + E DL+ F+ FG I + G+G++EF + +A+
Sbjct: 208 RVYVSSVHPDLSETDLKSVFEAFGEIVKCQLARAPTGRGHRGFGYLEFNNLTSQSEAIAG 267
Query: 328 LNGKELLGE 354
+N +L G+
Sbjct: 268 MNMFDLGGQ 276
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.068
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYE 327
+++VGGL + + +F+ FG I DI++ G+GFV F + D A+ +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 328 LNGKELLGERVVVEPARGIDR 390
+ + + V+P R + R
Sbjct: 84 ---RPHIIDGKTVDPKRAVPR 101
Score = 27.5 bits (58), Expect = 7.8
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRD---ILIK-----NGYGFVEFEDYRDADDAVYE 327
R+YV G+ E L ++F +G + IL K G+GFV F+D+ D V +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 34.3 bits (75), Expect = 0.068
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYE 327
+++VGGL + + +F+ FG I DI++ G+GFV F + D A+ +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 328 LNGKELLGERVVVEPARGIDR 390
+ + + V+P R + R
Sbjct: 84 ---RPHIIDGKTVDPKRAVPR 101
Score = 27.5 bits (58), Expect = 7.8
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRD---ILIK-----NGYGFVEFEDYRDADDAVYE 327
R+YV G+ E L ++F +G + IL K G+GFV F+D+ D V +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 34.3 bits (75), Expect = 0.068
Identities = 21/81 (25%), Positives = 39/81 (48%), Gaps = 8/81 (9%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYE 327
+++VGGL + + +F+ FG I DI++ G+GFV F + D A+ +
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 328 LNGKELLGERVVVEPARGIDR 390
+ + + V+P R + R
Sbjct: 84 ---RPHIIDGKTVDPKRAVPR 101
Score = 27.5 bits (58), Expect = 7.8
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRD---ILIK-----NGYGFVEFEDYRDADDAVYE 327
R+YV G+ E L ++F +G + IL K G+GFV F+D+ D V +
Sbjct: 115 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 174
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 33.9 bits (74), Expect = 0.090
Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 8/140 (5%)
Frame = +1
Query: 205 RERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYELNGKELLGERV 360
R RDLE+FF G +RD+ I G +VEF D ++ LNG+ L+G +
Sbjct: 37 RPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWD-EESVPLGLALNGQRLMGAPL 95
Query: 361 VVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVENLSSRISWQDLKD 540
++ A+R R + P + ++VENL +I + ++D
Sbjct: 96 QIQRT-----CAERNRAAN-----SSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRD 145
Query: 541 YMRQAGEVTYADAHKQHRNE 600
G + D E
Sbjct: 146 IFESFGRIEKIDLEVDSNRE 165
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 33.9 bits (74), Expect = 0.090
Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 8/140 (5%)
Frame = +1
Query: 205 RERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYELNGKELLGERV 360
R RDLE+FF G +RD+ I G +VEF D ++ LNG+ L+G +
Sbjct: 182 RPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYVEFWD-EESVPLGLALNGQRLMGAPL 240
Query: 361 VVEPARGIDRSADRYRRGDRHXXXXXXXXXXXXXXPPTRTEYRLIVENLSSRISWQDLKD 540
++ A+R R + P + ++VENL +I + ++D
Sbjct: 241 QIQRT-----CAERNRAAN-----SSVASTLGFVAPGNKGPTHVLVENLHPKIDEKMIRD 290
Query: 541 YMRQAGEVTYADAHKQHRNE 600
G + D E
Sbjct: 291 IFESFGRIEKIDLEVDSNRE 310
>Z77669-6|CAB01243.2| 371|Caenorhabditis elegans Hypothetical
protein T07F10.3 protein.
