Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmov11j22
         (528 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73102-4|CAA97408.1|  203|Caenorhabditis elegans Hypothetical pr...    40   0.001
Z81499-2|CAB04088.1|  598|Caenorhabditis elegans Hypothetical pr...    29   1.6  
AY494976-1|AAR87493.1|  598|Caenorhabditis elegans UNC-122 protein.    29   1.6  
Z83238-5|CAB05796.1|  304|Caenorhabditis elegans Hypothetical pr...    28   3.6  
AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical ...    28   4.8  
AC084197-32|AAK68593.1|  197|Caenorhabditis elegans Hypothetical...    28   4.8  
AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical...    27   6.3  
Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical pr...    27   8.3  
Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical pr...    27   8.3  
AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPas...    27   8.3  
AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical ...    27   8.3  

>Z73102-4|CAA97408.1|  203|Caenorhabditis elegans Hypothetical
           protein B0035.3 protein.
          Length = 203

 Score = 39.9 bits (89), Expect = 0.001
 Identities = 24/73 (32%), Positives = 33/73 (45%)
 Frame = +1

Query: 304 RLAIWQGDITSLRVDAITNTTDETLTESNEVSDRIMQVAGPDLKEEIILRAHECPHRRGG 483
           R+++W GDIT L VDAI N  +  L     V   I + AG    +E   + + C      
Sbjct: 25  RISVWDGDITKLSVDAIVNAANSRLAGGGGVDGAIHRAAGRKQLQEECQQYNGC----AV 80

Query: 484 GDAGVRSAVPARH 522
           GDA + S     H
Sbjct: 81  GDAVITSGCNINH 93


>Z81499-2|CAB04088.1|  598|Caenorhabditis elegans Hypothetical
           protein F11C3.2 protein.
          Length = 598

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +1

Query: 169 GMRAPGECWSVPRWSQTVAPPPADYSNCT--PLHAQP 273
           GM  PG    +PR+S TV PPP      T  P+H  P
Sbjct: 222 GMPKPGRTRKLPRYS-TVRPPPTPKRKTTQSPIHVVP 257


>AY494976-1|AAR87493.1|  598|Caenorhabditis elegans UNC-122 protein.
          Length = 598

 Score = 29.5 bits (63), Expect = 1.6
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
 Frame = +1

Query: 169 GMRAPGECWSVPRWSQTVAPPPADYSNCT--PLHAQP 273
           GM  PG    +PR+S TV PPP      T  P+H  P
Sbjct: 222 GMPKPGRTRKLPRYS-TVRPPPTPKRKTTQSPIHVVP 257


>Z83238-5|CAB05796.1|  304|Caenorhabditis elegans Hypothetical
           protein T08G3.6 protein.
          Length = 304

 Score = 28.3 bits (60), Expect = 3.6
 Identities = 19/51 (37%), Positives = 25/51 (49%), Gaps = 10/51 (19%)
 Frame = +1

Query: 193 WSVPRWSQTVA---PPPADY-----SNCTPLHAQPVFLHDD--AINDRLAI 315
           W   RW+  V    P  +DY     SNC   H + +FL+ D   +N RLAI
Sbjct: 241 WKYYRWTNAVRYVKPGRSDYVGIKISNCEAAHEKKIFLYCDRETLNYRLAI 291


>AF047653-6|AAC04462.2|  463|Caenorhabditis elegans Hypothetical
           protein W02F12.5 protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 23/72 (31%), Positives = 35/72 (48%)
 Frame = +1

Query: 199 VPRWSQTVAPPPADYSNCTPLHAQPVFLHDDAINDRLAIWQGDITSLRVDAITNTTDETL 378
           +P+ +  VA PP+  S+ TP+ A PV         R+ + +G   S    AIT   DE  
Sbjct: 188 IPKSAPPVARPPSTPSSSTPVGAVPV--------TRVVVPKGVDPS---HAITGARDEVR 236

Query: 379 TESNEVSDRIMQ 414
            ++N +  RI Q
Sbjct: 237 VKANRMRMRIAQ 248


>AC084197-32|AAK68593.1|  197|Caenorhabditis elegans Hypothetical
           protein Y73B6BL.23 protein.
          Length = 197

 Score = 27.9 bits (59), Expect = 4.8
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = +1

Query: 127 NINLENSAKDSSVCGMRAPGECWSVPRWSQTVAPPPADYSNC 252
           N N  N++ DSS+CG+    E    P+W   + P      NC
Sbjct: 140 NENGTNNSNDSSICGIMEEFEELVYPQWVYYLYPLIPTAPNC 181


>AC084158-36|AAK68577.1| 1219|Caenorhabditis elegans Hypothetical
            protein Y69A2AR.31 protein.
          Length = 1219

 Score = 27.5 bits (58), Expect = 6.3
 Identities = 12/36 (33%), Positives = 17/36 (47%)
 Frame = +1

Query: 217  TVAPPPADYSNCTPLHAQPVFLHDDAINDRLAIWQG 324
            T APPP +  N    + + +F H  AI  +   W G
Sbjct: 944  THAPPPMEGCNTKDANGREIFTHIGAIMRKYVDWSG 979


>Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical
           protein K11D9.2b protein.
          Length = 1004

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 12  NKKSSLMNAC*YLKQYLYK*ITALCVCVWFIVIKKFN 122
           N+K+ L        + L K I+ +CV VW I I  FN
Sbjct: 246 NEKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFN 282


>Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical
           protein K11D9.2a protein.
          Length = 1059

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 12  NKKSSLMNAC*YLKQYLYK*ITALCVCVWFIVIKKFN 122
           N+K+ L        + L K I+ +CV VW I I  FN
Sbjct: 246 NEKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFN 282


>AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPase
           protein.
          Length = 1059

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 14/37 (37%), Positives = 19/37 (51%)
 Frame = +3

Query: 12  NKKSSLMNAC*YLKQYLYK*ITALCVCVWFIVIKKFN 122
           N+K+ L        + L K I+ +CV VW I I  FN
Sbjct: 246 NEKTPLQQKLDEFGEQLSKVISVICVAVWAINIGHFN 282


>AF106591-4|AAO61422.1| 1217|Caenorhabditis elegans Hypothetical
           protein T01A4.1a protein.
          Length = 1217

 Score = 27.1 bits (57), Expect = 8.3
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +1

Query: 376 LTESNEVSDRIMQVAGPDLKEEIILRAHE 462
           L+E++ +S+ I+  A PD   EI+L AH+
Sbjct: 233 LSEASVMSNLIILCASPDTVREIMLAAHD 261


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,473,002
Number of Sequences: 27780
Number of extensions: 195506
Number of successful extensions: 678
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 656
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 678
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1038911524
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)