Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmov11j23
(608 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22180-1|CAA80176.2| 371|Caenorhabditis elegans Hypothetical pr... 182 2e-46
Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical pr... 172 1e-43
Z22180-10|CAO82052.1| 360|Caenorhabditis elegans Hypothetical p... 169 2e-42
Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical pr... 131 3e-31
Z22180-9|CAO82051.1| 304|Caenorhabditis elegans Hypothetical pr... 97 9e-21
>Z22180-1|CAA80176.2| 371|Caenorhabditis elegans Hypothetical
protein K11H3.1a protein.
Length = 371
Score = 182 bits (442), Expect = 2e-46
Identities = 91/170 (53%), Positives = 118/170 (69%), Gaps = 1/170 (0%)
Frame = +2
Query: 101 FKYFVRDCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEE 277
F+YF I M+ K KV I+GSGNWGSAIA+IVG S + F+ V MWV+EE
Sbjct: 9 FRYFGTTSTIATMSPK----KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEE 64
Query: 278 IIEGKKLTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICS 457
I+ G+KL+E+IN HEN+KYLPG LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC
Sbjct: 65 IVNGEKLSEVINNRHENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICE 124
Query: 458 TLLGKIKPTAAALSLIKGFDIAEGGGIDLISHIITRCLKIPCAVLMGANI 607
L+GKI A+SLIKG + GG+ LIS I LKI +VLMGAN+
Sbjct: 125 KLVGKIPADTQAISLIKGVSTEKRGGLKLISEEIKEILKIEVSVLMGANL 174
>Z22180-2|CAD54146.1| 392|Caenorhabditis elegans Hypothetical
protein K11H3.1b protein.
Length = 392
Score = 172 bits (419), Expect = 1e-43
Identities = 93/179 (51%), Positives = 120/179 (67%), Gaps = 10/179 (5%)
Frame = +2
Query: 101 FKYFVRDCNILDMADKQPKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEE 277
F+YF I M+ K KV I+GSGNWGSAIA+IVG S + F+ V MWV+EE
Sbjct: 21 FRYFGTTSTIATMSPK----KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEE 76
Query: 278 IIEGKKLTEIINETHENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICS 457
I+ G+KL+E+IN HEN+KYLPG LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC
Sbjct: 77 IVNGEKLSEVINNRHENIKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICE 136
Query: 458 TLLGKIKPTAAALSLIKG--FD-------IAEGGGIDLISHIITRCLKIPCAVLMGANI 607
L+GKI A+SLIKG FD + GG+ LIS I LKI +VLMGAN+
Sbjct: 137 KLVGKIPADTQAISLIKGISFDKTNQGVSTEKRGGLKLISEEIKEILKIEVSVLMGANL 195
>Z22180-10|CAO82052.1| 360|Caenorhabditis elegans Hypothetical
protein K11H3.1d protein.
Length = 360
Score = 169 bits (410), Expect = 2e-42
Identities = 89/162 (54%), Positives = 114/162 (70%), Gaps = 10/162 (6%)
Frame = +2
Query: 152 PKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIINETHEN 328
PK KV I+GSGNWGSAIA+IVG S + F+ V MWV+EEI+ G+KL+E+IN HEN
Sbjct: 3 PK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHEN 61
Query: 329 VKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSLIK 508
+KYLPG LP+NVVAV D+VE+ + +++L+FVVPHQFV+ IC L+GKI A+SLIK
Sbjct: 62 IKYLPGKVLPNNVVAVTDLVESCEGSNVLVFVVPHQFVKGICEKLVGKIPADTQAISLIK 121
Query: 509 G--FD-------IAEGGGIDLISHIITRCLKIPCAVLMGANI 607
G FD + GG+ LIS I LKI +VLMGAN+
Sbjct: 122 GISFDKTNQGVSTEKRGGLKLISEEIKEILKIEVSVLMGANL 163
>Z99171-3|CAB16310.1| 374|Caenorhabditis elegans Hypothetical
protein F47G4.3 protein.
Length = 374
Score = 131 bits (317), Expect = 3e-31
Identities = 72/158 (45%), Positives = 96/158 (60%), Gaps = 7/158 (4%)
Frame = +2
Query: 155 KNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGK---KLTEIINETH 322
+ K+ IVG GNWGSAIA +VG+ + F+ V++W + G + E IN TH
Sbjct: 21 RKKIAIVGGGNWGSAIACVVGKTVKAQDEVFQPIVSIWCRDSRKPGDLSPSIAETINSTH 80
Query: 323 ENVKYLPGHKLPSNVVAVPDVVEAAKDADLLIFVVPHQFVRTICSTLLGKIKPTAAALSL 502
EN KYLPG ++P NVVA ++EA + A +LI VVPHQ + IC L GK++ A A+SL
Sbjct: 81 ENPKYLPGRRIPDNVVATSSLLEACQSAHILILVVPHQGIPQICDELRGKLQKGAHAISL 140
Query: 503 IKGFDIA-EGGGI--DLISHIITRCLKIPCAVLMGANI 607
KG + E G I LIS I R L + C+VLMGAN+
Sbjct: 141 TKGISSSCENGEIKMQLISEDIERALGVQCSVLMGANL 178
>Z22180-9|CAO82051.1| 304|Caenorhabditis elegans Hypothetical
protein K11H3.1c protein.
Length = 304
Score = 97.1 bits (231), Expect = 9e-21
Identities = 45/73 (61%), Positives = 56/73 (76%), Gaps = 1/73 (1%)
Frame = +2
Query: 152 PKNKVCIVGSGNWGSAIAKIVGRNAASLSN-FEDRVTMWVYEEIIEGKKLTEIINETHEN 328
PK KV I+GSGNWGSAIA+IVG S + F+ V MWV+EEI+ G+KL+E+IN HEN
Sbjct: 3 PK-KVTIIGSGNWGSAIARIVGSTTKSFPDEFDPTVRMWVFEEIVNGEKLSEVINNRHEN 61
Query: 329 VKYLPGHKLPSNV 367
+KYLPG LP+NV
Sbjct: 62 IKYLPGKVLPNNV 74
Score = 31.9 bits (69), Expect = 0.37
Identities = 16/33 (48%), Positives = 20/33 (60%)
Frame = +2
Query: 509 GFDIAEGGGIDLISHIITRCLKIPCAVLMGANI 607
G + GG+ LIS I LKI +VLMGAN+
Sbjct: 75 GVSTEKRGGLKLISEEIKEILKIEVSVLMGANL 107
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,165,702
Number of Sequences: 27780
Number of extensions: 226483
Number of successful extensions: 748
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 720
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 740
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1311096392
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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