Length = 371
Score = 33.5 bits (73), Expect = 0.12
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 7/66 (10%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFG----RIRDILIKN---GYGFVEFEDYRDADDAVYELN 333
+++G +P E L + F G +++ + +K+ GY F+EF + +A +Y+LN
Sbjct: 70 LWIGDVPTDWTEETLSQVFTECGHAPYKVKRVYVKDELKGYCFIEFITFDEARQTLYDLN 129
Query: 334 GKELLG 351
G + G
Sbjct: 130 GNRIPG 135
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 33.5 bits (73), Expect = 0.12
Identities = 13/27 (48%), Positives = 20/27 (74%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIR 252
+V+VGGLP V+E D+ FF +GR++
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGRLQ 115
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 33.1 bits (72), Expect = 0.16
Identities = 21/65 (32%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
Frame = +1
Query: 187 GLPFGVRERDLEKFFKG--FGRIRDILI---KNGYGFVEFEDYRDADDAVYELNGKELLG 351
GLPF E+D+ +FF G R++ + NG +VEF++ +A A+ E + KE+
Sbjct: 70 GLPFNATEKDIHEFFAGLTIERVKFVCTTGRPNGEAYVEFKNTEEAGKAM-ENDRKEISN 128
Query: 352 ERVVV 366
+ V
Sbjct: 129 RYIEV 133
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 32.7 bits (71), Expect = 0.21
Identities = 18/75 (24%), Positives = 35/75 (46%), Gaps = 9/75 (12%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIKN---------GYGFVEFEDYRDADDAVY 324
R+ + LPF ++ DL+ G+ +I++ G+GF++F + DA+
Sbjct: 96 RLIIRNLPFKTKKEDLQNLCSNIGKFVEIVLPPSRKDPKTCAGFGFIQFVEKADAEKGRE 155
Query: 325 ELNGKELLGERVVVE 369
N ++LG V +
Sbjct: 156 FFNTNKVLGRSVAAD 170
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 32.3 bits (70), Expect = 0.27
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 8/65 (12%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKN-------GYGFVEFEDYRDADDAVYEL 330
+Y+GGL + + E D+ F +G + +I LI++ G+ F+ ++D R AV
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQRSTILAVDNF 99
Query: 331 NGKEL 345
NG L
Sbjct: 100 NGISL 104
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 32.3 bits (70), Expect = 0.27
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 6/85 (7%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRI-----RDILIKNG-YGFVEFEDYRDADDAVYELNG 336
+YV V E LE+ F G + RD+ N + VEFED A+ +NG
Sbjct: 15 IYVANFSEEVDEELLEELFIQAGPVVKVILRDVRDSNAKFALVEFEDELSVLFAIELMNG 74
Query: 337 KELLGERVVVEPARGIDRSADRYRR 411
L + + V+P G ++ + Y+R
Sbjct: 75 VRLFNQELQVKPRNGTNQE-ELYKR 98
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 31.9 bits (69), Expect = 0.36
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV-- 321
++++GGL + +L +F FG + + ++ G+GF+ F D D +
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 322 --YELNGKEL 345
+EL+GK++
Sbjct: 106 REHELDGKKI 115
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 31.9 bits (69), Expect = 0.36
Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV-- 321
++++GGL + +L +F FG + + ++ G+GF+ F D D +
Sbjct: 46 KMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKVLNN 105
Query: 322 --YELNGKEL 345
+EL+GK++
Sbjct: 106 REHELDGKKI 115
>Z81084-7|CAB03111.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.63
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGF----GRIRDILIKNG-----YGFVEFEDYRDADDAVYE 327
++V GLP + R+L F+G G + + KNG GFV F +DA DA
Sbjct: 33 LFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQDARKM 92
Query: 328 LNG 336
L G
Sbjct: 93 LQG 95
>Z81037-10|CAB02754.1| 312|Caenorhabditis elegans Hypothetical
protein F46A9.6 protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.63
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGF----GRIRDILIKNG-----YGFVEFEDYRDADDAVYE 327
++V GLP + R+L F+G G + + KNG GFV F +DA DA
Sbjct: 33 LFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQDARKM 92
Query: 328 LNG 336
L G
Sbjct: 93 LQG 95
>Z36238-4|CAD82915.1| 286|Caenorhabditis elegans Hypothetical
protein R74.5b protein.
Length = 286
Score = 31.1 bits (67), Expect = 0.63
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = +1
Query: 271 GYGFVEFEDYRDADDAVYELNGKELLGERVVVEPA 375
G+GFV ++ DAD A E NG + G RV V A
Sbjct: 22 GFGFVTMQNPDDADRARAEFNGTTIEGRRVEVNLA 56
>X95609-1|CAA64867.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.63
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGF----GRIRDILIKNG-----YGFVEFEDYRDADDAVYE 327
++V GLP + R+L F+G G + + KNG GFV F +DA DA
Sbjct: 33 LFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQDARKM 92
Query: 328 LNG 336
L G
Sbjct: 93 LQG 95
>X95608-1|CAA64866.1| 312|Caenorhabditis elegans mec-8 protein.
Length = 312
Score = 31.1 bits (67), Expect = 0.63
Identities = 22/63 (34%), Positives = 30/63 (47%), Gaps = 9/63 (14%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGF----GRIRDILIKNG-----YGFVEFEDYRDADDAVYE 327
++V GLP + R+L F+G G + + KNG GFV F +DA DA
Sbjct: 33 LFVSGLPMDAKPRELYLLFRGCRGYEGALLKMTSKNGKPTSPVGFVTFLSQQDAQDARKM 92
Query: 328 LNG 336
L G
Sbjct: 93 LQG 95
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKN------GYGFVEFEDYRDADDAVYE 327
++VG +P V+ER++ F+ G++ ++ IK Y FV F+ A A E
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKN------GYGFVEFEDYRDADDAVYE 327
++VG +P V+ER++ F+ G++ ++ IK Y FV F+ A A E
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 227
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 31.1 bits (67), Expect = 0.63
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 6/57 (10%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDILIKN------GYGFVEFEDYRDADDAVYE 327
++VG +P V+ER++ F+ G++ ++ IK Y FV F+ A A E
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDIKTPINTDAAYAFVMFQTVDQAIQAKAE 204
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 30.7 bits (66), Expect = 0.84
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Frame = +1
Query: 208 ERDLEKFFKGFGRIRDILIKNGYGFVEFEDYRDADDAVYELNGKELLGERVV-VEPARGI 384
+ +L+KF RD G+ +V FE+ + + A+ LNG + G RV+ V A+
Sbjct: 33 DEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNTAISGLNGAD-FGNRVLKVNRAQQR 91
Query: 385 DRSADRYRRGDR 420
DRS RG R
Sbjct: 92 DRSDRGGGRGGR 103
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 271 GYGFVEFEDYRDADDAVYELNGKELLGERVVV 366
GYGFV FE A A+ ++NG L ++V V
Sbjct: 186 GYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 30.7 bits (66), Expect = 0.84
Identities = 14/32 (43%), Positives = 19/32 (59%)
Frame = +1
Query: 271 GYGFVEFEDYRDADDAVYELNGKELLGERVVV 366
GYGFV FE A A+ ++NG L ++V V
Sbjct: 186 GYGFVHFETEHSAQTAIEKVNGMLLSDKKVYV 217
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 30.7 bits (66), Expect = 0.84
Identities = 20/76 (26%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRI------RDILIK--NGYGFVEFEDYRDADDAVYEL 330
V++G + F ++E+ FKG G+I +D K + ++EF+D ++A+ +
Sbjct: 57 VFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALV-M 115
Query: 331 NGKELLGERVVVEPAR 378
NG +VV R
Sbjct: 116 NGSLFRSRPIVVTAKR 131
>AL033514-34|CAA22113.1| 463|Caenorhabditis elegans Hypothetical
protein Y75B8A.35b protein.
Length = 463
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 265 KNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 366
+NGYGFV+F+ + Y N E L +R+ +
Sbjct: 129 ENGYGFVDFQPFAQQQQPAYNGNEPEFLIQRMQI 162
>AL033514-33|CAB54500.1| 480|Caenorhabditis elegans Hypothetical
protein Y75B8A.35a protein.
Length = 480
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 265 KNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 366
+NGYGFV+F+ + Y N E L +R+ +
Sbjct: 146 ENGYGFVDFQPFAQQQQPAYNGNEPEFLIQRMQI 179
>AF160493-1|AAD43348.1| 465|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 465
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 265 KNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 366
+NGYGFV+F+ + Y N E L +R+ +
Sbjct: 146 ENGYGFVDFQPFAQQQQPAYNGNEPEFLIQRMQI 179
>AF160492-1|AAD43347.1| 463|Caenorhabditis elegans DNA-binding
protein ZIP-1 protein.
Length = 463
Score = 30.3 bits (65), Expect = 1.1
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +1
Query: 265 KNGYGFVEFEDYRDADDAVYELNGKELLGERVVV 366
+NGYGFV+F+ + Y N E L +R+ +
Sbjct: 129 ENGYGFVDFQPFAQQQQPAYNGNEPEFLIQRMQI 162
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/90 (25%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Frame = +1
Query: 154 WKMVGSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDA 309
W RV+ G L V + L K F+ + + + GYGFV F D D
Sbjct: 198 WDENDFRVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDY 257
Query: 310 DDAVYELNGKELLGERVVVEPARGIDRSAD 399
A+ E++GK + + + + +R+ D
Sbjct: 258 VRAMREMDGKYVGNRPIKLRKSAWKERNID 287
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKNGY 276
+++VG +P + E+DL F+ FG+I + ++K+ Y
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKY 65
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 29.9 bits (64), Expect = 1.5
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 8/76 (10%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRI------RDILIK--NGYGFVEFEDYRDADDAVYEL 330
V++G + F ++E+ FKG G I +D K + ++EF+D ++A+ +
Sbjct: 63 VFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALV-M 121
Query: 331 NGKELLGERVVVEPAR 378
NG +VV R
Sbjct: 122 NGSLFRSRPIVVTAKR 137
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 29.9 bits (64), Expect = 1.5
Identities = 12/36 (33%), Positives = 24/36 (66%), Gaps = 1/36 (2%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDI-LIKNGY 276
+++VG +P + E+DL F+ FG+I + ++K+ Y
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKY 65
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 8/75 (10%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRDILIK--------NGYGFVEFEDYRDADDAVYE 327
R+++ LP+ +E DL+ FK +G + ++ + G+ VEF A A
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFPEAAVAAYSA 339
Query: 328 LNGKELLGERVVVEP 372
L+G G + + P
Sbjct: 340 LDGYVFKGRMMHILP 354
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 29.5 bits (63), Expect = 1.9
Identities = 18/70 (25%), Positives = 35/70 (50%), Gaps = 8/70 (11%)
Frame = +1
Query: 175 VYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAVYEL 330
V + +PFG E++L +F+ FG + I + G+ +V F++ A+ A +
Sbjct: 34 VKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIAAESM 93
Query: 331 NGKELLGERV 360
NG + +R+
Sbjct: 94 NGYLMFEQRL 103
>U80455-2|AAB37882.2| 420|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform b protein.
Length = 420
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 166 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 321
G+ +++ LP + DL F FG I + +GFV +E+ + A +A+
Sbjct: 334 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 393
Query: 322 YELNGKELLGERVVVE 369
+NG ++ +R+ V+
Sbjct: 394 SAMNGFQIGSKRLKVQ 409
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 166 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 321
G+ +++ LP + DL F FG I + +GFV +E+ + A +A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 322 YELNGKELLGERVVVE 369
+NG ++ +R+ V+
Sbjct: 558 SAMNGFQIGSKRLKVQ 573
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 166 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 321
G+ +++ LP + DL F FG I + +GFV +E+ + A +A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 322 YELNGKELLGERVVVE 369
+NG ++ +R+ V+
Sbjct: 558 SAMNGFQIGSKRLKVQ 573
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 166 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 321
G+ +++ LP + DL F FG I + +GFV +E+ + A +A+
Sbjct: 427 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 486
Query: 322 YELNGKELLGERVVVE 369
+NG ++ +R+ V+
Sbjct: 487 SAMNGFQIGSKRLKVQ 502
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 29.5 bits (63), Expect = 1.9
Identities = 19/76 (25%), Positives = 37/76 (48%), Gaps = 8/76 (10%)
Frame = +1
Query: 166 GSRVYVGGLPFGVRERDLEKFFKGFGRIRDILI--------KNGYGFVEFEDYRDADDAV 321
G+ +++ LP + DL F FG I + +GFV +E+ + A +A+
Sbjct: 498 GANLFIYHLPQDFGDSDLINTFAPFGGILSAKVFIDKVTNLSKCFGFVSYENAQSATNAI 557
Query: 322 YELNGKELLGERVVVE 369
+NG ++ +R+ V+
Sbjct: 558 SAMNGFQIGSKRLKVQ 573
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 490 LIVENLSSRISWQDLKDYMRQAGEVTYAD 576
+I+ NL S +WQ ++D +R GEV D
Sbjct: 387 IIIRNLPSDYTWQIVRDRVRNFGEVDSVD 415
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 28.7 bits (61), Expect = 3.4
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 8/80 (10%)
Frame = +1
Query: 157 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRIR--------DILIKNGYGFVEFEDYRDAD 312
K G VY+ + + + LE +FK +G I+ D + G+ + F D +D
Sbjct: 21 KNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITF-DSKDGA 79
Query: 313 DAVYELNGKELLGERVVVEP 372
+ E + G+RV VEP
Sbjct: 80 NKAIEQRPHVIDGDRVDVEP 99
>Z50176-3|CAA90540.1| 196|Caenorhabditis elegans Hypothetical
protein C09G1.3 protein.
Length = 196
Score = 28.7 bits (61), Expect = 3.4
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = -3
Query: 327 LVHSIICISV-IFKFNKTISILDKYVSDSSKTFEELFQVSLSYSKGETTN 181
L +++C +F+F + I ILD+Y+ SK L VS +GE +N
Sbjct: 81 LPRNVVCSGAELFQFAEKIRILDEYL--KSKDLTLLQDVSKQIKRGENSN 128
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +1
Query: 208 ERDLEKFFKGFGRIRDILI----KNG----YGFVEFEDYRDADDAVYELNGKELLGERVV 363
+ DLE F FG+I + I ++G Y F+EF++ + + A ++++ + R+
Sbjct: 254 DEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIH 313
Query: 364 VEPARGIDRS 393
V+ ++ + ++
Sbjct: 314 VDFSQSVSQN 323
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +1
Query: 208 ERDLEKFFKGFGRIRDILI----KNG----YGFVEFEDYRDADDAVYELNGKELLGERVV 363
+ DLE F FG+I + I ++G Y F+EF++ + + A ++++ + R+
Sbjct: 254 DEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIH 313
Query: 364 VEPARGIDRS 393
V+ ++ + ++
Sbjct: 314 VDFSQSVSQN 323
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 28.3 bits (60), Expect = 4.5
Identities = 16/70 (22%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
Frame = +1
Query: 208 ERDLEKFFKGFGRIRDILI----KNG----YGFVEFEDYRDADDAVYELNGKELLGERVV 363
+ DLE F FG+I + I ++G Y F+EF++ + + A ++++ + R+
Sbjct: 185 DEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIH 244
Query: 364 VEPARGIDRS 393
V+ ++ + ++
Sbjct: 245 VDFSQSVSQN 254
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +1
Query: 157 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRI 249
++V ++V+VGG+ + + + KFF FG +
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTV 231
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +1
Query: 157 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRI 249
++V ++V+VGG+ + + + KFF FG +
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTV 231
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 27.9 bits (59), Expect = 5.9
Identities = 10/31 (32%), Positives = 20/31 (64%)
Frame = +1
Query: 157 KMVGSRVYVGGLPFGVRERDLEKFFKGFGRI 249
++V ++V+VGG+ + + + KFF FG +
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTV 231
>Z66512-2|CAA91323.1| 387|Caenorhabditis elegans Hypothetical
protein F52H3.3 protein.
Length = 387
Score = 27.5 bits (58), Expect = 7.8
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +1
Query: 268 NGYGFVEFEDYRDADDAVYELNGKELLGERVVVEPARGIDRSADRYRRG 414
N +GF F + D +++ Y N + RVVV+ G+ R+ +Y G
Sbjct: 174 NNWGFPSFMAWEDVNNSNYVRNEMVTVTARVVVQKVLGV-RNVPKYDFG 221
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 27.5 bits (58), Expect = 7.8
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRI 249
+V++GGLP V E + F FG++
Sbjct: 246 KVFIGGLPIDVSEEQVWATFGAFGKV 271
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 27.5 bits (58), Expect = 7.8
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRD---ILIK-----NGYGFVEFEDYRDADDAVYE 327
R+YV G+ E L ++F +G + IL K G+GFV F+D+ D V +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 27.5 bits (58), Expect = 7.8
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Frame = +1
Query: 172 RVYVGGLPFGVRERDLEKFFKGFGRIRD---ILIK-----NGYGFVEFEDYRDADDAVYE 327
R+YV G+ E L ++F +G + IL K G+GFV F+D+ D V +
Sbjct: 77 RLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQ 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,835,260
Number of Sequences: 27780
Number of extensions: 212715
Number of successful extensions: 864
Number of sequences better than 10.0: 118
Number of HSP's better than 10.0 without gapping: 759
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 833
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1289949676
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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